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KJC3_013011-T1, KJC3_013011-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013011-T1
Unique NameKJC3_013011-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:577393..580611-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013011-T1 ID=KJC3_013011-T1|Name=KJC3_013011-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3219bp|location=Sequence derived from alignment at ch3:577393..580611- (Aspergillus niger KJC3)
CTTCTTTCCCCCTCCCCCTCCGTCGTCGTCGCCGCCCCCTGTCACCCGTC
GCCTCCTCGCCCATCCCGTTCGCCCGACGCACAGCCCCCTTCGGTCGTGC
CGTGCGATCCGGCGCTGTTTCTGGCAATGCCTCCACCGTGCGAATTTGCA
GCCGACATGGCTTTGTGTGAGCCTTGGCCGGGATCGCGATCAATCCCCCC
TCCTACGTCGTTATGATCCGTTCGTTACCTTCCCACCTACATGGGACGCT
CACCGGTCGACTTACTATCTTCGTCGCTGAGGCCAGTATTATCGAATCGC
CATCCAAGACCGCTCTGGTTCTCTCAGTATGGCCGTCTCAATGTCCTCCC
AATCCTCTGTTTTCCTTTCATCTCGCTACCCCGGCTCAGCTCGGGTGTCC
GTGTTCAAGGAAACGACCCACTTGGCGTGCTGCGCAGCCATCATGCGATG
TGCCTGAAATTTGCGTCGAATCTCCACTGGCCGTGGGCTCGACCGCCCTT
CGCCGATGTGACCTTGTGACAGTACGACACTACCTGCCTCAGCTGGCGCG
GGCGACCAATAGCGAAAATCCCGCATTACTTCGCCCGGACTTGCTTCAGG
ATGCGAAGCACAGTCCGGCCAGATAGCGTGCTTGGAAGACGCATGGATCG
ACCAAGGCTGGGAACGAACAACTGCGAAGCTCAGGACACTACGACTCTAC
CCTATCGCAACTGGCATGGGCGACCAATGGCGAAAATCACGCATTCCCAT
CCTCACCCTGCCTCGTCTCGAGATGTGAGGCACTGCCCGATCAGGTAGCG
TGCTTCGAAAATGCGTGGATTGGCCTAGACCAGGAATGAACAACCGTGAA
GGATCGCCATTGGCCTTAATACGCTGAATGAGGCAGCTGACCTTGGAGGA
GAAAGTGGAGGTAGTCGCCCGGCCCGGGGGGGGGGGGTGAACGATGCCGT
CTTGGACGAAAGCTGACATGCAATCGCGCAACCGGGACGGGATGAAATCA
AACGCACGTAGTAGAGTCTTCATCGAATGTGCTGTCCTTGCGTGGCATGG
GCACGGCCCTCAACCGGGGAGCAAGAAATTCAGCGCGGCGGGTTTGGTGT
CTTACCAAACTTCAAGGACTAGCGTTGTCTAGAGCTTCCGTTGCCTATAA
AAGGGCTGACGAATTCCCAAGGAATGTAGCTCAAAAGATCACTCACTTCC
CAGCCGAGTTCAGCCCAAAACCTGTCCCTATTCACTCACCACTACGCGTT
CCTATCCCCCGTTCCTCTGTTCCCTCCATTTTTCTGAACCCCACCATTCA
CTGCCCTAGGTCAGCATAATGTTCAGCTTCCATGTTGATAGCTTCAGACC
TTGGAAAGGCCCCGCCCCCACCAATACAAGCACATCCACCTCCCAGAGCC
CCAAAAGATCCCCTGTCCCTGCTGCTGTCAATACTATTCCTGCAACCGAT
CCAAGGCCCTTCAGTCACTGCCGCGAGAAAGGCTTGCCAACTCCCCCAAA
TCAACCAAGCAAACATCCACTTCCCGCTCGTCCACCAGCTGAAGTGTGTG
CTCATGCCAACATGCGCTCTAGCACCATACCTTATTCTCATTTTCAACGT
CTCTCAAGTCCTCAACCTGCTTTCAAGGTTGAGGATACGGTTCAGCCTAC
CTCCACAGAGCTTCACGTCTCATCTCCGACATCTCTCCATCCCTCGGCTG
CTACAGATTGCTCGAAAGGGGATAGCGAATCCCAGCCCGAAATTCGAGCA
GACATACTCCGAGATGGCATCCTCGCAGGTGATACGCACAATGGCTGCAT
GGGTGTTTACGATGAGGGCTCTAAAACCCTCGACGCACCGAACACTTTGC
CGGTTGACTTTGAAGAAACCATGTTCGATGAAGATTTCATGGAGACCGGT
CAGCCACGTCAGACTACCAACGGTACTTATCTGTTCACTATGGATGAGTT
ACAAGCCGATTCGCCTTATGTCGACGTTTCGCTGGATTCACCACCCCTAC
GTGATCATAAACAGGATTTCGGCGAATCGCCTCTTAACGGTTATGACACG
AACTGTCTGGCTGGATCTTTTCGGAATCAAAGCACACATCAGAATCCCAC
TCCACATGACTATGAGATTATCGCGAGACAAAACGGCAGCGAGGAAGCCG
GCGGTTGTAGCGAGAAATCGACAACCTGCAAGCGAATTTCTGTTGAAGTT
GAGTCGGAAAGGCTACCGCCCAAACGTCTCAAAACGGACCAATGCTCAAG
ATCTCCCAGTCCTGGCACCGTGGATAGTCCCCTTGAAGACTTTTCAACCC
ATTTCGATGCCACAAACATGATTCCCATCAACTCAGCGATCATCTCGCCC
GATGAATATCATCAAGGAGCTAATAATACATCTCAAGTCATCCAGCTTGC
TAATACCGGCACAAGCGATCAAGGGGCATTCCGTATCCGTCGCAGTTGTC
CACTCAACCTACGATCTGCACAAACCCATTCCGTGAGTGCCGATGAAAAC
GGTGTCAAGCAGAAACTCAGACGGAGTGTTCGCCAAAAACCTCAAGTCGC
GGTGGAATCGGATGGTCCAGATAGTATCCCAACAAAACCTACTCTGTCAA
ACTCCGACAAGCCACCGGCCCAGCGGATTAAACCAAGAAAGTCAAGATGG
CGACCTGCCAAGAAGACATCAATCGCGAAGGCTACACCACGCGATAATGA
ATACAAATTCACGTCCCTCCGGTCGCTCTTCCTGTCGACGCCGTTCGACA
TGCGTTTGCAATTTATCTCGTTGCTGTTCGAGGCTGTGCTACCTCGCTGC
ATGCACGATTCCAAGGCTGTCACCAACAGTCCATCTCAGGTGTGCAATGC
GGGTGGTGAAGAGGAATGGGAGGTTGAGGAGGTAGTAGCCTCGCGAGTTT
TTCGCGGGAGGCTCCAGTACCAAGTACGGTGGAAAGTATGTGAACCTGAC
GAGACTTGGTATCCAGCACATGGTCTCAAAGGTGCTCCATACAAGGTGCG
AGACTTTCACGCCACATGTCCGCATCAACCTGGGCCCCCAGTGCATTTAG
ATCTGTTAATTAGAAATATCGAAATCACTTCACAACCCAACTTCGTTTTC
TCACATCCCATAGGAGTCCGATCAAATGTCGTGCCATACTAAAATGCGCT
TCATTCTAAGCTTTACTGTTTCCAGTGTTCAGTCCAGATTAGGAATCGTC
TTTAGATTATCAAAATATG
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Coding sequence (CDS) from alignment at ch3:577393..580611-

>KJC3_013011-T1 ID=KJC3_013011-T1|Name=KJC3_013011-T1|organism=Aspergillus niger KJC3|type=CDS|length=1824bp|location=Sequence derived from alignment at ch3:577393..580611- (Aspergillus niger KJC3)
ATGTTCAGCTTCCATGTTGATAGCTTCAGACCTTGGAAAGGCCCCGCCCC
CACCAATACAAGCACATCCACCTCCCAGAGCCCCAAAAGATCCCCTGTCC
CTGCTGCTGTCAATACTATTCCTGCAACCGATCCAAGGCCCTTCAGTCAC
TGCCGCGAGAAAGGCTTGCCAACTCCCCCAAATCAACCAAGCAAACATCC
ACTTCCCGCTCGTCCACCAGCTGAAGTGTGTGCTCATGCCAACATGCGCT
CTAGCACCATACCTTATTCTCATTTTCAACGTCTCTCAAGTCCTCAACCT
GCTTTCAAGGTTGAGGATACGGTTCAGCCTACCTCCACAGAGCTTCACGT
CTCATCTCCGACATCTCTCCATCCCTCGGCTGCTACAGATTGCTCGAAAG
GGGATAGCGAATCCCAGCCCGAAATTCGAGCAGACATACTCCGAGATGGC
ATCCTCGCAGGTGATACGCACAATGGCTGCATGGGTGTTTACGATGAGGG
CTCTAAAACCCTCGACGCACCGAACACTTTGCCGGTTGACTTTGAAGAAA
CCATGTTCGATGAAGATTTCATGGAGACCGGTCAGCCACGTCAGACTACC
AACGGTACTTATCTGTTCACTATGGATGAGTTACAAGCCGATTCGCCTTA
TGTCGACGTTTCGCTGGATTCACCACCCCTACGTGATCATAAACAGGATT
TCGGCGAATCGCCTCTTAACGGTTATGACACGAACTGTCTGGCTGGATCT
TTTCGGAATCAAAGCACACATCAGAATCCCACTCCACATGACTATGAGAT
TATCGCGAGACAAAACGGCAGCGAGGAAGCCGGCGGTTGTAGCGAGAAAT
CGACAACCTGCAAGCGAATTTCTGTTGAAGTTGAGTCGGAAAGGCTACCG
CCCAAACGTCTCAAAACGGACCAATGCTCAAGATCTCCCAGTCCTGGCAC
CGTGGATAGTCCCCTTGAAGACTTTTCAACCCATTTCGATGCCACAAACA
TGATTCCCATCAACTCAGCGATCATCTCGCCCGATGAATATCATCAAGGA
GCTAATAATACATCTCAAGTCATCCAGCTTGCTAATACCGGCACAAGCGA
TCAAGGGGCATTCCGTATCCGTCGCAGTTGTCCACTCAACCTACGATCTG
CACAAACCCATTCCGTGAGTGCCGATGAAAACGGTGTCAAGCAGAAACTC
AGACGGAGTGTTCGCCAAAAACCTCAAGTCGCGGTGGAATCGGATGGTCC
AGATAGTATCCCAACAAAACCTACTCTGTCAAACTCCGACAAGCCACCGG
CCCAGCGGATTAAACCAAGAAAGTCAAGATGGCGACCTGCCAAGAAGACA
TCAATCGCGAAGGCTACACCACGCGATAATGAATACAAATTCACGTCCCT
CCGGTCGCTCTTCCTGTCGACGCCGTTCGACATGCGTTTGCAATTTATCT
CGTTGCTGTTCGAGGCTGTGCTACCTCGCTGCATGCACGATTCCAAGGCT
GTCACCAACAGTCCATCTCAGGTGTGCAATGCGGGTGGTGAAGAGGAATG
GGAGGTTGAGGAGGTAGTAGCCTCGCGAGTTTTTCGCGGGAGGCTCCAGT
ACCAAGTACGGTGGAAAGTATGTGAACCTGACGAGACTTGGTATCCAGCA
CATGGTCTCAAAGGTGCTCCATACAAGGTGCGAGACTTTCACGCCACATG
TCCGCATCAACCTGGGCCCCCAGTGCATTTAGATCTGTTAATTAGAAATA
TCGAAATCACTTCACAACCCAACTTCGTTTTCTCACATCCCATAGGAGTC
CGATCAAATGTCGTGCCATACTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013011KJC3_013011Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013011-T1KJC3_013011-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013011-T1.cdsKJC3_013011-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013011-T1.utr3p1KJC3_013011-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013011-T1.exon2KJC3_013011-T1.exon2Aspergillus niger KJC3exon
KJC3_013011-T1.exon1KJC3_013011-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013011-T1.utr5p2KJC3_013011-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_013011-T1.utr5p1KJC3_013011-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016197
DBxrefInterPro:IPR000953
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:577393..580611 -
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