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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:330819..334006+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013006-T3 ID=KJC3_013006-T3|Name=KJC3_013006-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3188bp|location=Sequence derived from alignment at ch3:330819..334006+ (Aspergillus niger KJC3)
GCGTTCACATTGACGTTACTTAGTTTGCCTCAGACGTTGGTTCTGCCAAC
CCCTCTAGCCATTTGTCGCCCAGAAATGCTCGTTAGATCTCCAATAATCT
CTCACCCCTAACTAACCATGAACTGGAAGCATGAATTGGCGTTTTCTTAC
TGTCCTGTAGCGGGATGCGTACGGGTTTTCCGGGTTGGGTCGGGTTTGGG
GGTACCCGCGGGTTGACTGACGCGCAATAAATTGATAGGTCACAAAACAA
CAACGCGACCAAAAAAAGTAAAAAGAAGAGACATCTTCGCTATTTATCAT
GAATCCTCATTCAAAGCACGATAAGGAGGCATGGCCATGGCCTCTACCAC
TTCGTGCTCATCGAGATCGATGTCTCATACATTCAGCCCAGCGCTTTCGA
TTGAGCCATCATCCGATTCATTCCCAGACTCAGACTTCCAAATATCGGTA
AAGCTTCTTCAGCCAACGCTCTTGGTCTTCTGCTGAAAACGTAGTAGCCT
TTTCCACATTCCAGCGAGAGTCTGGATGTCCTTGCCGACAAGCCTCCACC
AACCCTGAGACGCGTCGGATCTGACCGCAGAAAAAATTGGCTTCTTTTCG
AGCCAGCCCAAGAGGATGACTTCCTAAGTTGGTGGCTCGACACTGAATAT
GGTCGACAAATGAACAGACACGGACGTGCCCGGATCAGATGGTCGGTTGA
GTCCCATTCCGCTGAAGTCTGGAAGCAGTTCGACCAAGTGGCGGAGATAC
ATTCAGGACGACCAAAAGTTATCTGCCGTAACTGCATGACGTTGCTAGAT
CACCCGCAACACAAATCACACGGGACAAGCGCAATGGGCAAACATCAGAG
ATCTAGCTCCTGCCGCAAGGGAAAGAAAAAGGTCTCACAGCAATCTCTTA
TCTCGGATTCCATCCAGAGGACCCCAGTTTCTAGTTCTAGCCCAAACAAG
TTCACGAAAGCGCAACTCGAGGAACAGCTCCTGAAAACTATAACGTGCTT
GCGGCTTCCCTTCCAAATTGTGGAAGATAATGAATTCCAGAGACTGCTCA
ACTTGGTCCGCTCTGGGCCCCAAGGAGTGGAACTTCCCTCTGCAAAGACA
CTCCGTCGGAGACTGCGTGAAGCTGTTGTTACCCAACAAGAAATGCAACT
GAGAGATCTTCCTGAAGATGCGAAAGTTTCTCTCGCCTTGGACTGTTGGA
CCAGCCCATTCCAGCAAGCATTCATGGCTATCACAGTCTATTTCATTGAT
AAAGAGTGGAATTATAGAGAGTTGCTCCTTGGTTTCGAGCCTCTGCACGG
TCCTCATTCAGGGGTTAATCTGAGCGACGTCCTGCTTCAGTTACTGCGGG
AACGGCATCTTTTGAGTCGAATCTTCAGCGTAACCACTGACAATGCGACA
AACAACGAGACTTTGGTCCGAGCGCTGCAAGAGACGCTTCTTTCCACTGG
CGCGATCCGTTCTCGGGACTCTATTATCCGGGTTCCATGCATGGCGCATG
TCATCCAGCTTTGTCTAAAGCGGCTTCTGGGGCATATCAAAGCAGCGCCT
CAGAATAAAGAAGTGGCAAATGTATGGTCAGACTCACAGATGAGTTATCT
CAGAAGTTCGGCTGATCATGAGGGCGTGGCTAGCACACTCGGAAAGGTCT
GTTTTCTGTTATCTGGTTGATAGAAAGGACGGAGCTAATGGGGTCTTCCA
ATAGATCAGGTCGTTTGCTACCTTTGTTAATGCAAGTCCCCAACGGCGGG
ATGCGTTCCTGTGTCTTCAGTCAGGTCGGACTCGACTATTTCCAATCCAC
GATGTGCAAACACGCTGGAACTCGACGTTCTTGATGCTCCGGCGGGCGCG
CAAGTTGCGAAACTATATTGATAAATACTGCAATGACCATGACTACTCGC
AATTCAGCATCACTGATGATGGATGGCGACAGATTGATTACCTCCTGCAA
TTGACCAAGCCATTCTTTCAGTTCACCATGGCCCTCATGAAGACAAAAGA
TGTCACGATCCACAGTGTGTTTCTCGTCTACAGAAAGCTGCTGGAACACA
TCGAACGGTCAAATCAACGCTTAAGCAACAAGACAACGCCATGGAAGCGG
GCCATGTATGATGCATTGCTTGCTGCGAAGCAAAAGTTAAAAGAATATTA
TGAAAAGACCTATCGCGATCATGGGTTTCTTTATGGTACAGGAACCTTGC
TCGCACCGCAGTACAAACTCTGCGCCTTTGATGACACGGAATATTCTAAA
TGCCAGAGCGAAACATCCAAACGCTACTGTGATTACTTGAGGAATTGCTT
TGCACAGTACAAACGCGAGACGCCCGAGATGTCGTTTCGGCCGATGCATT
CCTCTTGTCCACAGCAGGCGTCAGAGTTGGACCGGCTCCTCACCCCACTG
AGTACTTCCCAGCTGAGTGCAAGAAGCGAATACGACGAAGTAGACCGATA
TTTGAGAGAGGGTGAGCGAAGACCCTGAGATAATTGTTGCCTCATGGCAA
GCTGACTTCCGCAGGAACCGTCCAGCTGCCGCCGCGAGCCTATTGGAAAG
AGCACGAACATGAATACCCCGTTCTGTCGCGACTTGCTCGCGACTTGCTT
TCCGTTCCGGCCACTGGCGCTGGTGTCGAGCGTCTATTCAACACTGCGCG
AGATATCTGCCACTATCGTCGTGGGTCGCTCAATGAATCGACCATTCAAG
ACCTAATAATGTACAAGTGCTCAGAGATATTTAACCTGGACATTGAGACG
TTGAGCTGCCTTGAAAAATCATCGATTGAGGACGTCGATCAAGAGAGGCT
CGAGGAGGAGGAAGCCATCAAAACAAGTAAAGAAGAATTTGATCCAATCA
GTGATGACGAAGAGGGAGCAATTGAAGACGACGGCCGCGTACTTTCCGCT
GGAGATGTAACAAGCCGAGAATGTATGATGTCAGATGTTTCTCCCACGCA
TGACATCCACGAACAAGATGACGAGGAAGATGACGGGGAGAAGGAGCAGA
ACGAGGAGGAGGCTACTGACGATGAATTGCTTCCACCCCCAATTCAGCAG
CTCCGCGACAGATCTCAAAAAAGGTCCTCAGGGAGGGTCACAGTGCCATC
TAGTAGACTACAAGGTTACGAATTGTATTAGGGCGGGTCACGAATGTATA
GAGTATTAATATCACAATCACTTCATGAATTTCTTCGC back to topCoding sequence (CDS) from alignment at ch3:330819..334006+ >KJC3_013006-T3 ID=KJC3_013006-T3|Name=KJC3_013006-T3|organism=Aspergillus niger KJC3|type=CDS|length=5316bp|location=Sequence derived from alignment at ch3:330819..334006+ (Aspergillus niger KJC3)
ATGGCCATGGCCTCTACCACTTCGTGCTCATCGAGATCGATGTCTCATAC
ATTCAGCCCAGCGCTTTCGATTGAGCCATCATCCGATTCATTCCCAGACT
CAGACTTCCAAATATCGCCTTTTCCACATTCCAGCGAGAGTCTGGATGTC
CTTGCCGACAAGCCTCCACCAACCCTGAGACGCGTCGGATCTGACCGCAG
AAAAAATTGGCTTCTTTTCGAGCCAGCCCAAGAGGATGACTTCCTAAGTT
GGTGGCTCGACACTGAATATGGTCGACAAATGAACAGACACGGACGTGCC
CGGATCAGATGGTCGGTTGAGTCCCATTCCGCTGAAGTCTGGAAGCAGTT
CGACCAAGTGGCGGAGATACATTCAGGACGACCAAAAGTTATCTGCCGTA
ACTGCATGACGTTGCTAGATCACCCGCAACACAAATCACACGGGACAAGC
GCAATGGGCAAACATCAGAGATCTAGCTCCTGCCGCAAGGGAAAGAAAAA
GGTCTCACAGCAATCTCTTATCTCGGATTCCATCCAGAGGACCCCAGTTT
CTAGTTCTAGCCCAAACAAGTTCACGAAAGCGCAACTCGAGGAACAGCTC
CTGAAAACTATAACGTGCTTGCGGCTTCCCTTCCAAATTGTGGAAGATAA
TGAATTCCAGAGACTGCTCAACTTGGTCCGCTCTGGGCCCCAAGGAGTGG
AACTTCCCTCTGCAAAGACACTCCGTCGGAGACTGCGTGAAGCTGTTGTT
ACCCAACAAGAAATGCAACTGAGAGATCTTCCTGAAGATGCGAAAGTTTC
TCTCGCCTTGGACTGTTGGACCAGCCCATTCCAGCAAGCATTCATGGCTA
TCACAGTCTATTTCATTGATAAAGAGTGGAATTATAGAGAGTTGCTCCTT
GGTTTCGAGCCTCTGCACGGTCCTCATTCAGGGGTTAATCTGAGCGACGT
CCTGCTTCAGTTACTGCGGGAACGGCATCTTTTGAGTCGAATCTTCAGCG
TAACCACTGACAATGCGACAAACAACGAGACTTTGGTCCGAGCGCTGCAA
GAGACGCTTCTTTCCACTGGCGCGATCCGTTCTCGGGACTCTATTATCCG
GGTTCCATGCATGGCGCATGTCATCCAGCTTTGTCTAAAGCGGCTTCTGG
GGCATATCAAAGCAGCGCCTCAGAATAAAGAAGTGGCAAATCACACTCGG
AAAGGTCGTTTGCTACCTTTGTTAATGCAAGTCCCCAACGGCGGGATGCG
TTCCTGTGTCTTCAGTCAGGTCGGACTCGACTATTTCCAATCCACGATGT
GCAAACACGCTGGAACTCGACGTTCTTGAATGGCCATGGCCTCTACCACT
TCGTGCTCATCGAGATCGATGTCTCATACATTCAGCCCAGCGCTTTCGAT
TGAGCCATCATCCGATTCATTCCCAGACTCAGACTTCCAAATATCGCCTT
TTCCACATTCCAGCGAGAGTCTGGATGTCCTTGCCGACAAGCCTCCACCA
ACCCTGAGACGCGTCGGATCTGACCGCAGAAAAAATTGGCTTCTTTTCGA
GCCAGCCCAAGAGGATGACTTCCTAAGTTGGTGGCTCGACACTGAATATG
GTCGACAAATGAACAGACACGGACGTGCCCGGATCAGATGGTCGGTTGAG
TCCCATTCCGCTGAAGTCTGGAAGCAGTTCGACCAAGTGGCGGAGATACA
TTCAGGACGACCAAAAGTTATCTGCCGTAACTGCATGACGTTGCTAGATC
ACCCGCAACACAAATCACACGGGACAAGCGCAATGGGCAAACATCAGAGA
TCTAGCTCCTGCCGCAAGGGAAAGAAAAAGGTCTCACAGCAATCTCTTAT
CTCGGATTCCATCCAGAGGACCCCAGTTTCTAGTTCTAGCCCAAACAAGT
TCACGAAAGCGCAACTCGAGGAACAGCTCCTGAAAACTATAACGTGCTTG
CGGCTTCCCTTCCAAATTGTGGAAGATAATGAATTCCAGAGACTGCTCAA
CTTGGTCCGCTCTGGGCCCCAAGGAGTGGAACTTCCCTCTGCAAAGACAC
TCCGTCGGAGACTGCGTGAAGCTGTTGTTACCCAACAAGAAATGCAACTG
AGAGATCTTCCTGAAGATGCGAAAGTTTCTCTCGCCTTGGACTGTTGGAC
CAGCCCATTCCAGCAAGCATTCATGGCTATCACAGTCTATTTCATTGATA
AAGAGTGGAATTATAGAGAGTTGCTCCTTGGTTTCGAGCCTCTGCACGGT
CCTCATTCAGGGGTTAATCTGAGCGACGTCCTGCTTCAGTTACTGCGGGA
ACGGCATCTTTTGAGTCGAATCTTCAGCGTAACCACTGACAATGCGACAA
ACAACGAGACTTTGGTCCGAGCGCTGCAAGAGACGCTTCTTTCCACTGGC
GCGATCCGTTCTCGGGACTCTATTATCCGGGTTCCATGCATGGCGCATGT
CATCCAGCTTTGTCTAAAGCGGCTTCTGGGGCATATCAAAGCAGCGCCTC
AGAATAAAGAAGTGGCAAATCACACTCGGAAAGGTCGTTTGCTACCTTTG
TTAATGCAAGTCCCCAACGGCGGGATGCGTTCCTGTGTCTTCAGTCAGGT
CGGACTCGACTATTTCCAATCCACGATGTGCAAACACGCTGGAACTCGAC
GTTCTTGAATGGCCATGGCCTCTACCACTTCGTGCTCATCGAGATCGATG
TCTCATACATTCAGCCCAGCGCTTTCGATTGAGCCATCATCCGATTCATT
CCCAGACTCAGACTTCCAAATATCGCCTTTTCCACATTCCAGCGAGAGTC
TGGATGTCCTTGCCGACAAGCCTCCACCAACCCTGAGACGCGTCGGATCT
GACCGCAGAAAAAATTGGCTTCTTTTCGAGCCAGCCCAAGAGGATGACTT
CCTAAGTTGGTGGCTCGACACTGAATATGGTCGACAAATGAACAGACACG
GACGTGCCCGGATCAGATGGTCGGTTGAGTCCCATTCCGCTGAAGTCTGG
AAGCAGTTCGACCAAGTGGCGGAGATACATTCAGGACGACCAAAAGTTAT
CTGCCGTAACTGCATGACGTTGCTAGATCACCCGCAACACAAATCACACG
GGACAAGCGCAATGGGCAAACATCAGAGATCTAGCTCCTGCCGCAAGGGA
AAGAAAAAGGTCTCACAGCAATCTCTTATCTCGGATTCCATCCAGAGGAC
CCCAGTTTCTAGTTCTAGCCCAAACAAGTTCACGAAAGCGCAACTCGAGG
AACAGCTCCTGAAAACTATAACGTGCTTGCGGCTTCCCTTCCAAATTGTG
GAAGATAATGAATTCCAGAGACTGCTCAACTTGGTCCGCTCTGGGCCCCA
AGGAGTGGAACTTCCCTCTGCAAAGACACTCCGTCGGAGACTGCGTGAAG
CTGTTGTTACCCAACAAGAAATGCAACTGAGAGATCTTCCTGAAGATGCG
AAAGTTTCTCTCGCCTTGGACTGTTGGACCAGCCCATTCCAGCAAGCATT
CATGGCTATCACAGTCTATTTCATTGATAAAGAGTGGAATTATAGAGAGT
TGCTCCTTGGTTTCGAGCCTCTGCACGGTCCTCATTCAGGGGTTAATCTG
AGCGACGTCCTGCTTCAGTTACTGCGGGAACGGCATCTTTTGAGTCGAAT
CTTCAGCGTAACCACTGACAATGCGACAAACAACGAGACTTTGGTCCGAG
CGCTGCAAGAGACGCTTCTTTCCACTGGCGCGATCCGTTCTCGGGACTCT
ATTATCCGGGTTCCATGCATGGCGCATGTCATCCAGCTTTGTCTAAAGCG
GCTTCTGGGGCATATCAAAGCAGCGCCTCAGAATAAAGAAGTGGCAAATC
ACACTCGGAAAGGTCGTTTGCTACCTTTGTTAATGCAAGTCCCCAACGGC
GGGATGCGTTCCTGTGTCTTCAGTCAGGTCGGACTCGACTATTTCCAATC
CACGATGTGCAAACACGCTGGAACTCGACGTTCTTGAATGGCCATGGCCT
CTACCACTTCGTGCTCATCGAGATCGATGTCTCATACATTCAGCCCAGCG
CTTTCGATTGAGCCATCATCCGATTCATTCCCAGACTCAGACTTCCAAAT
ATCGCCTTTTCCACATTCCAGCGAGAGTCTGGATGTCCTTGCCGACAAGC
CTCCACCAACCCTGAGACGCGTCGGATCTGACCGCAGAAAAAATTGGCTT
CTTTTCGAGCCAGCCCAAGAGGATGACTTCCTAAGTTGGTGGCTCGACAC
TGAATATGGTCGACAAATGAACAGACACGGACGTGCCCGGATCAGATGGT
CGGTTGAGTCCCATTCCGCTGAAGTCTGGAAGCAGTTCGACCAAGTGGCG
GAGATACATTCAGGACGACCAAAAGTTATCTGCCGTAACTGCATGACGTT
GCTAGATCACCCGCAACACAAATCACACGGGACAAGCGCAATGGGCAAAC
ATCAGAGATCTAGCTCCTGCCGCAAGGGAAAGAAAAAGGTCTCACAGCAA
TCTCTTATCTCGGATTCCATCCAGAGGACCCCAGTTTCTAGTTCTAGCCC
AAACAAGTTCACGAAAGCGCAACTCGAGGAACAGCTCCTGAAAACTATAA
CGTGCTTGCGGCTTCCCTTCCAAATTGTGGAAGATAATGAATTCCAGAGA
CTGCTCAACTTGGTCCGCTCTGGGCCCCAAGGAGTGGAACTTCCCTCTGC
AAAGACACTCCGTCGGAGACTGCGTGAAGCTGTTGTTACCCAACAAGAAA
TGCAACTGAGAGATCTTCCTGAAGATGCGAAAGTTTCTCTCGCCTTGGAC
TGTTGGACCAGCCCATTCCAGCAAGCATTCATGGCTATCACAGTCTATTT
CATTGATAAAGAGTGGAATTATAGAGAGTTGCTCCTTGGTTTCGAGCCTC
TGCACGGTCCTCATTCAGGGGTTAATCTGAGCGACGTCCTGCTTCAGTTA
CTGCGGGAACGGCATCTTTTGAGTCGAATCTTCAGCGTAACCACTGACAA
TGCGACAAACAACGAGACTTTGGTCCGAGCGCTGCAAGAGACGCTTCTTT
CCACTGGCGCGATCCGTTCTCGGGACTCTATTATCCGGGTTCCATGCATG
GCGCATGTCATCCAGCTTTGTCTAAAGCGGCTTCTGGGGCATATCAAAGC
AGCGCCTCAGAATAAAGAAGTGGCAAATCACACTCGGAAAGGTCGTTTGC
TACCTTTGTTAATGCAAGTCCCCAACGGCGGGATGCGTTCCTGTGTCTTC
AGTCAGGTCGGACTCGACTATTTCCAATCCACGATGTGCAAACACGCTGG
AACTCGACGTTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013006-T3.utr5p1 | KJC3_013006-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037220 |
| DBxref | InterPro:IPR012337 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:330819..334006 + |
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