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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:634303..636541+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013014-T1 ID=KJC3_013014-T1|Name=KJC3_013014-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2239bp|location=Sequence derived from alignment at ch3:634303..636541+ (Aspergillus niger KJC3)
GGTTTGGCCAACCGCTAACTGCATGCCAGCTGCCACAGCACAGCGTTCTG
TCCTTGAGTTTGGTTTCCACCAGATTATATGCCGCCCTGTTCCCGCGGCT
TCATCGAACCATCACCTTCCGTGCGAGGAATGAATGGGCTTTGAACATTT
TCGATGTCCATCCCTTTTTTCGGGACCACTCCGGCCCCCGCGCCGGCGAA
ATTCTCCAGCATGCCCGGCAGATACGGTTCAGCGCTCCTATTCACATTGC
TAGGTTCCACCGTTGTGTATACAACAGTCACTTTTTCCTACCGGCCTCGT
CCCACAACCGACCTACACTTGGAAGCCCGCACGAGTCGACAGCCCATCAA
GCCTTTCTCAATGATTTGTCTTATCAGATAGATCAGGTCTTTGCGGGACT
GGAGACCGTCTTCATCCGCTCGTTTCAGTATGTATGAAAGGCATGAGCCG
CTGGACTCGCAACTGACTTGTCGCATGTGGTGCGTAGGGACCTGCCTTCC
CGCCGGGATTCTGGACACCAACGGATACCTGGTCCGCCACCAGCAACAGA
TCCATTCGCTTTCCTTGATCACAGACGGCACCTGTCCTCATGCCGGCCGT
CGTTTAGAGGGCCTGTCGAGTTTGACGGCCTTGACTGACCTGGAATGGGA
AGGCATCCAGCATCCATTCGAAATGCGCACCTTGTGCGACTGTCTCCGAC
AAAATCATCGGCGGCTGAAGGCGGTATCCATTGGACTTCTGTTGAATCCG
AACGTACCCACATCCCATGAGGATATTCTGAAGGTCTTCTGGCCACCTCG
AGCGCAGGACGACTGCACGCCGGGCGAGCGGGAATGGTTCCCATCTCTCA
CATCCTTGACATTCTCTCGCGTCCCGTTCCCCGACAGTCTGCTGCAGGGC
GGCCAACCGTCACCGTTCCGCGCGCTCAAGGCACTAACGATCCGAGACTG
CCCCAACGAGCAGCGCTTCCTGCAGCTGTTGGCGCGAGCCAAGGATCCGT
TGTCCCTCCAGCACTTCGAGATCAGCAGCGACTACCTGCGCGATTCAGAA
GACCGATTGGCGTCCATTGCGATCGTCGAATTTCTACTCTCATTTCGTGG
CTTGCGACGGCTGTACCTGAAGGTGGCCAACTTTCCCCGGTTCCTGCCGG
GTCTTGGCGATGCCATCAAACATCACCAAGCCACGCTCCACGGTCTGGTT
TTTCACGAGCGTCGGCTGATGCCAATCGACGCTGAAAGGCTGTTTGAAGA
TCTTCGCGATGTGAATATGGCATCCCCCAATATCCCGCAAATTCTACGGC
ATAGTTCCCCCGCCGCTCTTGGCCTCTGTCTCCGCCCGGTCATCGCGGTA
AGTGTATCGTTAGCACCCATCCCCACGGCTATATGAGCTGACCCACTGTA
GCGAGGTATGCTCTTGGACATCCCGGAACGCTCGTCAATAAAATTACTCC
ACCTCCGGTTAAGCGGAGAGGAGAGGAAGCATCGGCATCTCCGCAGAGAG
ATCGTCTCAGAGCTGCGGAGAATTGCGGAAGGGGGGCTATGGTCCAGGTC
GAGGCATGGACCAACAGTCGCAGGCCTCCACCTCAAGCCCGCTCGGAAAC
GGTCGGAAGCCCAAGATTTCCTCCTGCTTGCTCAGTGGGCTTTTGGACCT
ACGGGACTTCCTGCCTTGCAGATACTCGCCTTCGGTGACTTTTCGCACGA
TGGCCGCTATAGAGAACAACAGATCTTGATCCGGCGGAGGAGCATCAGTG
AGCAGCCTTACCCGAGAGTTTCATCGGACGGGGAATACAGCATAAGCTCA
TCCTTTTGCCTGGTCGATAGGGACGACCATTCTCTCTGGGACGACCTGCC
ATTGGATGGGACTCAGTTTCTGTCCGCATGTCCAAGCACGGGGTTGATGG
AGTCCCCCTACGACCTTTAGCATGGTATCTTTGGAGTTCCTTATATTTGG
CGTGTTTACATTCGCGCGTTGGAAGGGCGGCAATCTGTTGTAGATTGCGC
TTCTGATATAAGCGCCGCCGAAATATGCCTTTGGCAGTTGTTGCTTATTA
GTTGTGCGCCGACAGCGCCATTGTAGGAGGCTAGGGGGCGCGATCCTGCT
TGCTTTATCTCTCACCGCCTGCTGCCTGGGCTGAGAAGGCTTCCAGCAAT
GCTAACGGTTGGCTATACTGGGATTTTCCTTAACAGTAGGCTCTCCTTTC
TAGGGACGCAGACATCCAGGTTTGCCTGTGGCTTATGGC back to topCoding sequence (CDS) from alignment at ch3:634303..636541+ >KJC3_013014-T1 ID=KJC3_013014-T1|Name=KJC3_013014-T1|organism=Aspergillus niger KJC3|type=CDS|length=2874bp|location=Sequence derived from alignment at ch3:634303..636541+ (Aspergillus niger KJC3)
ATGTATGAAAGGCATGAGCCGCTGGACTCGCAACTGACTTGTCGCATGTG
GTGCGTAGGGACCTGCCTTCCCGCCGGGATTCTGGACACCAACGGATACC
TGGTCCGCCACCAGCAACAGATCCATTCGCTTTCCTTGATCACAGACGGC
ACCTGTCCTCATGCCGGCCGTCGTTTAGAGGGCCTGTCGAGTTTGACGGC
CTTGACTGACCTGGAATGGGAAGGCATCCAGCATCCATTCGAAATGCGCA
CCTTGTGCGACTGTCTCCGACAAAATCATCGGCGGCTGAAGGCGGTATCC
ATTGGACTTCTGTTGAATCCGAACGTACCCACATCCCATGAGGATATTCT
GAAGGTCTTCTGGCCACCTCGAGCGCAGGACGACTGCACGCCGGGCGAGC
GGGAATGGTTCCCATCTCTCACATCCTTGACATTCTCTCGCGTCCCGTTC
CCCGACAGTCTGCTGCAGGGCGGCCAACCGTCACCGTTCCGCGCGCTCAA
GGCACTAACGATCCGAGACTGCCCCAACGAGCAGCGCTTCCTGCAGCTGT
TGGCGCGAGCCAAGGATCCGTTGTCCCTCCAGCACTTCGAGATCAGCAGC
GACTACCTGCGCGATTCAGAAGACCGATTGGCGTCCATTGCGATCGTCGA
ATTTCTACTCTCATTTCGTGGCTTGCGACGGCTGTACCTGAAGGTGGCCA
ACTTTCCCCGGTTCCTGCCGGGTCTTGGCGATGCCATCAAACATCACCAA
GCCACGCTCCACGGTCTGGTTTTTCACGAGCGTCGGCTGATGCCAATCGA
CGCTGAAAGGCTGTTTGAAGATCTTCGCGATGTGAATATGGCATCCCCCA
ATATCCCGCAAATTCTACGGCATAGTTCCCCCGCCGCTCTTGGCCTCTGT
CTCCGCCCGGTCATCGCGCGAGGTATGCTCTTGGACATCCCGGAACGCTC
GTCAATAAAATTACTCCACCTCCGGTTAAGCGGAGAGGAGAGGAAGCATC
GGCATCTCCGCAGAGAGATCGTCTCAGAGCTGCGGAGAATTGCGGAAGGG
GGGCTATGGTCCAGGTCGAGGCATGGACCAACAGTCGCAGGCCTCCACCT
CAAGCCCGCTCGGAAACGGTCGGAAGCCCAAGATTTCCTCCTGCTTGCTC
AGTGGGCTTTTGGACCTACGGGACTTCCTGCCTTGCAGATACTCGCCTTC
GGTGACTTTTCGCACGATGGCCGCTATAGAGAACAACAGATCTTGATCCG
GCGGAGGAGCATCAGTGAGCAGCCTTACCCGAGAGTTTCATCGGACGGGG
AATACAGCATAAGCTCATCCTTTTGCCTGGTCGATAGGGACGACCATTCT
CTCTGGGACGACCTGCCATTGGATGGGACTCAGTTTCTGTCCGCATGTCC
AAGCACGGGGTTGATGGAGTCCCCCTACGACCTTTAGATGTATGAAAGGC
ATGAGCCGCTGGACTCGCAACTGACTTGTCGCATGTGGTGCGTAGGGACC
TGCCTTCCCGCCGGGATTCTGGACACCAACGGATACCTGGTCCGCCACCA
GCAACAGATCCATTCGCTTTCCTTGATCACAGACGGCACCTGTCCTCATG
CCGGCCGTCGTTTAGAGGGCCTGTCGAGTTTGACGGCCTTGACTGACCTG
GAATGGGAAGGCATCCAGCATCCATTCGAAATGCGCACCTTGTGCGACTG
TCTCCGACAAAATCATCGGCGGCTGAAGGCGGTATCCATTGGACTTCTGT
TGAATCCGAACGTACCCACATCCCATGAGGATATTCTGAAGGTCTTCTGG
CCACCTCGAGCGCAGGACGACTGCACGCCGGGCGAGCGGGAATGGTTCCC
ATCTCTCACATCCTTGACATTCTCTCGCGTCCCGTTCCCCGACAGTCTGC
TGCAGGGCGGCCAACCGTCACCGTTCCGCGCGCTCAAGGCACTAACGATC
CGAGACTGCCCCAACGAGCAGCGCTTCCTGCAGCTGTTGGCGCGAGCCAA
GGATCCGTTGTCCCTCCAGCACTTCGAGATCAGCAGCGACTACCTGCGCG
ATTCAGAAGACCGATTGGCGTCCATTGCGATCGTCGAATTTCTACTCTCA
TTTCGTGGCTTGCGACGGCTGTACCTGAAGGTGGCCAACTTTCCCCGGTT
CCTGCCGGGTCTTGGCGATGCCATCAAACATCACCAAGCCACGCTCCACG
GTCTGGTTTTTCACGAGCGTCGGCTGATGCCAATCGACGCTGAAAGGCTG
TTTGAAGATCTTCGCGATGTGAATATGGCATCCCCCAATATCCCGCAAAT
TCTACGGCATAGTTCCCCCGCCGCTCTTGGCCTCTGTCTCCGCCCGGTCA
TCGCGCGAGGTATGCTCTTGGACATCCCGGAACGCTCGTCAATAAAATTA
CTCCACCTCCGGTTAAGCGGAGAGGAGAGGAAGCATCGGCATCTCCGCAG
AGAGATCGTCTCAGAGCTGCGGAGAATTGCGGAAGGGGGGCTATGGTCCA
GGTCGAGGCATGGACCAACAGTCGCAGGCCTCCACCTCAAGCCCGCTCGG
AAACGGTCGGAAGCCCAAGATTTCCTCCTGCTTGCTCAGTGGGCTTTTGG
ACCTACGGGACTTCCTGCCTTGCAGATACTCGCCTTCGGTGACTTTTCGC
ACGATGGCCGCTATAGAGAACAACAGATCTTGATCCGGCGGAGGAGCATC
AGTGAGCAGCCTTACCCGAGAGTTTCATCGGACGGGGAATACAGCATAAG
CTCATCCTTTTGCCTGGTCGATAGGGACGACCATTCTCTCTGGGACGACC
TGCCATTGGATGGGACTCAGTTTCTGTCCGCATGTCCAAGCACGGGGTTG
ATGGAGTCCCCCTACGACCTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013014-T1.utr5p1 | KJC3_013014-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013014-T1.utr3p1 | KJC3_013014-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:634303..636541 + |
|
