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KJC3_013006-T3, KJC3_013006-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013006-T3
Unique NameKJC3_013006-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:330819..334006+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013006-T3 ID=KJC3_013006-T3|Name=KJC3_013006-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3188bp|location=Sequence derived from alignment at ch3:330819..334006+ (Aspergillus niger KJC3)
GCGTTCACATTGACGTTACTTAGTTTGCCTCAGACGTTGGTTCTGCCAAC CCCTCTAGCCATTTGTCGCCCAGAAATGCTCGTTAGATCTCCAATAATCT CTCACCCCTAACTAACCATGAACTGGAAGCATGAATTGGCGTTTTCTTAC TGTCCTGTAGCGGGATGCGTACGGGTTTTCCGGGTTGGGTCGGGTTTGGG GGTACCCGCGGGTTGACTGACGCGCAATAAATTGATAGGTCACAAAACAA CAACGCGACCAAAAAAAGTAAAAAGAAGAGACATCTTCGCTATTTATCAT GAATCCTCATTCAAAGCACGATAAGGAGGCATGGCCATGGCCTCTACCAC TTCGTGCTCATCGAGATCGATGTCTCATACATTCAGCCCAGCGCTTTCGA TTGAGCCATCATCCGATTCATTCCCAGACTCAGACTTCCAAATATCGGTA AAGCTTCTTCAGCCAACGCTCTTGGTCTTCTGCTGAAAACGTAGTAGCCT TTTCCACATTCCAGCGAGAGTCTGGATGTCCTTGCCGACAAGCCTCCACC AACCCTGAGACGCGTCGGATCTGACCGCAGAAAAAATTGGCTTCTTTTCG AGCCAGCCCAAGAGGATGACTTCCTAAGTTGGTGGCTCGACACTGAATAT GGTCGACAAATGAACAGACACGGACGTGCCCGGATCAGATGGTCGGTTGA GTCCCATTCCGCTGAAGTCTGGAAGCAGTTCGACCAAGTGGCGGAGATAC ATTCAGGACGACCAAAAGTTATCTGCCGTAACTGCATGACGTTGCTAGAT CACCCGCAACACAAATCACACGGGACAAGCGCAATGGGCAAACATCAGAG ATCTAGCTCCTGCCGCAAGGGAAAGAAAAAGGTCTCACAGCAATCTCTTA TCTCGGATTCCATCCAGAGGACCCCAGTTTCTAGTTCTAGCCCAAACAAG TTCACGAAAGCGCAACTCGAGGAACAGCTCCTGAAAACTATAACGTGCTT GCGGCTTCCCTTCCAAATTGTGGAAGATAATGAATTCCAGAGACTGCTCA ACTTGGTCCGCTCTGGGCCCCAAGGAGTGGAACTTCCCTCTGCAAAGACA CTCCGTCGGAGACTGCGTGAAGCTGTTGTTACCCAACAAGAAATGCAACT GAGAGATCTTCCTGAAGATGCGAAAGTTTCTCTCGCCTTGGACTGTTGGA CCAGCCCATTCCAGCAAGCATTCATGGCTATCACAGTCTATTTCATTGAT AAAGAGTGGAATTATAGAGAGTTGCTCCTTGGTTTCGAGCCTCTGCACGG TCCTCATTCAGGGGTTAATCTGAGCGACGTCCTGCTTCAGTTACTGCGGG AACGGCATCTTTTGAGTCGAATCTTCAGCGTAACCACTGACAATGCGACA AACAACGAGACTTTGGTCCGAGCGCTGCAAGAGACGCTTCTTTCCACTGG CGCGATCCGTTCTCGGGACTCTATTATCCGGGTTCCATGCATGGCGCATG TCATCCAGCTTTGTCTAAAGCGGCTTCTGGGGCATATCAAAGCAGCGCCT CAGAATAAAGAAGTGGCAAATGTATGGTCAGACTCACAGATGAGTTATCT CAGAAGTTCGGCTGATCATGAGGGCGTGGCTAGCACACTCGGAAAGGTCT GTTTTCTGTTATCTGGTTGATAGAAAGGACGGAGCTAATGGGGTCTTCCA ATAGATCAGGTCGTTTGCTACCTTTGTTAATGCAAGTCCCCAACGGCGGG ATGCGTTCCTGTGTCTTCAGTCAGGTCGGACTCGACTATTTCCAATCCAC GATGTGCAAACACGCTGGAACTCGACGTTCTTGATGCTCCGGCGGGCGCG CAAGTTGCGAAACTATATTGATAAATACTGCAATGACCATGACTACTCGC AATTCAGCATCACTGATGATGGATGGCGACAGATTGATTACCTCCTGCAA TTGACCAAGCCATTCTTTCAGTTCACCATGGCCCTCATGAAGACAAAAGA TGTCACGATCCACAGTGTGTTTCTCGTCTACAGAAAGCTGCTGGAACACA TCGAACGGTCAAATCAACGCTTAAGCAACAAGACAACGCCATGGAAGCGG GCCATGTATGATGCATTGCTTGCTGCGAAGCAAAAGTTAAAAGAATATTA TGAAAAGACCTATCGCGATCATGGGTTTCTTTATGGTACAGGAACCTTGC TCGCACCGCAGTACAAACTCTGCGCCTTTGATGACACGGAATATTCTAAA TGCCAGAGCGAAACATCCAAACGCTACTGTGATTACTTGAGGAATTGCTT TGCACAGTACAAACGCGAGACGCCCGAGATGTCGTTTCGGCCGATGCATT CCTCTTGTCCACAGCAGGCGTCAGAGTTGGACCGGCTCCTCACCCCACTG AGTACTTCCCAGCTGAGTGCAAGAAGCGAATACGACGAAGTAGACCGATA TTTGAGAGAGGGTGAGCGAAGACCCTGAGATAATTGTTGCCTCATGGCAA GCTGACTTCCGCAGGAACCGTCCAGCTGCCGCCGCGAGCCTATTGGAAAG AGCACGAACATGAATACCCCGTTCTGTCGCGACTTGCTCGCGACTTGCTT TCCGTTCCGGCCACTGGCGCTGGTGTCGAGCGTCTATTCAACACTGCGCG AGATATCTGCCACTATCGTCGTGGGTCGCTCAATGAATCGACCATTCAAG ACCTAATAATGTACAAGTGCTCAGAGATATTTAACCTGGACATTGAGACG TTGAGCTGCCTTGAAAAATCATCGATTGAGGACGTCGATCAAGAGAGGCT CGAGGAGGAGGAAGCCATCAAAACAAGTAAAGAAGAATTTGATCCAATCA GTGATGACGAAGAGGGAGCAATTGAAGACGACGGCCGCGTACTTTCCGCT GGAGATGTAACAAGCCGAGAATGTATGATGTCAGATGTTTCTCCCACGCA TGACATCCACGAACAAGATGACGAGGAAGATGACGGGGAGAAGGAGCAGA ACGAGGAGGAGGCTACTGACGATGAATTGCTTCCACCCCCAATTCAGCAG CTCCGCGACAGATCTCAAAAAAGGTCCTCAGGGAGGGTCACAGTGCCATC TAGTAGACTACAAGGTTACGAATTGTATTAGGGCGGGTCACGAATGTATA GAGTATTAATATCACAATCACTTCATGAATTTCTTCGC
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Coding sequence (CDS) from alignment at ch3:330819..334006+

>KJC3_013006-T3 ID=KJC3_013006-T3|Name=KJC3_013006-T3|organism=Aspergillus niger KJC3|type=CDS|length=5316bp|location=Sequence derived from alignment at ch3:330819..334006+ (Aspergillus niger KJC3)
ATGGCCATGGCCTCTACCACTTCGTGCTCATCGAGATCGATGTCTCATAC
ATTCAGCCCAGCGCTTTCGATTGAGCCATCATCCGATTCATTCCCAGACT
CAGACTTCCAAATATCGCCTTTTCCACATTCCAGCGAGAGTCTGGATGTC
CTTGCCGACAAGCCTCCACCAACCCTGAGACGCGTCGGATCTGACCGCAG
AAAAAATTGGCTTCTTTTCGAGCCAGCCCAAGAGGATGACTTCCTAAGTT
GGTGGCTCGACACTGAATATGGTCGACAAATGAACAGACACGGACGTGCC
CGGATCAGATGGTCGGTTGAGTCCCATTCCGCTGAAGTCTGGAAGCAGTT
CGACCAAGTGGCGGAGATACATTCAGGACGACCAAAAGTTATCTGCCGTA
ACTGCATGACGTTGCTAGATCACCCGCAACACAAATCACACGGGACAAGC
GCAATGGGCAAACATCAGAGATCTAGCTCCTGCCGCAAGGGAAAGAAAAA
GGTCTCACAGCAATCTCTTATCTCGGATTCCATCCAGAGGACCCCAGTTT
CTAGTTCTAGCCCAAACAAGTTCACGAAAGCGCAACTCGAGGAACAGCTC
CTGAAAACTATAACGTGCTTGCGGCTTCCCTTCCAAATTGTGGAAGATAA
TGAATTCCAGAGACTGCTCAACTTGGTCCGCTCTGGGCCCCAAGGAGTGG
AACTTCCCTCTGCAAAGACACTCCGTCGGAGACTGCGTGAAGCTGTTGTT
ACCCAACAAGAAATGCAACTGAGAGATCTTCCTGAAGATGCGAAAGTTTC
TCTCGCCTTGGACTGTTGGACCAGCCCATTCCAGCAAGCATTCATGGCTA
TCACAGTCTATTTCATTGATAAAGAGTGGAATTATAGAGAGTTGCTCCTT
GGTTTCGAGCCTCTGCACGGTCCTCATTCAGGGGTTAATCTGAGCGACGT
CCTGCTTCAGTTACTGCGGGAACGGCATCTTTTGAGTCGAATCTTCAGCG
TAACCACTGACAATGCGACAAACAACGAGACTTTGGTCCGAGCGCTGCAA
GAGACGCTTCTTTCCACTGGCGCGATCCGTTCTCGGGACTCTATTATCCG
GGTTCCATGCATGGCGCATGTCATCCAGCTTTGTCTAAAGCGGCTTCTGG
GGCATATCAAAGCAGCGCCTCAGAATAAAGAAGTGGCAAATCACACTCGG
AAAGGTCGTTTGCTACCTTTGTTAATGCAAGTCCCCAACGGCGGGATGCG
TTCCTGTGTCTTCAGTCAGGTCGGACTCGACTATTTCCAATCCACGATGT
GCAAACACGCTGGAACTCGACGTTCTTGAATGGCCATGGCCTCTACCACT
TCGTGCTCATCGAGATCGATGTCTCATACATTCAGCCCAGCGCTTTCGAT
TGAGCCATCATCCGATTCATTCCCAGACTCAGACTTCCAAATATCGCCTT
TTCCACATTCCAGCGAGAGTCTGGATGTCCTTGCCGACAAGCCTCCACCA
ACCCTGAGACGCGTCGGATCTGACCGCAGAAAAAATTGGCTTCTTTTCGA
GCCAGCCCAAGAGGATGACTTCCTAAGTTGGTGGCTCGACACTGAATATG
GTCGACAAATGAACAGACACGGACGTGCCCGGATCAGATGGTCGGTTGAG
TCCCATTCCGCTGAAGTCTGGAAGCAGTTCGACCAAGTGGCGGAGATACA
TTCAGGACGACCAAAAGTTATCTGCCGTAACTGCATGACGTTGCTAGATC
ACCCGCAACACAAATCACACGGGACAAGCGCAATGGGCAAACATCAGAGA
TCTAGCTCCTGCCGCAAGGGAAAGAAAAAGGTCTCACAGCAATCTCTTAT
CTCGGATTCCATCCAGAGGACCCCAGTTTCTAGTTCTAGCCCAAACAAGT
TCACGAAAGCGCAACTCGAGGAACAGCTCCTGAAAACTATAACGTGCTTG
CGGCTTCCCTTCCAAATTGTGGAAGATAATGAATTCCAGAGACTGCTCAA
CTTGGTCCGCTCTGGGCCCCAAGGAGTGGAACTTCCCTCTGCAAAGACAC
TCCGTCGGAGACTGCGTGAAGCTGTTGTTACCCAACAAGAAATGCAACTG
AGAGATCTTCCTGAAGATGCGAAAGTTTCTCTCGCCTTGGACTGTTGGAC
CAGCCCATTCCAGCAAGCATTCATGGCTATCACAGTCTATTTCATTGATA
AAGAGTGGAATTATAGAGAGTTGCTCCTTGGTTTCGAGCCTCTGCACGGT
CCTCATTCAGGGGTTAATCTGAGCGACGTCCTGCTTCAGTTACTGCGGGA
ACGGCATCTTTTGAGTCGAATCTTCAGCGTAACCACTGACAATGCGACAA
ACAACGAGACTTTGGTCCGAGCGCTGCAAGAGACGCTTCTTTCCACTGGC
GCGATCCGTTCTCGGGACTCTATTATCCGGGTTCCATGCATGGCGCATGT
CATCCAGCTTTGTCTAAAGCGGCTTCTGGGGCATATCAAAGCAGCGCCTC
AGAATAAAGAAGTGGCAAATCACACTCGGAAAGGTCGTTTGCTACCTTTG
TTAATGCAAGTCCCCAACGGCGGGATGCGTTCCTGTGTCTTCAGTCAGGT
CGGACTCGACTATTTCCAATCCACGATGTGCAAACACGCTGGAACTCGAC
GTTCTTGAATGGCCATGGCCTCTACCACTTCGTGCTCATCGAGATCGATG
TCTCATACATTCAGCCCAGCGCTTTCGATTGAGCCATCATCCGATTCATT
CCCAGACTCAGACTTCCAAATATCGCCTTTTCCACATTCCAGCGAGAGTC
TGGATGTCCTTGCCGACAAGCCTCCACCAACCCTGAGACGCGTCGGATCT
GACCGCAGAAAAAATTGGCTTCTTTTCGAGCCAGCCCAAGAGGATGACTT
CCTAAGTTGGTGGCTCGACACTGAATATGGTCGACAAATGAACAGACACG
GACGTGCCCGGATCAGATGGTCGGTTGAGTCCCATTCCGCTGAAGTCTGG
AAGCAGTTCGACCAAGTGGCGGAGATACATTCAGGACGACCAAAAGTTAT
CTGCCGTAACTGCATGACGTTGCTAGATCACCCGCAACACAAATCACACG
GGACAAGCGCAATGGGCAAACATCAGAGATCTAGCTCCTGCCGCAAGGGA
AAGAAAAAGGTCTCACAGCAATCTCTTATCTCGGATTCCATCCAGAGGAC
CCCAGTTTCTAGTTCTAGCCCAAACAAGTTCACGAAAGCGCAACTCGAGG
AACAGCTCCTGAAAACTATAACGTGCTTGCGGCTTCCCTTCCAAATTGTG
GAAGATAATGAATTCCAGAGACTGCTCAACTTGGTCCGCTCTGGGCCCCA
AGGAGTGGAACTTCCCTCTGCAAAGACACTCCGTCGGAGACTGCGTGAAG
CTGTTGTTACCCAACAAGAAATGCAACTGAGAGATCTTCCTGAAGATGCG
AAAGTTTCTCTCGCCTTGGACTGTTGGACCAGCCCATTCCAGCAAGCATT
CATGGCTATCACAGTCTATTTCATTGATAAAGAGTGGAATTATAGAGAGT
TGCTCCTTGGTTTCGAGCCTCTGCACGGTCCTCATTCAGGGGTTAATCTG
AGCGACGTCCTGCTTCAGTTACTGCGGGAACGGCATCTTTTGAGTCGAAT
CTTCAGCGTAACCACTGACAATGCGACAAACAACGAGACTTTGGTCCGAG
CGCTGCAAGAGACGCTTCTTTCCACTGGCGCGATCCGTTCTCGGGACTCT
ATTATCCGGGTTCCATGCATGGCGCATGTCATCCAGCTTTGTCTAAAGCG
GCTTCTGGGGCATATCAAAGCAGCGCCTCAGAATAAAGAAGTGGCAAATC
ACACTCGGAAAGGTCGTTTGCTACCTTTGTTAATGCAAGTCCCCAACGGC
GGGATGCGTTCCTGTGTCTTCAGTCAGGTCGGACTCGACTATTTCCAATC
CACGATGTGCAAACACGCTGGAACTCGACGTTCTTGAATGGCCATGGCCT
CTACCACTTCGTGCTCATCGAGATCGATGTCTCATACATTCAGCCCAGCG
CTTTCGATTGAGCCATCATCCGATTCATTCCCAGACTCAGACTTCCAAAT
ATCGCCTTTTCCACATTCCAGCGAGAGTCTGGATGTCCTTGCCGACAAGC
CTCCACCAACCCTGAGACGCGTCGGATCTGACCGCAGAAAAAATTGGCTT
CTTTTCGAGCCAGCCCAAGAGGATGACTTCCTAAGTTGGTGGCTCGACAC
TGAATATGGTCGACAAATGAACAGACACGGACGTGCCCGGATCAGATGGT
CGGTTGAGTCCCATTCCGCTGAAGTCTGGAAGCAGTTCGACCAAGTGGCG
GAGATACATTCAGGACGACCAAAAGTTATCTGCCGTAACTGCATGACGTT
GCTAGATCACCCGCAACACAAATCACACGGGACAAGCGCAATGGGCAAAC
ATCAGAGATCTAGCTCCTGCCGCAAGGGAAAGAAAAAGGTCTCACAGCAA
TCTCTTATCTCGGATTCCATCCAGAGGACCCCAGTTTCTAGTTCTAGCCC
AAACAAGTTCACGAAAGCGCAACTCGAGGAACAGCTCCTGAAAACTATAA
CGTGCTTGCGGCTTCCCTTCCAAATTGTGGAAGATAATGAATTCCAGAGA
CTGCTCAACTTGGTCCGCTCTGGGCCCCAAGGAGTGGAACTTCCCTCTGC
AAAGACACTCCGTCGGAGACTGCGTGAAGCTGTTGTTACCCAACAAGAAA
TGCAACTGAGAGATCTTCCTGAAGATGCGAAAGTTTCTCTCGCCTTGGAC
TGTTGGACCAGCCCATTCCAGCAAGCATTCATGGCTATCACAGTCTATTT
CATTGATAAAGAGTGGAATTATAGAGAGTTGCTCCTTGGTTTCGAGCCTC
TGCACGGTCCTCATTCAGGGGTTAATCTGAGCGACGTCCTGCTTCAGTTA
CTGCGGGAACGGCATCTTTTGAGTCGAATCTTCAGCGTAACCACTGACAA
TGCGACAAACAACGAGACTTTGGTCCGAGCGCTGCAAGAGACGCTTCTTT
CCACTGGCGCGATCCGTTCTCGGGACTCTATTATCCGGGTTCCATGCATG
GCGCATGTCATCCAGCTTTGTCTAAAGCGGCTTCTGGGGCATATCAAAGC
AGCGCCTCAGAATAAAGAAGTGGCAAATCACACTCGGAAAGGTCGTTTGC
TACCTTTGTTAATGCAAGTCCCCAACGGCGGGATGCGTTCCTGTGTCTTC
AGTCAGGTCGGACTCGACTATTTCCAATCCACGATGTGCAAACACGCTGG
AACTCGACGTTCTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013006KJC3_013006Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013006-T3KJC3_013006-T3-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013006-T3.utr5p1KJC3_013006-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013006-T3.exon1KJC3_013006-T3.exon1Aspergillus niger KJC3exon
KJC3_013006-T3.exon2KJC3_013006-T3.exon2Aspergillus niger KJC3exon
KJC3_013006-T3.exon3KJC3_013006-T3.exon3Aspergillus niger KJC3exon
KJC3_013006-T3.exon4KJC3_013006-T3.exon4Aspergillus niger KJC3exon
KJC3_013006-T3.exon5KJC3_013006-T3.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013006-T3.cdsKJC3_013006-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013006-T3.utr3p1KJC3_013006-T3.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_013006-T3.utr3p2KJC3_013006-T3.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR037220
DBxrefInterPro:IPR012337
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:330819..334006 +