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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:387250..388406+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013007-T1 ID=KJC3_013007-T1|Name=KJC3_013007-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1157bp|location=Sequence derived from alignment at ch3:387250..388406+ (Aspergillus niger KJC3)
CGGCAACCTGCTTTACTACGGATCAAAGCGCGTGGGGTATTTTCTCGTCC
AGCGCAGTCATTTGTCTAATTTGACCTCATTCGCTCTGAACTCCACCACA
ATTTCTTAAGTCCATAGTCTCTGAAACTTGCCCACCTAGCCCGTGGTTCA
AGGCTCCTTTCCTTCAATGACACCGTCGCACAAAGTAGTATTGACTTGTG
GAACGTGGAAAACCCTGGGCAACGAGACATGTCGAGTGGTGGGCGATGTG
GGTAAGTTACAAGGGATTGTTGCATCAGTGCGACGGCATTCACCAGTGAA
CTACCTCAGGGCAACGAATCCTCCCATTTAAGTGTTTTCTGGTCTCCCCT
CCTCTTTCTTGTGGCCCGCAATGCTGTATGCCTTCCGTATGGCAGGCAAT
ACATGTACTGTATCTGGATCTTGCCATTTGCGTCGGTCTCTGCAAGCGCA
GTTCCCCCACTTACTTCACGTTTTGCGATTTCACTCTCGCTCCCCATGTC
CAAGAGACACTACCGGGCCTGGACTCCCGGCGAGGAACAGGACTATCCAT
CATGGGTAGCGCACCATCTCCATCTAACGTGGCCGGAGAGGGCTCGGAAA
TATTCAATCGAGCGCAAACCCAGAACGAAAGAGTCTCTGCGGACCAAATA
CCGGCTTCTGGAGAAAGACATAAGACGACACCGCCGCCCGATGTGCAAGA
CGCCATCGCGGCTCGGACGTCAAATCCCCAGGAGACTGGGCCGTGGCCAG
CACAGGACTTGGCCCAGTCCCATCTCGATCAGCACCCCCACTCCTTCCGA
GCATCGTTCAGACGATCCAAGCCCTCTAGCGATGCAGGTGATGAGGCCAC
CGGCCCCTACACGCGTCACACGTCCGCAGAACCACGGTCAGACCGCACGG
TCGACTCAGGGTCCGAAATTGACCATCCAGTCCCCAGCTAAATGTGCGCA
CCGTCGCGGGTTTGAGACGCATTGGGTTCGTAAGGGTCCGCGGGATCACT
CCGGTAAGAGCATGCCCCAAGCGGCGGTCGAAGCAGTCCGATGAATTGAC
AACCTTCTTTGTTGCAGGGTATGAGAAAGAATATAGAGTTCCGTCTCGGT
CGTTGGTTGCACCTTCCAAGATCGATTTGCAGTGGCAGTTATTATACCAT
ATCTGTG back to topCoding sequence (CDS) from alignment at ch3:387250..388406+ >KJC3_013007-T1 ID=KJC3_013007-T1|Name=KJC3_013007-T1|organism=Aspergillus niger KJC3|type=CDS|length=642bp|location=Sequence derived from alignment at ch3:387250..388406+ (Aspergillus niger KJC3)
ATGTACTGTATCTGGATCTTGCCATTTGCGTCGGTCTCTGCAAGCGCAGT
TCCCCCACTTACTTCACGTTTTGCGATTTCACTCTCGCTCCCCATGTCCA
AGAGACACTACCGGGCCTGGACTCCCGGCGAGGAACAGGACTATCCATCA
TGGGTAGCGCACCATCTCCATCTAACGTGGCCGGAGAGGGCTCGGAAATA
TTCAATCGAGCGCAAACCCAGAACGAAAGAGTCTCTGCGGACCAAATACC
GGCTTCTGGAGAAAGACATAAGACGACACCGCCGCCCGATGTGCAAGACG
CCATCGCGGCTCGGACGTCAAATCCCCAGGAGACTGGGCCGTGGCCAGCA
CAGGACTTGGCCCAGTCCCATCTCGATCAGCACCCCCACTCCTTCCGAGC
ATCGTTCAGACGATCCAAGCCCTCTAGCGATGCAGGTGATGAGGCCACCG
GCCCCTACACGCGTCACACGTCCGCAGAACCACGGTCAGACCGCACGGTC
GACTCAGGGTCCGAAATTGACCATCCAGTCCCCAGCTAAATGTGCGCACC
GTCGCGGGTTTGAGACGCATTGGGTTCGTAAGGGTCCGCGGGATCACTCC
GGTAAGAGCATGCCCCAAGCGGCGGTCGAAGCAGTCCGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013007-T1.utr5p1 | KJC3_013007-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013007-T1.utr3p1 | KJC3_013007-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:387250..388406 + |
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