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KJC3_012996-T3, KJC3_012996-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012996-T3
Unique NameKJC3_012996-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:3039438..3042165-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012996-T3 ID=KJC3_012996-T3|Name=KJC3_012996-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2728bp|location=Sequence derived from alignment at ch1:3039438..3042165- (Aspergillus niger KJC3)
GTTCAGGGCAGGCGAGTGCTGCAACTCCGACTTATTTTGATTTCAAGTAT
ATGTACCTTTCCAGACACCGCACGTCGGCCCCAGGTATACTCCGCCAATT
CCTTTCCAATGGTCCAATCCTGAAATCGCCAACGGCCTCTACTAGATACT
CCGCATCGCGAACTTCGTCGGTTGGAGAGGAAGCTGTGATGTTCAAGAAA
GCCGTCAAGGAACATTCAGTAGCGTCAGCGACTCCGCTACAGTCCACGCT
TACGCGCAGCAATAATGGAAGTGCTTCGATGAGACCCCCGCCGCCGTCCA
CAGGGGTTAAGCGCAAGATTGAGATGGCTACCGTGCGAGAGTCTAATCTG
GGGTCCCTCCACGACGGTGTCTACTTCGATGAGAACGACTTCGACGACGA
TGACGACCTGGACTTTGAGGAACCCGATCCATTCATTCCCCCTGCCCCCA
TAACCAGACCGAGCGTCCCGAAATCCGAACCGCCCAAGTACCCGTCCCTC
CATGACATAGCTGCGCAAGAGGAAGATATACCGATAGTCGACTTGACTTC
GCCGAGCAAGGTGGCAGCGGAGGTTAAATATCCTGATTTACCTCCAGTTC
CAGATGAGAGCGTTCCGCCTTCCAGCAGCATACAAATCCCATGGTCTTCT
TCGCCCCCCTCCCACTTCCAACAACCGACCAAGAAGCCTCGAACTTTACC
ATGGCTGAAAGACGAGCCGGAACCAGAACCAGAACCACCGTCTCTGAAAC
CGCAAACGCCTATACGGCCGAAACGTACGGATCCCTGGAATCAATCATAT
AGCGCGATCAAGGATGGGCAAAGGGAACTGCGTCGGCAGAATAAAACTAT
GAAAGCACAAGCAAGCGGTCAAATACACAACCCTCGCACGAAGGTGGCTT
CAATCTTTCTCAGCGATGAGCAACGCCATGTCCTGGACGCGGTTGTACAG
CAAGGGAAGAGTATATTCTTTACAGGATCTGCCGGAACGGGCAAGTCGGT
GCTTATGAGGGAAATCATCAAGAAACTGCGTGATAAGTATAAGAAAGAGC
CGGACAGGGTTGCGGTAACAGCATCTACTGGCTTAGCAGCGTGTAATATC
GAGGGCGTGACTCTCCACAGTTTCGCAGGTATTGGACTGGGGAAGGAACC
TGTTCCGGAGCTTGTCAAGAAGGTCAGCATTGGCGTCGGCGGACCACACC
AATAGACATTTGCTAACTACCTATAGATCAAGAAGAATCAGAAAGCCCGC
AATCGTTGGATGCGCACCAAGGTTCTGATCGTCGATGAAGTGTCCATGGT
CGACGGCGATCTCTTCGACAAGCTAGAGGAAATCGCGCGTCGCATTAGGA
ATAATGGTCGTCCTTTCGGAGGTATACAACTAGTAGTCACCGGTGACTTT
TTCCAACTCCCTCCCGTCCCAGAGGGCAGCAACCGAGAAGCCAAATTCGC
ATTCGCAGCTGCGACCTGGAACACCTCCATACAACACACCATCCTCCTAA
CCCATATTTTCCGTCAACGAGACCCCGAATTCGCCGACATGCTCAACGAG
CTTCGCCTGGGAAAGATCTCACCACGGACCATCGACACATTCAAACAGCT
TTCTCGGCCTCTCGACTTCCATGACTCCCTCGAGGCCACCGAACTGTAAG
CCTGGCACACGCCCACACCACCAATCCCATCCCAAAATTAAGCACCCAGC
TCACTTCACCCCAGGTTCCCCACGCGCCAAGAAGTCGAGAGCGCCAACGG
CGCCCGAATGAGCCGCCTATCTGGCGAAACAATGACCTTCAACGCCGTCG
ACAGCGGCACAATCCAAGACCCCCAATTCCGCGAACGCCTACTAGCCAAC
TGCATGGCGCCACCAGTGATCCACCTCAAAAAGGGAGCGCAAGTCATGCT
CATCAAAAACATGGAAGACACGCTCGTCAACGGCTCCATCGGCCGTGTCG
TGGCATTCATGGACGAAGCCACCTTCGACTACTACATCGACAACGAGAAC
GAATTCTCAGGGGGGGCAGGAGAAGCAGGCAACAACAGCGACGACGAGAT
CATGGCTCGCGCACGCAAGAAACTCAAGCCCATGGCCGCCAACAAGGACG
GCAGTGGTCCCGGCGGCATAACGCTCACCCGTAAATGGCCCCTCGTATGC
TTCGTGCAGCCTGACGGAACCGAACGCCATCTCCTCTGCCAGCCGGAGAC
GTGGAAGATCGAGCTTCCAAACGGAGAGGTGCAGGCGCAGCGCCAACAGG
TGCCGCTTATTCTGGCTTGGGCTTTGTCCATCCATAAGGCGCAGGGGCAG
ACGCTGCAGCGGGTAAAGGTTGATTTGGGCCGCGTGTTTGAGAAGGGTCA
GGCCTATGTTGCGCTGAGTCGTGCGACCTCGAAAGCTGGTCTTCAGGTCA
TGCGGTTCGAGGCGCGCAAGGTCATGGTTCATCCGAAGGTTACCGATTTT
TATTCTAAGCTTGTTAGTATTAGTGATGTGATGAAGGCTTCGAAGAAGCC
GAAGTCGGGTGGTGGTGGTGGCCCGGATCCTGAGGATGATTTCGAGCAGG
ATTATTTAGAGCATTTATATGGGTGATATGGAAGTGTATATCATTCTTAG
ACCATTTGCTTATACTAGGGGCTCATTGTCAGGAGAAGAATGGATTATCA
ATCCTTCTTTCTGTGTATTTTGTGATATGACCTGGTGTGGCTGTCTACCG
GACTTGCTAATATTAAACTATAGGGATT
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Coding sequence (CDS) from alignment at ch1:3039438..3042165-

>KJC3_012996-T3 ID=KJC3_012996-T3|Name=KJC3_012996-T3|organism=Aspergillus niger KJC3|type=CDS|length=3090bp|location=Sequence derived from alignment at ch1:3039438..3042165- (Aspergillus niger KJC3)
ATCAAGAAGAATCAGAAAGCCCGCAATCGTTGGATGCGCACCAAGGTTCT
GATCGTCGATGAAGTGTCCATGGTCGACGGCGATCTCTTCGACAAGCTAG
AGGAAATCGCGCGTCGCATTAGGAATAATGGTCGTCCTTTCGGAGGTATA
CAACTAGTAGTCACCGGTGACTTTTTCCAACTCCCTCCCGTCCCAGAGGG
CAGCAACCGAGAAGCCAAATTCGCATTCGCAGCTGCGACCTGGAACACCT
CCATACAACACACCATCCTCCTAACCCATATTTTCCGTCAACGAGACCCC
GAATTCGCCGACATGCTCAACGAGCTTCGCCTGGGAAAGATCTCACCACG
GACCATCGACACATTCAAACAGCTTTCTCGGCCTCTCGACTTCCATGACT
CCCTCGAGGCCACCGAACTGTAAATGTACCTTTCCAGACACCGCACGTCG
GCCCCAGGTATACTCCGCCAATTCCTTTCCAATGGTCCAATCCTGAAATC
GCCAACGGCCTCTACTAGATACTCCGCATCGCGAACTTCGTCGGTTGGAG
AGGAAGCTGTGATGTTCAAGAAAGCCGTCAAGGAACATTCAGTAGCGTCA
GCGACTCCGCTACAGTCCACGCTTACGCGCAGCAATAATGGAAGTGCTTC
GATGAGACCCCCGCCGCCGTCCACAGGGGTTAAGCGCAAGATTGAGATGG
CTACCGTGCGAGAGTCTAATCTGGGGTCCCTCCACGACGGTGTCTACTTC
GATGAGAACGACTTCGACGACGATGACGACCTGGACTTTGAGGAACCCGA
TCCATTCATTCCCCCTGCCCCCATAACCAGACCGAGCGTCCCGAAATCCG
AACCGCCCAAGTACCCGTCCCTCCATGACATAGCTGCGCAAGAGGAAGAT
ATACCGATAGTCGACTTGACTTCGCCGAGCAAGGTGGCAGCGGAGGTTAA
ATATCCTGATTTACCTCCAGTTCCAGATGAGAGCGTTCCGCCTTCCAGCA
GCATACAAATCCCATGGTCTTCTTCGCCCCCCTCCCACTTCCAACAACCG
ACCAAGAAGCCTCGAACTTTACCATGGCTGAAAGACGAGCCGGAACCAGA
ACCAGAACCACCGTCTCTGAAACCGCAAACGCCTATACGGCCGAAACGTA
CGGATCCCTGGAATCAATCATATAGCGCGATCAAGGATGGGCAAAGGGAA
CTGCGTCGGCAGAATAAAACTATGAAAGCACAAGCAAGCGGTCAAATACA
CAACCCTCGCACGAAGGTGGCTTCAATCTTTCTCAGCGATGAGCAACGCC
ATGTCCTGGACGCGGTTGTACAGCAAGGGAAGAGTATATTCTTTACAGGA
TCTGCCGGAACGGGCAAGTCGGTGCTTATGAGGGAAATCATCAAGAAACT
GCGTGATAAGTATAAGAAAGAGCCGGACAGGGTTGCGGTAACAGCATCTA
CTGGCTTAGCAGCGTGTAATATCGAGGGCGTGACTCTCCACAGTTTCGCA
GGTATTGGACTGGGGAAGGAACCTGTTCCGGAGCTTGTCAAGAAGATCAA
GAAGAATCAGAAAGCCCGCAATCGTTGGATGCGCACCAAGGTTCTGATCG
TCGATGAAGTGTCCATGGTCGACGGCGATCTCTTCGACAAGCTAGAGGAA
ATCGCGCGTCGCATTAGGAATAATGGTCGTCCTTTCGGAGGTATACAACT
AGTAGTCACCGGTGACTTTTTCCAACTCCCTCCCGTCCCAGAGGGCAGCA
ACCGAGAAGCCAAATTCGCATTCGCAGCTGCGACCTGGAACACCTCCATA
CAACACACCATCCTCCTAACCCATATTTTCCGTCAACGAGACCCCGAATT
CGCCGACATGCTCAACGAGCTTCGCCTGGGAAAGATCTCACCACGGACCA
TCGACACATTCAAACAGCTTTCTCGGCCTCTCGACTTCCATGACTCCCTC
GAGGCCACCGAACTGTAAATGTACCTTTCCAGACACCGCACGTCGGCCCC
AGGTATACTCCGCCAATTCCTTTCCAATGGTCCAATCCTGAAATCGCCAA
CGGCCTCTACTAGATACTCCGCATCGCGAACTTCGTCGGTTGGAGAGGAA
GCTGTGATGTTCAAGAAAGCCGTCAAGGAACATTCAGTAGCGTCAGCGAC
TCCGCTACAGTCCACGCTTACGCGCAGCAATAATGGAAGTGCTTCGATGA
GACCCCCGCCGCCGTCCACAGGGGTTAAGCGCAAGATTGAGATGGCTACC
GTGCGAGAGTCTAATCTGGGGTCCCTCCACGACGGTGTCTACTTCGATGA
GAACGACTTCGACGACGATGACGACCTGGACTTTGAGGAACCCGATCCAT
TCATTCCCCCTGCCCCCATAACCAGACCGAGCGTCCCGAAATCCGAACCG
CCCAAGTACCCGTCCCTCCATGACATAGCTGCGCAAGAGGAAGATATACC
GATAGTCGACTTGACTTCGCCGAGCAAGGTGGCAGCGGAGGTTAAATATC
CTGATTTACCTCCAGTTCCAGATGAGAGCGTTCCGCCTTCCAGCAGCATA
CAAATCCCATGGTCTTCTTCGCCCCCCTCCCACTTCCAACAACCGACCAA
GAAGCCTCGAACTTTACCATGGCTGAAAGACGAGCCGGAACCAGAACCAG
AACCACCGTCTCTGAAACCGCAAACGCCTATACGGCCGAAACGTACGGAT
CCCTGGAATCAATCATATAGCGCGATCAAGGATGGGCAAAGGGAACTGCG
TCGGCAGAATAAAACTATGAAAGCACAAGCAAGCGGTCAAATACACAACC
CTCGCACGAAGGTGGCTTCAATCTTTCTCAGCGATGAGCAACGCCATGTC
CTGGACGCGGTTGTACAGCAAGGGAAGAGTATATTCTTTACAGGATCTGC
CGGAACGGGCAAGTCGGTGCTTATGAGGGAAATCATCAAGAAACTGCGTG
ATAAGTATAAGAAAGAGCCGGACAGGGTTGCGGTAACAGCATCTACTGGC
TTAGCAGCGTGTAATATCGAGGGCGTGACTCTCCACAGTTTCGCAGGTAT
TGGACTGGGGAAGGAACCTGTTCCGGAGCTTGTCAAGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0000723telomere maintenance
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PIF1_1KJC3_012996Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012996-T3KJC3_012996-T3-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012996-T3.cdsKJC3_012996-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012996-T3.utr3p1KJC3_012996-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012996-T3.exon2KJC3_012996-T3.exon2Aspergillus niger KJC3exon
KJC3_012996-T3.exon1KJC3_012996-T3.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012996-T3.utr5p1KJC3_012996-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_1.14
NoteantiSMASH:Cluster_1.13
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR010285
DBxrefInterPro:IPR003593
DBxrefPFAM:PF05970
DBxrefPFAM:PF13604
DBxrefPFAM:PF13401
DBxrefPFAM:PF13245
Product variant 3
ProductDNA helicase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:3039438..3042165 -
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