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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:3805204..3808223+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012998-T1 ID=KJC3_012998-T1|Name=KJC3_012998-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3020bp|location=Sequence derived from alignment at ch1:3805204..3808223+ (Aspergillus niger KJC3)
CAGCCACCAATTATGATTGGCTGGAACGGCAAAAAATAAGACCGGGACCG
ACCGAGGCCAAGCGACCTCTCCGCATGCCCGCCTAGTTGAGCGTCAACCG
AATGAACACTTTTTGATAACCCCCATCAAGCAAATGGAAAACAGCAGCCC
ACCCGACTACCAAGCGCTCTATTTGAGGGCAGAGGAGGAACGCCAGCGGG
AAGCAGAGCTTAGGAAACAAGCCGAGGAACGCGAACGACAAGCTGAGGAA
CGCCAACGGCAAGCTGAGCAGGAAAGGGACCAGGAAAGAGAGCAAACACG
ACGAACCACCCTTGCAGAGCTACTTCGATACTGCCACAACTATACTTCTC
TATGCCTGAGAGTCGAAAGTCCGTCCCGTTCTACCACGGGAACGGTTCCG
GCGCCTAAGGGGAAGCGCTGTCCGCTGCAACTTCTGCCTTGGACCGAGTG
CACAGCCATACAGCAAGGGATCTATCACTCTGTTTGTACTTATTTAGCAC
CGCCTGAACAACCTGCTGCACAAGTGTTTCCGTCGCGTACTGTCCTAAAG
GGGTTTGGGGAAGAGTTCAAGAAGAGAGCTATAAGCAGTGAGCAGGATCT
TCAAAGCTATGAGAGATTCGGGGTGGAGAACCATGTCCGTGATATTATCG
CGGAACTCTGCAGGATACGTGCTGCTCGAGAGGAATTTCAGTTAGGCAAT
GGAATTCAGTTCGATAACCACGCAAATGCCCTCGATGCAGTTGACGCCGA
CCAGTCTAAAATGGATAAATCAGCGAATTCCCGTCCGGATCAATATTGCA
TCCACCGGGTCGACGGTGATAAAAATACAACTATTATGACAGTTGAGTAC
AAGCCGCCCCATAAACTATCCGTGGAGAATCTTCGAGCGGGTTTGCGACC
GATGCAATTCCGGGATGAAGTGGTCAGACCGGACTCCGTTCCCACGGAGG
GGCCCGAGAAACTGAGATATAATGCGGCCTGGCTAACCGGCTCGGCTGTG
GTTCAGGAGTATCATGTCATGCTCCAGGAAGGGCTCGAGTACTCATATCT
GACTAATGGATTCGCATTGGTTTTGCTGCGGGTCCCCTATGATAATCCGG
GCACCTTATACTATCATCTCTGTGAACCCAACATGGAAGTTAATCCGGAT
GATGAACTGAATTCTCTACAACAGCCGCTAACAGCTATTGCTCGGGTATT
GTGTTTATGCCTCATGAGTTTCCGCTCACAGTATCGTGACCAGGAGTGGC
GGAATGCCACAAAGAAGCTGCCAAAATGGAAGACAAGTTTCGATCATACA
CGTTCCCAGATCCCGGAACCGGAATTGCAACAAAACCCGCCCGATTCAGA
ATATACAGCATCGGAGTATACGAGCTCCGAACCTACTACATCAGAATATA
TACCGTCTTCGTCTCCTGCTCCACCCCCTGCCGACACCCGTCGAATACCC
ACCCGGTCTCGAACTAGCTGCGCGTCGCCGAATCTGACACCACGTCATGA
TTCTGACTCTGACGCAGATCAAGCTCCAGGAGGAAGGAAGCGTGGCTTCA
GTCAGGTTGCATCCTCTCCTTCATCTCCATCTGCTCAACGATCAGCACAT
CTGGCGGGAGATCAATATAACCCGATCGGCAGCCAAGGTCAGCAGCACAC
CGCACAGTTTTGCACCCAGAAATGTCTACGTAGCCTGCAACGAGGTGGTC
AGCTGGATGTTACTTGCCCAAATTTCATGCTCCACCGACAGGGGGCGGAC
AGCAGCCAACACCCCATCAATGCTAAAACGCTGATCAAGCAACTCAAACA
GCAACTAGATGAAAATATCGACCGAGACTGTACACCAATGGGGGGTTGTG
GCGCATCGGGGGTCCCATTTAAAGTCACTTGTACGGCATATGGATATACT
ATGGTCGGTAAAGGAACAACTCCCCGACGGTGGGAGGAGGTCAAACGTGA
GGAAGTCGTATACCGTGTACTCGACCAAGCACAGGCTTCTGCTGTTCCTG
TTTTTCTGGGGGCAATCGATTTGGCCAAATCCTACTTCGTACATGGAGCT
GGCGAGATCTGCCACATGCTCATCATGGCCTGGGGGGGTGAGCCCATACA
TAAGATAGAGCGTGACACTACGATCACACGTGAGATTGCGAGGTCTGAGA
AGGAGATCTGTTCCTTGGGAGTCTCACACCAGGACCTCCGGTCGGACAAT
ATTCTGTGGAACGCCGAGCTGGGACGGGCCCTGATCATTGACTTTCATTG
CTCGAAACTGAATCACCGACCTATGAAAAGGCGGGTGAAGCCACCCGGGA
GGCATCCGTGTAGAGAACTGCACAAGCGTAAACGACTTTGTATTGTCTAA
TAATGAAGGTGAGAGGAATTGCACGCCTACGCGTGAATGAATAATATAGA
CTGGCAGTAATGTGATTAATGGAAAAATTCTCAAGTAAATGCAGGATCAT
TGTTTATACAGTAGCTGCCTTCATAACTTGAAGTCCTTATGAACAGTCTG
CCAGATTGTCATCGGCAAAAGAAATGCAGAGGGCCTCTAAATCTCAGTAC
GTTAAAAGACACAGTTTTGGGCCGAAGGCCACAATATTGGCGACGGCGGA
GCCACAGATAAGTACGTAGTATATTCATACGCTCACCCATCCGCCTTGTG
TTGGTTTCCCCACTATACTAAAATACGAATTCGCACCTAGCCTAGTGGTT
TATGGTTTAGAATCCAACTCCTTGGGCGAATGCAGGTGTTCACTGTATAG
CGATCTCTCTCGATACACGTCTTTGCTGTAAGCTATTTCTTTCCTGACAA
ATCTGGAGCCTTACCAAGGCCTGTGACTGTTTCTCTTCCTCGCCACCCTG
CCATAAGGGGAAGGGTTAGGTACTATTGTGGCAACGAATTTCATTGTTGT
GGTAAATGTCGTGCCGGCGATGGGAATCGAACCCACCACCTCCAAATAGC
AAGGTGACCAATCCCGCATCTTTTGGAAATTACCTCGGAGCGCTTACCAC
TACGCCACCGCCACAGGCGG back to topCoding sequence (CDS) from alignment at ch1:3805204..3808223+ >KJC3_012998-T1 ID=KJC3_012998-T1|Name=KJC3_012998-T1|organism=Aspergillus niger KJC3|type=CDS|length=2217bp|location=Sequence derived from alignment at ch1:3805204..3808223+ (Aspergillus niger KJC3)
ATGGAAAACAGCAGCCCACCCGACTACCAAGCGCTCTATTTGAGGGCAGA
GGAGGAACGCCAGCGGGAAGCAGAGCTTAGGAAACAAGCCGAGGAACGCG
AACGACAAGCTGAGGAACGCCAACGGCAAGCTGAGCAGGAAAGGGACCAG
GAAAGAGAGCAAACACGACGAACCACCCTTGCAGAGCTACTTCGATACTG
CCACAACTATACTTCTCTATGCCTGAGAGTCGAAAGTCCGTCCCGTTCTA
CCACGGGAACGGTTCCGGCGCCTAAGGGGAAGCGCTGTCCGCTGCAACTT
CTGCCTTGGACCGAGTGCACAGCCATACAGCAAGGGATCTATCACTCTGT
TTGTACTTATTTAGCACCGCCTGAACAACCTGCTGCACAAGTGTTTCCGT
CGCGTACTGTCCTAAAGGGGTTTGGGGAAGAGTTCAAGAAGAGAGCTATA
AGCAGTGAGCAGGATCTTCAAAGCTATGAGAGATTCGGGGTGGAGAACCA
TGTCCGTGATATTATCGCGGAACTCTGCAGGATACGTGCTGCTCGAGAGG
AATTTCAGTTAGGCAATGGAATTCAGTTCGATAACCACGCAAATGCCCTC
GATGCAGTTGACGCCGACCAGTCTAAAATGGATAAATCAGCGAATTCCCG
TCCGGATCAATATTGCATCCACCGGGTCGACGGTGATAAAAATACAACTA
TTATGACAGTTGAGTACAAGCCGCCCCATAAACTATCCGTGGAGAATCTT
CGAGCGGGTTTGCGACCGATGCAATTCCGGGATGAAGTGGTCAGACCGGA
CTCCGTTCCCACGGAGGGGCCCGAGAAACTGAGATATAATGCGGCCTGGC
TAACCGGCTCGGCTGTGGTTCAGGAGTATCATGTCATGCTCCAGGAAGGG
CTCGAGTACTCATATCTGACTAATGGATTCGCATTGGTTTTGCTGCGGGT
CCCCTATGATAATCCGGGCACCTTATACTATCATCTCTGTGAACCCAACA
TGGAAGTTAATCCGGATGATGAACTGAATTCTCTACAACAGCCGCTAACA
GCTATTGCTCGGGTATTGTGTTTATGCCTCATGAGTTTCCGCTCACAGTA
TCGTGACCAGGAGTGGCGGAATGCCACAAAGAAGCTGCCAAAATGGAAGA
CAAGTTTCGATCATACACGTTCCCAGATCCCGGAACCGGAATTGCAACAA
AACCCGCCCGATTCAGAATATACAGCATCGGAGTATACGAGCTCCGAACC
TACTACATCAGAATATATACCGTCTTCGTCTCCTGCTCCACCCCCTGCCG
ACACCCGTCGAATACCCACCCGGTCTCGAACTAGCTGCGCGTCGCCGAAT
CTGACACCACGTCATGATTCTGACTCTGACGCAGATCAAGCTCCAGGAGG
AAGGAAGCGTGGCTTCAGTCAGGTTGCATCCTCTCCTTCATCTCCATCTG
CTCAACGATCAGCACATCTGGCGGGAGATCAATATAACCCGATCGGCAGC
CAAGGTCAGCAGCACACCGCACAGTTTTGCACCCAGAAATGTCTACGTAG
CCTGCAACGAGGTGGTCAGCTGGATGTTACTTGCCCAAATTTCATGCTCC
ACCGACAGGGGGCGGACAGCAGCCAACACCCCATCAATGCTAAAACGCTG
ATCAAGCAACTCAAACAGCAACTAGATGAAAATATCGACCGAGACTGTAC
ACCAATGGGGGGTTGTGGCGCATCGGGGGTCCCATTTAAAGTCACTTGTA
CGGCATATGGATATACTATGGTCGGTAAAGGAACAACTCCCCGACGGTGG
GAGGAGGTCAAACGTGAGGAAGTCGTATACCGTGTACTCGACCAAGCACA
GGCTTCTGCTGTTCCTGTTTTTCTGGGGGCAATCGATTTGGCCAAATCCT
ACTTCGTACATGGAGCTGGCGAGATCTGCCACATGCTCATCATGGCCTGG
GGGGGTGAGCCCATACATAAGATAGAGCGTGACACTACGATCACACGTGA
GATTGCGAGGTCTGAGAAGGAGATCTGTTCCTTGGGAGTCTCACACCAGG
ACCTCCGGTCGGACAATATTCTGTGGAACGCCGAGCTGGGACGGGCCCTG
ATCATTGACTTTCATTGCTCGAAACTGAATCACCGACCTATGAAAAGGCG
GGTGAAGCCACCCGGGAGGCATCCGTGTAGAGAACTGCACAAGCGTAAAC
GACTTTGTATTGTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012998-T1.utr5p1 | KJC3_012998-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012998-T1.utr3p1 | KJC3_012998-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:3805204..3808223 + |
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