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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:812507..816492- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013019-T1 ID=KJC3_013019-T1|Name=KJC3_013019-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3986bp|location=Sequence derived from alignment at ch3:812507..816492- (Aspergillus niger KJC3)
CGGGGGTTTTAATTACGTCCGGTAACAGCTCTCAAAAGTAGGTAATATCA
CGACACTTGAAAGAACAGAACGCCGTGTTTTAACCATAATTTTGTGTTGG
GAGCACTATCTTAGCGAGAACGAGCGGAGCACATGGACAACGGGCGCATC
TCATTGCGTGGTCAAGCGACAACCTACGTTATATCCTGCCTTGAACGATG
ACCCCGCAACCAAACGTTCACGTGGTATTAAACCAGCTGCCACTTCGAGT
CTTGGTTGCACAGGATCTATAAAAATGACTGTCAGGTCCTTGCAGTCTTA
TTGTCCTCACATTCATCCCAGCCAACATGGCCACCATTAACTCCCTCGAA
CGGGCGCTCAAACAGCGAACCTCGCCAACGGCGTCGTCCTCGGGGCAGCC
GTTGTCCGATATTCAATATAGTGCTGGATTCGAGATATTGGAGGGCTGCT
CAGCGTATGAAGACTTCATTATTCCGCAATTATGTCGGCTCATAGCCTCT
CTTTTCCATTCGCATATGAAGATCTCAGTGCTAGAGATTGGACCTGGCCC
GAAGAGCATACTTGGAAAGCTGCCCCATCATCTTCGACAAAAGATTGCCA
AGTACGCTGCATTCGAGCCCAACCACATATTTGCTACGCGACTGGAAAAA
TGGCTTTGCGCTGCTCCGGCAACAGAACCCCCACTGCTCTCTCTGGAAGG
CCCGCCCAACATCCAATGCACTCCATTCGACATAAACAGCGACACGGAGA
ATTTTGCCTCTGTTGGTACCAGCAACGACAATGAAAAATACAACCTCGTT
CTGTTCTGCCAAAGCATGTATGCCATGAAACCCAAAGCGAAGTTCATCGA
ACGGGCGCTGGACATGCTGGTTGAGCGACCCGAAGATGGACTGGTGGTCG
TTTTCCATCGTGACCGGGCCCTGCAATTTGATGAATTAGTTTGTCACAAA
ACGGATTCTTTTCATGACGGAGTCGTTCGCGTGCCTGATAAAGACGACGT
ACTGGACAGTTTTGCGGCTTTCGTCGCAGGATTTATCATGCAGGATATGG
AGGCGGATAAAGCTATTCGAGCCGAGTGGCGTGAGGTGTGCCGGGCCTTG
GGGCATCGTGAGGATGCTGATCCCGATCATCTGTTGTTTAACTCGCCTGA
GATTATGATGGCCTTTACCCGACATGCGACCGCGTTACCGGAGCTCATAG
CTCAGGTGCCGTTGGTGAGGGAGAAAAGGATAGTCAAGAACCATGAAGCT
CACCTCTACGGTTGCGCTGCAACCGTACGGCCAACAAAAATTCAACACGT
TCAGCAGTGCATTCAATGGGCCCTAAAGCATGGAGTGGGCCTGACAGTCA
TTGGCGGAGGTCACAGCGGCCACTGTCTGTGGCCCAGTGTCGTCTCCGTC
GACATGGCTGCCTTTGACCAGGTCCACTTGCTCACAGGAGAAGAGAAAGG
AGAGGCGGAATCTGATTCCAATCCCTTGGTCGTCGCCGAGGCCGGCTGCA
AGATCACTGATATCACTCACAAGTCAATGGAAGCCGGCGTGACAGTGCCC
CTAGGGTCCCGCCCAAGCGTAGGCGCAGGACTGTGGTTACAAGGCGGCCT
CGGGCACCTGGCTAGACTATATGGCCTCGCGTGCGACCACATCATCGGGG
CCGTGCTAGTCAGCGTGAAATCTGGCGAGGTCTTCTGTATAGGCCGTGTA
CCCAGCCAGCATTGGCCGGACGGTGCCGTACGCCCAAATAACGAGATTGA
TCTTTTATGGGCAATCAAAGGGGCAGGAACCAATTTTGGCATCATAATCA
GCGTCACCTTCAGGACTCATGTGGCACCTACCTACACAATCCGAAACTGG
GTTCTTCCGCTGAGTGATGATTCTGAGGAGCAGCGCAAGATTTAAGACTT
TGACAACTTCGACGCTGGCAAGCTCAGCCGGAATTGTTCAGCAGATGCGT
ATCTCTACTGGGAATCTGGCCAGCTGCATCTTGGCGTCACCTTGTTCGAA
TCCTCCATGACGGTGAAGCTCTCGGATAAGCCACCATTGTCTACTTCCTC
ATCTATAGACACAATTTTGGGGCCAGGAGATGATTGCCGGTCCGTGGATG
GCATGAGTCTGTTTGACGCCGAGATGTACATGTCCAGGATGCACGGGGGT
CATGGCGGGAACAAGACGTCCGCTTTCAAGCGGTGCCTATTCTTGAAAGA
CATCGGAGCTGTGGACATCACAGATCGCTTACTAGCAGCTATTCGCAATC
GTCCCACACCTTTGTGTTATCTTCATCTACTGCAAGGTGGAGGAGCGATC
ACCGACGTGGGGGCCGATGCCACTGTTTTCAGTTGTCGAGACTGGGATTT
CGCCTGCGTGATAACTGGCGTCTGGCCCCGCAACCGAGATGGAACCGAAG
TTTCTGAAGCGGCCAAACGATGGGTATATGACGTTGCCCAAGACTTGTTG
CCGTTCAGTAGCGGAGCATATGGCGCTGAGCTCGGGCCCGATCCAAGAGA
TGCTACACTAGCGGCCAAGGCTTTTGGCCCAAACCGGCCGCGCCTGGCCC
AGCTCAAGCAAAGCTCGGATCCGCACAACGTGCTGGCATACGCCTGCCCA
CTCCCGAGAGCACCAGGGGAACAAACACTTATCGTTCTTGTCACTGGCGA
GAGCTGCGCTGGTAAGGACTATTGTGCCAATGTCTGGGTTGCTGCGCTTA
ATGAGAAAGGCCTGAGGGCGCGCGCAGTCAGCATAAGCGATGCCACCAAG
CAGGAATATGCAGCGGCCTCCGGGGCCGATTTCGAGCGCCTGCTTTATGA
CCGTGGCTACAAGGAACAGCATCGTCCAGCATTGACAGCGTTCTTCCATA
GCCAGGTACACCGTATGCCTCGGCTTCCAGATGAGCATTTCCTGAATGTG
GTGCGCGGAGCCGTAGGTTTAGACGTGCTACTATTGACTGGAATGAGAGA
CAAAGCGCCGGTCGCGGCTTTGTCGTATCTAGTACCAGACAACAGAGTGA
TTGAAGTTCACGTCAAAGCTAGTGACAAAATACGGCGAGTTCGCGGAGGG
TGTTATAGCGATGAACGCCCCGCTGATGGCAGCAAGATTAACAGAGAAAA
CGAACCGAGCACTATCTCGACGCTCTCGACGGCCTTGGACTACAGACCCA
CCCTTCTCTTTGACAATGACACGGCCGGGGATGAGACGGTCAAGAGGTTT
GCTGAAGACTACCTGCTCCCCTTCTTTCATGAGGACTTGCGGCGATTGTC
CAACATGGTACGCCTGGTACCTGGTTTCCCACGCGCGGGCATCGACTTCC
GTCACGTGCTCAACATCGCTCAGCAACCAGGGGGGCTGGCCCTGTGTACC
TCCCTGCTACAATATCACTTCACAGGTGACTGGGCCAAAGTGGATATGAT
AGCGTGTTGCGAGGCCGGCAGCTTAGTCTTCGCCCCTTTGTTAGCCTCAC
AGGTCAATGTGCCCTTGGCGCTCATTCGCGAAGCCGGCAAGCTTCCCCCG
CCCACCATTTCCGTCTCCAGGTCTGCATCGCATATATCATCTTTAACTTT
GAATGCACCGACAACGAAGCGAATTGAGATAGGCCGGGATGTGATTCCTC
AAGGCGCTTCGGTGGTAGTGGTGGACGATACTCTTGCTACCGGAGAAACC
CTTGTTGCGGTGTTACAATTATTAGGAAGAGCTGGAATTCCTGCTACGAA
CATCAGTATCTTGGTAATTGCCGAGTTCCCTGTTCACCGTGGCCGCGACT
TCCTGCTCCAGAATGGGTTTGGGGGAGTCAATATCCAGAGCCTTTTGGTC
TACGGTACTGCCTAGTGTGATCTATAGGGAAGGATATGAGACTAGGATGG
TATTTGCGATATGATCCTAGCTATCTATGACATTTCTCCCTTTGCATTAC
TCTCTAGGTTGATCTACATTCTATCTACATCTTTCGGTACTACCAGTTGC
TTTGTAATGCTCACCAGAGTAAATAATGTTATCCTT back to topCoding sequence (CDS) from alignment at ch3:812507..816492- >KJC3_013019-T1 ID=KJC3_013019-T1|Name=KJC3_013019-T1|organism=Aspergillus niger KJC3|type=CDS|length=3498bp|location=Sequence derived from alignment at ch3:812507..816492- (Aspergillus niger KJC3)
AGAAAACGAACCGAGCACTATCTCGACGCTCTCGACGGCCTTGGACTACA
GACCCACCCTTCTCTTTGACAATGACACGGCCGGGGATGAGACGGTCAAG
AGGTTTGCTGAAGACTACCTGCTCCCCTTCTTTCATGAGGACTTGCGGCG
ATTGTCCAACATGGTACGCCTGGTACCTGGTTTCCCACGCGCGGGCATCG
ACTTCCGTCACGTGCTCAACATCGCTCAGCAACCAGGGGGGCTGGCCCTG
TGTACCTCCCTGCTACAATATCACTTCACAGGTGACTGGGCCAAAGTGGA
TATGATAGCGTGTTGCGAGGCCGGCAGCTTAGTCTTCGCCCCTTTGTTAG
CCTCACAGGTCAATGTGCCCTTGGCGCTCATTCGCGAAGCCGGCAAGCTT
CCCCCGCCCACCATTTCCGTCTCCAGGTCTGCATCGCATATATCATCTTT
AACTTTGAATGCACCGACAACGAAGCGAATTGAGATAGGCCGGGATGTGA
TTCCTCAAGGCGCTTCGGTGGTAGTGGTGGACGATACTCTTGCTACCGGA
GAAACCCTTGTTGCGGTGTTACAATTATTAGGAAGAGCTGGAATTCCTGC
TACGAACATCAGTATCTTGGTAATTGCCGAGTTCCCTGTTCACCGTGGCC
GCGACTTCCTGCTCCAGAATGGGTTTGGGGGAGTCAATATCCAGAGCCTT
TTGGTCTACGGTACTGCCTAGATGACGGTGAAGCTCTCGGATAAGCCACC
ATTGTCTACTTCCTCATCTATAGACACAATTTTGGGGCCAGGAGATGATT
GCCGGTCCGTGGATGGCATGAGTCTGTTTGACGCCGAGATGTACATGTCC
AGGATGCACGGGGGTCATGGCGGGAACAAGACGTCCGCTTTCAAGCGGTG
CCTATTCTTGAAAGACATCGGAGCTGTGGACATCACAGATCGCTTACTAG
CAGCTATTCGCAATCGTCCCACACCTTTGTGTTATCTTCATCTACTGCAA
GGTGGAGGAGCGATCACCGACGTGGGGGCCGATGCCACTGTTTTCAGTTG
TCGAGACTGGGATTTCGCCTGCGTGATAACTGGCGTCTGGCCCCGCAACC
GAGATGGAACCGAAGTTTCTGAAGCGGCCAAACGATGGGTATATGACGTT
GCCCAAGACTTGTTGCCGTTCAGTAGCGGAGCATATGGCGCTGAGCTCGG
GCCCGATCCAAGAGATGCTACACTAGCGGCCAAGGCTTTTGGCCCAAACC
GGCCGCGCCTGGCCCAGCTCAAGCAAAGCTCGGATCCGCACAACGTGCTG
GCATACGCCTGCCCACTCCCGAGAGCACCAGGGGAACAAACACTTATCGT
TCTTGTCACTGGCGAGAGCTGCGCTGGTAAGGACTATTGTGCCAATGTCT
GGGTTGCTGCGCTTAATGAGAAAGGCCTGAGGGCGCGCGCAGTCAGCATA
AGCGATGCCACCAAGCAGGAATATGCAGCGGCCTCCGGGGCCGATTTCGA
GCGCCTGCTTTATGACCGTGGCTACAAGGAACAGCATCGTCCAGCATTGA
CAGCGTTCTTCCATAGCCAGGTACACCGTATGCCTCGGCTTCCAGATGAG
CATTTCCTGAATGTGGTGCGCGGAGCCGTAGGTTTAGACGTGCTACTATT
GACTGGAATGAGAGACAAAGCGCCGGTCGCGGCTTTGTCGTATCTAGTAC
CAGACAACAGAGTGATTGAAGTTCACGTCAAAGCTAGTGACAAAATACGA
GAAAACGAACCGAGCACTATCTCGACGCTCTCGACGGCCTTGGACTACAG
ACCCACCCTTCTCTTTGACAATGACACGGCCGGGGATGAGACGGTCAAGA
GGTTTGCTGAAGACTACCTGCTCCCCTTCTTTCATGAGGACTTGCGGCGA
TTGTCCAACATGGTACGCCTGGTACCTGGTTTCCCACGCGCGGGCATCGA
CTTCCGTCACGTGCTCAACATCGCTCAGCAACCAGGGGGGCTGGCCCTGT
GTACCTCCCTGCTACAATATCACTTCACAGGTGACTGGGCCAAAGTGGAT
ATGATAGCGTGTTGCGAGGCCGGCAGCTTAGTCTTCGCCCCTTTGTTAGC
CTCACAGGTCAATGTGCCCTTGGCGCTCATTCGCGAAGCCGGCAAGCTTC
CCCCGCCCACCATTTCCGTCTCCAGGTCTGCATCGCATATATCATCTTTA
ACTTTGAATGCACCGACAACGAAGCGAATTGAGATAGGCCGGGATGTGAT
TCCTCAAGGCGCTTCGGTGGTAGTGGTGGACGATACTCTTGCTACCGGAG
AAACCCTTGTTGCGGTGTTACAATTATTAGGAAGAGCTGGAATTCCTGCT
ACGAACATCAGTATCTTGGTAATTGCCGAGTTCCCTGTTCACCGTGGCCG
CGACTTCCTGCTCCAGAATGGGTTTGGGGGAGTCAATATCCAGAGCCTTT
TGGTCTACGGTACTGCCTAGATGACGGTGAAGCTCTCGGATAAGCCACCA
TTGTCTACTTCCTCATCTATAGACACAATTTTGGGGCCAGGAGATGATTG
CCGGTCCGTGGATGGCATGAGTCTGTTTGACGCCGAGATGTACATGTCCA
GGATGCACGGGGGTCATGGCGGGAACAAGACGTCCGCTTTCAAGCGGTGC
CTATTCTTGAAAGACATCGGAGCTGTGGACATCACAGATCGCTTACTAGC
AGCTATTCGCAATCGTCCCACACCTTTGTGTTATCTTCATCTACTGCAAG
GTGGAGGAGCGATCACCGACGTGGGGGCCGATGCCACTGTTTTCAGTTGT
CGAGACTGGGATTTCGCCTGCGTGATAACTGGCGTCTGGCCCCGCAACCG
AGATGGAACCGAAGTTTCTGAAGCGGCCAAACGATGGGTATATGACGTTG
CCCAAGACTTGTTGCCGTTCAGTAGCGGAGCATATGGCGCTGAGCTCGGG
CCCGATCCAAGAGATGCTACACTAGCGGCCAAGGCTTTTGGCCCAAACCG
GCCGCGCCTGGCCCAGCTCAAGCAAAGCTCGGATCCGCACAACGTGCTGG
CATACGCCTGCCCACTCCCGAGAGCACCAGGGGAACAAACACTTATCGTT
CTTGTCACTGGCGAGAGCTGCGCTGGTAAGGACTATTGTGCCAATGTCTG
GGTTGCTGCGCTTAATGAGAAAGGCCTGAGGGCGCGCGCAGTCAGCATAA
GCGATGCCACCAAGCAGGAATATGCAGCGGCCTCCGGGGCCGATTTCGAG
CGCCTGCTTTATGACCGTGGCTACAAGGAACAGCATCGTCCAGCATTGAC
AGCGTTCTTCCATAGCCAGGTACACCGTATGCCTCGGCTTCCAGATGAGC
ATTTCCTGAATGTGGTGCGCGGAGCCGTAGGTTTAGACGTGCTACTATTG
ACTGGAATGAGAGACAAAGCGCCGGTCGCGGCTTTGTCGTATCTAGTACC
AGACAACAGAGTGATTGAAGTTCACGTCAAAGCTAGTGACAAAATACG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004631 | phosphomevalonate kinase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006695 | cholesterol biosynthetic process |
| GO:0009116 | nucleoside metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013019-T1.utr3p1 | KJC3_013019-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013019-T1.utr5p1 | KJC3_013019-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029057 |
| DBxref | InterPro:IPR005919 |
| DBxref | InterPro:IPR000836 |
| DBxref | PFAM:PF00156 |
| DBxref | PFAM:PF04275 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:812507..816492 - |
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