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KJC3_012993-T1, KJC3_012993-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012993-T1
Unique NameKJC3_012993-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at JC18F:101787..103898+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012993-T1 ID=KJC3_012993-T1|Name=KJC3_012993-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2112bp|location=Sequence derived from alignment at JC18F:101787..103898+ (Aspergillus niger KJC3)
TCGTTAGGTCCGTCTACCATTGCATTGAAATCTTTCGCATTAGTTTTTCC
CCACGACAACAGAACCATGGGATCCGAACTTGGGGTCACTGCCGCATCCA
CGCCCCAGCCAGCCTATATTGCGGTCAGTATATGGTGGGCCTGCTGGGCG
GGTACCTGGACGGTTGTTGTTGCGTCTGGCATGGCCTATCTCATCGCCCA
TCGCAACACGCCTCCACTCCTGCTGCGAGGCCTCGGACTTTCGCTGTCCG
CTGTTGTTATGCTTCATGTCTATTGGACTTCAGTGCAATTTGGAACCATG
ATTGGCACCATCATGCCCGGAGATGCCGAGTACTGGATCATGGGCACCTA
TCTGCCGTGTGGCATTGCCCTGTTCCACGCATCGAATAGTCGCTTCTACC
ATGTGGCGAAGCTTCAGGAGGGCTATATTATTCGTAGTAGTGGTGGGATT
CATTTGTCCTCCACCTCGAGGGGCAAGCTCGGTGTCGTAGACCGGTTCCG
TCGCCTTGCCTACACCACCAAGATCCTCGTGCTTGTTACGATGGCATCGC
TCGTTCAGGTAAAACGGCCACCGTCTACCCCTACTGCCACCGCATCAGTG
TCTAATCGAATCAATAGGTGTTCCTCACGGTCTCGATGTGGCTTATCTCT
CGCAAATGGCACCGTACTTGGGGGATTCCAGGCACCGAGGTCCATGGGAC
CGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTAAGAAC
GCTTCTGACATACGCCCGGCGCATATGCGACAAGAGTTGCACGCTAATTG
ATATGCAGGTGGCCTGGCGTGTTTGGACAGGTTTTCTGGTCGTGGATTGT
GGGCCCCGTCGTTCTCTGGAAATCCCGTCACATCCACGACACCCACGGCT
GGAGAGTCCAGACGATGGGCTGCATCATCGCCAAGTGAGCCAGTCGGACC
GATGAGGCCTGTGGAACGGCTAACCCGTTATGTAGTCTCCCTGCGACGCC
GATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGGTCTGTCAGT
ACTGGTTACCGCCCCAGTGGTAGGTGCTCCGAGCTGTGACCAACAGGAAA
ATAGAAATGAAGAAGAAAAGAAGCAAGAAAACGTGGCTGACGTCTGTAGG
ATCTGCCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTG
CCGAGAGGTAATGCGCCATCACGCTATCCAACAAGGGGCCTTCGATTCGA
TCGCACGGTGGGAACCCAATACCAATCCCTTTGCTGATGGCACCATGGCC
CGCAGGTCAGCCTCCATTCTTGTCGAGCTCACAGGGTCTGGCCGGGAATC
ATGGAGTAGATCTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCA
CCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGCTGCAG
GATTTCTCCGCCCATTGCGACTTTTCCGGAGAGAATATAGCTTTCCTGAC
CCGAGTGGCAGAATGGAAGAGCTCGCTGCCCCATACGGTCTGGGATAGCA
GGATTTCAGACTATGGAGATCTTACCGACTTGATTCGGGAGCAGTTTCAC
CGCGCGCTGTGTATTTACACGACCTTCATCAGTGATCGCCATGCGCAGTT
ACCGATCAACGTCTCTTCGCAGGAACGGAAGGAGCTGGAGAACGTCTTTG
AGGGCCCTGCTGGGCTTCTCTTCGGAGACGGGCGCCCGACCAATCCCGCC
GTTCCGTTCGATTCGCCAGGCTATGGCCCCACGCCCTCAGCGTCTCCGAT
CGCCTCCATAAAGGGCGAGTCCGGTTCGCTATTCGCCGACAATGGCCAGG
TAAAATACTGGGGCGAGGTTCCCCAAACATTCAATGCGACGGTCTTTGAC
CGAGCCGAGGAGAGCATCAAGTACCTCGTTCTCACCAACACGTGGCCGAA
GTTTGTTCGAAGCCGCGGGATCGCAGCTGAGGTTGATTTGCTGGCGGGGA
GCGAGAGTCCTGCGTAGCTGGTTCCGGAATGAGGTCGCCAGCGATGGGAG
ATTGGACTGCATGGCATCTGTCTGGGATGTTGATAAAATACCATAGATAA
ATATGTTGGAGC
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Coding sequence (CDS) from alignment at JC18F:101787..103898+

>KJC3_012993-T1 ID=KJC3_012993-T1|Name=KJC3_012993-T1|organism=Aspergillus niger KJC3|type=CDS|length=846bp|location=Sequence derived from alignment at JC18F:101787..103898+ (Aspergillus niger KJC3)
ATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGAGAGGTAATGCGCCATCA
CGCTATCCAACAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCCAATA
CCAATCCCTTTGCTGATGGCACCATGGCCCGCAGGTCAGCCTCCATTCTT
GTCGAGCTCACAGGGTCTGGCCGGGAATCATGGAGTAGATCTCTTGGCTC
CAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTG
TCTTGGCGCGCAATCCTGCCCCGCTGCAGGATTTCTCCGCCCATTGCGAC
TTTTCCGGAGAGAATATAGCTTTCCTGACCCGAGTGGCAGAATGGAAGAG
CTCGCTGCCCCATACGGTCTGGGATAGCAGGATTTCAGACTATGGAGATC
TTACCGACTTGATTCGGGAGCAGTTTCACCGCGCGCTGTGTATTTACACG
ACCTTCATCAGTGATCGCCATGCGCAGTTACCGATCAACGTCTCTTCGCA
GGAACGGAAGGAGCTGGAGAACGTCTTTGAGGGCCCTGCTGGGCTTCTCT
TCGGAGACGGGCGCCCGACCAATCCCGCCGTTCCGTTCGATTCGCCAGGC
TATGGCCCCACGCCCTCAGCGTCTCCGATCGCCTCCATAAAGGGCGAGTC
CGGTTCGCTATTCGCCGACAATGGCCAGGTAAAATACTGGGGCGAGGTTC
CCCAAACATTCAATGCGACGGTCTTTGACCGAGCCGAGGAGAGCATCAAG
TACCTCGTTCTCACCAACACGTGGCCGAAGTTTGTTCGAAGCCGCGGGAT
CGCAGCTGAGGTTGATTTGCTGGCGGGGAGCGAGAGTCCTGCGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012993KJC3_012993Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012993-T1.utr5p1KJC3_012993-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012993-T1.exon1KJC3_012993-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012993-T1.cdsKJC3_012993-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012993-T1.utr3p1KJC3_012993-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012993-T1KJC3_012993-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036305
DBxrefInterPro:IPR016137
DBxrefPFAM:PF00615
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
JC18FsupercontigJC18F:101787..103898 +
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