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KJC3_013016-T3, KJC3_013016-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013016-T3
Unique NameKJC3_013016-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:661108..666485-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013016-T3 ID=KJC3_013016-T3|Name=KJC3_013016-T3|organism=Aspergillus niger KJC3|type=mRNA|length=5378bp|location=Sequence derived from alignment at ch3:661108..666485- (Aspergillus niger KJC3)
GCAAGGAGGCACCCTCGCGGTGTACAATAGACGGGGAATTACGGACTTTT CTCCACTTGTCGATGAGATCCAATGGGTAATGACTGTGTGGTGTCGAACC CTCCGAGGCTAGATTATACAGTAGCGCCGTTACGCAAAATCAGCAGTCAA CGAGAGAGGTAAGCCAACTCACTGTGTTTGGAAAGCGTATGTACTTGCTC ACTAATTTCTTGGTTGTACAATTTCATCTCCGCAAGATAGTACAATGGAA GCATCTTCTACAGTACCTATATAAACGGATTGTGAGTATCGAGAGTGATG CAACTGAAATAGTTGACTCCACTAGTTAAGGATTGGAAGGGGCATCGAAC TTTTCTAACTACTACTACAGCAAATTTAGGTATCTTCGAACCAGCGCATT TTGCGGGGTCAACTGAGCCTAAACCGACGTATATTGCTGCCTGAGGCACC GATGGACTCCGGCCGAAGGGGTGAGTAAGCTGGTAAACAACCCGACACGC AATTCTCTCCCGACTCTATTTCCCGCGCCGGATAGAGCCTCCTCCGCTGT TGAGTTGCTTTCGCTCGATTATCGGCCGAGCAACTCTTCGAAACGGGATG GAGGAAACAATAGCCGAATTACGACGTCAGATTGAAGAACAACAAAGGCT GCGAGAAGCGGCAGAGCGCCGTGAGGAGGAAGAGAGACAGGCGCGAGAAG AGGCAGAACGCCGTGAGGAGGAAGAGAGACAGGCGCGAGAAGAGGCAGAA CGCCGTGAGGAGGAAGAGAGAGAGGCGCGAGAAAACGAGAGGCAAGCACG AGAAGCGGCAGAACGCCGTGAGGAGGAAGAGAGACAGGCGCGAGAAGACG CTGAACGTCGAGTGCAACCCAACTCCCTGTTTCGCCTCCTCGATCGCTGC CACAATTCTCTCTCCCAAGCGATCCGAGTTGAGGCAGATGCCACCCTTAC TACTCAGGGCGACGCGGCCGATCCTGTGAATCGACTCTACCCCAAGCACA TCATCCCTTGGCGTAACTTCCCCCAACTACAGGAACAGATCTGGGACAAA TTCGACCGTAATAATGCCTTTACCACGCGCCCACTATTCCCCTCTGATAC CCAAATCGATTATGTCGTCATGAATATCCAGAACAGACCAATCTATTCGG AAGCCTCTCTTCGGAATTTCGAGCGGGACACGGTGGACAACTTTGTTGAA AAGGTCATTGAGGTTTTGCGAGACGATGAACCCCTTCGAGATGAGTTTGG AATCCAAGGCCGAGTCAGCTTCTATGATCGCGCAAACCCATTAGAAACTT CGCTCGAGAACAGCCTAGATCAAATGAATCTCGAGGACGCGCAGACACCC CAACGACCGGCGAACACGAGGCGTGGAAGAAGCCGGGGACGAGGGAGAGG AGCCGTGCGGAGACAGATGAGGGATGGCACTGCGCGACGACGCAATCGGC GCGCCGACCAGTTCTGCGTGCACCTTGTGGCGGATGAACGGAAAATGCCG GTGTATGCAGTGGAGTTCAAAGCGCCGCACAAAGTGACGATCCCCGAACT GGTGGCGGGTCTACACCCGATAGATCTGGATCGCGAGGTCATTGACCAAG AGGGCGACACGTTTGAGTTTTATGCCACCCGCCTGGTCGCGGCCGTGGTC ATTCAGATATTCTCATACATGATCGACAGTGGCGTTCGATACGGCTACAT CTGCACCGGGGAGGCTTTCGTGTTCCTTCATATCCCAAAGGATGATCCCA CCATTATTCAATATTTCTTGTGTATCCCGAATCAGGATGCGCAGGCGGAT GTGCAGGCGGACGATGAAGTGCGCCTCCACCGGACTGCCATCGGTCAGGT GCTTGCGTTCACGCTTCAAGCGCTGGCCGTCGAACCTCCGACTCAACAAT GGCACGATGTGGCACACGACCAGCTAACAAGCTGGAAGGTCGAATATCTC GACGTGTTGAGACAAATTCCCGAAACTCTCCGTAAAGACCCGCCGGCGTC TAATTATCGGCCCTCTCACTGGAAACCAGTTCGGAAAATACACTACACAC GCGCTCGCGCTCGCGCTCGTTGTCAACCGGGCGCATCGACACCGAAGCAC TCGTCCACTGAAGGCAGCGGCAGTGATCAAGAATCGCATTCGCCATCCGC CGCAGCCGCGTCCCGCATCCGATCAAGCCAGGGCCAAGGCAACCACCGCC AATCCACCCGGGGAGGTGAAAGGACACGAGCCGGCCGAGACCATAAACAG ACCTCTCGGCAAGACAGACATTTTACGCGACCATACTGCACCATGGCCTG CATCCGCGGCTTGGCTAACCGAGAACCACTGGATCAGAATTGCCCCAACT GGGAACTCCACGGTGGTCCAAGACACTCCATCGGACCGCAGGAGTTCACA CGTCAGCTCCATCGTCAACTGGCCCGAGATCGGGAGCTTGGATTCGAACA GCTACACGTGTGTGGTCGGACGGGATATCTCATTAAAGCCACCCTCCTTT CCTGCGGATACACGGTGATCCTGAAAGCAACGACTGTGGAGAAGCAGCAT CGCCTTCAAACGGAAGTGGACAATTATCACCGGCTCCGGAACTTGCAGGG ACAATACATCCCTGTCTGTCTTGGGGACTTTCAGCCTCGCGTTGCATATT GGTACCACGGCAGGTTAATGGCGCAGATGATGATCTTGAGCTGGTCTGGA ACGCGGCTTCAGCATACCATCCATGATGGCAATTCCCACTTCTTTCACCA AGAGCGCGACAAAGCTCTGACCGTGCTCCGGTCGCGTGGAGTTATCCACT GCGACAGTGAGTGGCGCAATATGCTGTGGGATGACCTGAGTGGCCGCTTG GTTGTCATTGACCTAGAGGATGTGCAATGGTTGAAGCGCGCTAGGGCCCT TGAATCCGTCTCTGCGAATACGCGGCGAACTCGTTGCGTCAGAGCGATGA AATATAAACCCGGCTTGGAAAGGGTGGACATTCCGCAACACGGCAGTACC TTAAGCTTGTAACTGTATGTTCAGAAACGTTGCAAAGCATTCCGCCACAA GACGTCGTGGCTTTAACTTACACCGAGTACTAAATATACATTTTGCAACA CGAACCCTACATGTTACAAGAGCGCGACTGCACAGCAGGCTTGGGCGGTG GAATTATCTACACGACCTTCCCAGGCTTTGCAGTTAGAGATACATCCCAT CAACCATCCCCCGTTGACCGGCCTCCTTCGAAAATCTTTATTCGATTTCA CTGTTAGCTCAAGTGCTTGGAGATCACTTGGTTGGCGTCCGCCTCAGCAA GAGCATGTGCGATGGCCACGATGTTTTTGATCTGGCTCAAGTTAGCAAGT GAGGGGTGAACAATGAACAGCAGCGCTCTGGTACCCACCCCGCGTCCATT TAGAGCCAAAAACTACAATTGTCGAAGGTTGTTCCTCACCACAACAGATC CTTGCTTCGTACATGCCCTGGACAGAAATGTTGACCAGAGATCTCTGCGA ACTGACTCGTTGAATTCTCATAGTCAATGGTCAAATGGGTCCGGGCGAGA TTGCATCATCAAACTAGATACCCCGATTCAACGTCAAGGAAATGCCTCCT ACCATTCCAGCTTCCGGAGGAAGATGGTCACAAGGGGATTTTGAGTATTG TGGTAAGATGCACGCTACTCCATGAACGTAGCAATCTCATCCAAGCGAAG CATGCCATCAAAATGTTTGTCGATCTTGAATACTGCTTCAAGCTGTTGCT CAAGCGCATTCGAATCGCCGTGGTCGACTTGGCGTTTCCATCGATTACGT TGTCGAACGGTACCGTCGGTATCAGACCCAGGGTGGTTTTCGCCAATGAG AAGAGCAAGGTCTTAGTTTCTGGAGGGAACTAAAAGCAGTTGAATGATTC GAGTATTCAGTGAGCAAGCGGTGTTGGTGCTACAGATAATCCAGAAACTG CCTTTACTATCTATACTTCTCTATTGATTCCCAAACCCTAATGCCAAGAT ACGCTAAGCCATTCCTGGAACGGATCCGGAATATCTTGGTCCAAGATATT GTAACGTATCGTATTCATTTTAGCCAAGCCTCTTGACCCTGTTTATTACG CGTTAGGCTTTCGCCCCAGGTACCACCCCGCAATTTCCTCTCCCGGCCTC AATGCCTCCGCCATAATCTCGGAGGAACCGCCTGTCCTACGATCATGACC GATGGCACCTAACTTACCCCAATCTACGCTTGACCTTATCCATGATATGA TCGTCGATGGAAAGCTCTCTTTGTCCCAGATGGCTGCAAATGCCGGCTGC AGCAAGCCTACAATCATTGCTATTCGCTCTAATCTTCGCATGTTCGGCAG TGTCAGAGCACCACCGGTCAAAAGTGGACGTCCACGTCGTCTTACAACGG CGATGATGGACGCTCTTTGTGACCACTTACTGGAAAAGCCTGGTCTATAT CTTCCCGAAATGCAGGTTTTTTTGCTAGACGAATTCAGTCTGCATGTCTC AACTTCTACTATTAGCAATGCGCTTCATCGCAAAGGATGGTCGAAAAAGA TAGCGCGACAAAAAGCAAAAGAGCGAAATGCCGATTTACGTGATGAATAT TTCCACGATATTGCGGAATTCCGATCGTATCAGCTTATATTCGTTGACGA ATCCGGATGTGATAAACGGATAGGCTTTCGGAGAACAGGCTGGTCGCCCC TGGGTATAACCCCAGTCCAGGTATCAAAATTCCATCGCGATCAGCGATAC CAGATACTTCCAGCGTACACCCAAGATGGTATTCTTCTTTCTCGTGTGTT CCAGGGCTCCACTGATGGCTTGTGGTTTGAGGATTTTATTGAGGAACTTC TTCAGCATTGCCAACCATACCCGGCCGCTAAGTCAATTATCGTCATGGAT AATGCCTCTATTCATCGATCTGGACGGATACAGGATATGTGTTTGAAAGT GGGCGTCAAATTGATATATTTACCACCATATTCGCCAGATTTGAATCCAA TTGAAGAGTTCTTTGCCGAGCTAAAAGGATTCATCCGACAACATTGGCAG ACATATGAAGATAATCGCGACCAGGGTTTTGCTTCCTTTCTTGAATGGTG TGTGGACAAGGTCGGTGCCAAAGAACAGAGTGCTAGAGGGCATTTCAGGC ACGCAGGTCTAACAATAGAAGAGCCATAGCATCTATCATGTAGTCTTTCC GGCAGTGTCGCTACTTCTTTCTCTGATTGTTTCCTGGGGCCCAGCCTTGA AACTACGCTAAGCTAGTTTTAGAACGGAACTGGAGAATAGCCAATCCGTG TATATGCCATATCACATTTTTGTTCATTAGCTTCCGATCTATGTATACTT CATCTTAATACTTATGAACTATGTCTAG
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Coding sequence (CDS) from alignment at ch3:661108..666485-

>KJC3_013016-T3 ID=KJC3_013016-T3|Name=KJC3_013016-T3|organism=Aspergillus niger KJC3|type=CDS|length=2415bp|location=Sequence derived from alignment at ch3:661108..666485- (Aspergillus niger KJC3)
ATGGAGGAAACAATAGCCGAATTACGACGTCAGATTGAAGAACAACAAAG
GCTGCGAGAAGCGGCAGAGCGCCGTGAGGAGGAAGAGAGACAGGCGCGAG
AAGAGGCAGAACGCCGTGAGGAGGAAGAGAGACAGGCGCGAGAAGAGGCA
GAACGCCGTGAGGAGGAAGAGAGAGAGGCGCGAGAAAACGAGAGGCAAGC
ACGAGAAGCGGCAGAACGCCGTGAGGAGGAAGAGAGACAGGCGCGAGAAG
ACGCTGAACGTCGAGTGCAACCCAACTCCCTGTTTCGCCTCCTCGATCGC
TGCCACAATTCTCTCTCCCAAGCGATCCGAGTTGAGGCAGATGCCACCCT
TACTACTCAGGGCGACGCGGCCGATCCTGTGAATCGACTCTACCCCAAGC
ACATCATCCCTTGGCGTAACTTCCCCCAACTACAGGAACAGATCTGGGAC
AAATTCGACCGTAATAATGCCTTTACCACGCGCCCACTATTCCCCTCTGA
TACCCAAATCGATTATGTCGTCATGAATATCCAGAACAGACCAATCTATT
CGGAAGCCTCTCTTCGGAATTTCGAGCGGGACACGGTGGACAACTTTGTT
GAAAAGGTCATTGAGGTTTTGCGAGACGATGAACCCCTTCGAGATGAGTT
TGGAATCCAAGGCCGAGTCAGCTTCTATGATCGCGCAAACCCATTAGAAA
CTTCGCTCGAGAACAGCCTAGATCAAATGAATCTCGAGGACGCGCAGACA
CCCCAACGACCGGCGAACACGAGGCGTGGAAGAAGCCGGGGACGAGGGAG
AGGAGCCGTGCGGAGACAGATGAGGGATGGCACTGCGCGACGACGCAATC
GGCGCGCCGACCAGTTCTGCGTGCACCTTGTGGCGGATGAACGGAAAATG
CCGGTGTATGCAGTGGAGTTCAAAGCGCCGCACAAAGTGACGATCCCCGA
ACTGGTGGCGGGTCTACACCCGATAGATCTGGATCGCGAGGTCATTGACC
AAGAGGGCGACACGTTTGAGTTTTATGCCACCCGCCTGGTCGCGGCCGTG
GTCATTCAGATATTCTCATACATGATCGACAGTGGCGTTCGATACGGCTA
CATCTGCACCGGGGAGGCTTTCGTGTTCCTTCATATCCCAAAGGATGATC
CCACCATTATTCAATATTTCTTGTGTATCCCGAATCAGGATGCGCAGGCG
GATGTGCAGGCGGACGATGAAGTGCGCCTCCACCGGACTGCCATCGGTCA
GGTGCTTGCGTTCACGCTTCAAGCGCTGGCCGTCGAACCTCCGACTCAAC
AATGGCACGATGTGGCACACGACCAGCTAACAAGCTGGAAGGTCGAATAT
CTCGACGTGTTGAGACAAATTCCCGAAACTCTCCGTAAAGACCCGCCGGC
GTCTAATTATCGGCCCTCTCACTGGAAACCAGTTCGGAAAATACACTACA
CACGCGCTCGCGCTCGCGCTCGTTGTCAACCGGGCGCATCGACACCGAAG
CACTCGTCCACTGAAGGCAGCGGCAGTGATCAAGAATCGCATTCGCCATC
CGCCGCAGCCGCGTCCCGCATCCGATCAAGCCAGGGCCAAGGCAACCACC
GCCAATCCACCCGGGGAGGTGAAAGGACACGAGCCGGCCGAGACCATAAA
CAGACCTCTCGGCAAGACAGACATTTTACGCGACCATACTGCACCATGGC
CTGCATCCGCGGCTTGGCTAACCGAGAACCACTGGATCAGAATTGCCCCA
ACTGGGAACTCCACGGTGGTCCAAGACACTCCATCGGACCGCAGGAGTTC
ACACGTCAGCTCCATCGTCAACTGGCCCGAGATCGGGAGCTTGGATTCGA
ACAGCTACACGTGTGTGGTCGGACGGGATATCTCATTAAAGCCACCCTCC
TTTCCTGCGGATACACGGTGATCCTGAAAGCAACGACTGTGGAGAAGCAG
CATCGCCTTCAAACGGAAGTGGACAATTATCACCGGCTCCGGAACTTGCA
GGGACAATACATCCCTGTCTGTCTTGGGGACTTTCAGCCTCGCGTTGCAT
ATTGGTACCACGGCAGGTTAATGGCGCAGATGATGATCTTGAGCTGGTCT
GGAACGCGGCTTCAGCATACCATCCATGATGGCAATTCCCACTTCTTTCA
CCAAGAGCGCGACAAAGCTCTGACCGTGCTCCGGTCGCGTGGAGTTATCC
ACTGCGACAGTGAGTGGCGCAATATGCTGTGGGATGACCTGAGTGGCCGC
TTGGTTGTCATTGACCTAGAGGATGTGCAATGGTTGAAGCGCGCTAGGGC
CCTTGAATCCGTCTCTGCGAATACGCGGCGAACTCGTTGCGTCAGAGCGA
TGAAATATAAACCCGGCTTGGAAAGGGTGGACATTCCGCAACACGGCAGT
ACCTTAAGCTTGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013016KJC3_013016Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013016-T3KJC3_013016-T3-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013016-T3.cdsKJC3_013016-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013016-T3.utr3p3KJC3_013016-T3.utr3p3Aspergillus niger KJC3three_prime_UTR
KJC3_013016-T3.utr3p2KJC3_013016-T3.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_013016-T3.utr3p1KJC3_013016-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013016-T3.exon5KJC3_013016-T3.exon5Aspergillus niger KJC3exon
KJC3_013016-T3.exon4KJC3_013016-T3.exon4Aspergillus niger KJC3exon
KJC3_013016-T3.exon3KJC3_013016-T3.exon3Aspergillus niger KJC3exon
KJC3_013016-T3.exon2KJC3_013016-T3.exon2Aspergillus niger KJC3exon
KJC3_013016-T3.exon1KJC3_013016-T3.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013016-T3.utr5p3KJC3_013016-T3.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_013016-T3.utr5p2KJC3_013016-T3.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_013016-T3.utr5p1KJC3_013016-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011009
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:661108..666485 -