You are here

Home

KJC3_013021-T1, KJC3_013021-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013021-T1
Unique NameKJC3_013021-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:897947..899447+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013021-T1 ID=KJC3_013021-T1|Name=KJC3_013021-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1501bp|location=Sequence derived from alignment at ch3:897947..899447+ (Aspergillus niger KJC3)
GTCGTGGAGGCGTGGGGACAAGGATTCCTGGTGGGCTCCCTTATTATTAT
GATTGCCATCACCGCAGCCAACATGAAATATGGGGTGCTCCTGCACAAAC
TCATCGTGGCAGAGGTAAGTTGTGCTGCCTGGTTGCGGCGAATGGGGCAC
TATCCCCTGCTGATGTGGACGCTTAGCTCGCCCTGGCCCTCGGGCACGGA
ACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGCCAC
GGCCATCGGCCTCACGATTTCGCACACCCTCCACAACGTAATCGCATGGA
TGAAGATTCGCGGATTCTTCACCCCTTGGGGCACGCGACTGTATCTGATC
ACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAAATTTATGCCAACTT
TGCCTTTTTTAATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCG
AGCCGCTTTTCCGGTGCGGTGTTCGAGCGCAATTCTCCCCCACACCCCGC
GTTGCTGATCCAGATCTAGGGACCCTTGGTGGATCTTCACCACCTGCTTT
CTCCTGTACACCATCCAGCGGGGTTATGGGTGTTCGCTGGTGCAGCTGAT
CCGCATCAGCCCACGGTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCG
TCGTGTTTGCGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTA
GGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGGTGAGCGGCCGCCACTG
ACGAGGGGAAGATCAGCATGCTGACCCTACTGTAGTTGGCGTTTGTTTTC
AAATGCCTGAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCTGGA
TCGACTGCGCTATCACTACCACCCGGACGGTGTGCCACCCCAGGAGACCA
CGCACGCTCGCGGTCGGAGCACAAACCGGCTTGTGGACCGTGTACCCGAG
GCGTCTATCAAACGCCCCGAGCCAGTATGTCGGCCACCGGACATGGTGTA
AAGCCTGGAGTATCGTGTGCCGGCACCAACGGGCACGGCGTAACCTGATT
TACATGCTGGAGCCACTAGGTACATTCGATACGCATTGGAAGGAGGGTTC
TTTTCTCTTTCTCATGATAGATATGTTAGGGCCTCCAGCAGGCAGTTGGA
CGGCTTTCCTTTCGTAACAATGTATATAATGTGACCATGTGCAATTAGTT
TGGAGAAATACGGGAAAGCATAGTGTGTGGCTGTGTGCAAACGCGTGATC
ACGTAACTTGGCGTCGTGGCCAATTGGCCATACGTCTGTCTGGCTGTTTG
CCTGCGCCAAGTACGATACCGCCAGACCGATCGCCTGCTGAGTCAGCTAT
CCCCAGGGGAAGTCAAACTCCTTAACTACTGAGACGCTTAGTGCGATCGG
GGAAGACAAAGAAAACACTCGCAATGCACTCGTTGGCATAAAGTCAGAAT
ATAGGCTTGGAAATATAAATGCCTACGACGTCGTCGCCATGGTGACCTGG
C
back to top

Coding sequence (CDS) from alignment at ch3:897947..899447+

>KJC3_013021-T1 ID=KJC3_013021-T1|Name=KJC3_013021-T1|organism=Aspergillus niger KJC3|type=CDS|length=3132bp|location=Sequence derived from alignment at ch3:897947..899447+ (Aspergillus niger KJC3)
ATGATTGCCATCACCGCAGCCAACATGAAATATGGGGTGCTCCTGCACAA
ACTCATCGTGGCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCT
TTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGCCACGGCCATCGGC
CTCACGATTTCGCACACCCTCCACAACGTAATCGCATGGATGAAGATTCG
CGGATTCTTCACCCCTTGGGGCACGCGACTGTATCTGATCACCCTGCTGG
CGGCCCAGCCGTACTGGGTCGTCGAAATTTATGCCAACTTTGCCTTTTTT
AATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCGAGCCGCTTTT
CCGGGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACACCATCC
AGCGGGGTTATGGGTGTTCGCTGGTGCAGCTGATCCGCATCAGCCCACGG
TTCGGCGTCATGCTCTTGTTCATGGTGATCTCCGTCGTGTTTGCGGTGGT
GGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGA
TGGAGCCGTTCTGGAAGTTGGCGTTTGTTTTCAAATGCCTGAGCGACACC
ATCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCACTA
CCACCCGGACGGTGTGCCACCCCAGGAGACCACGCACGCTCGCGGTCGGA
GCACAAACCGGCTTGTGGACCGTGTACCCGAGGCGTCTATCAAACGCCCC
GAGCCAGTATGTCGGCCACCGGACATGGTGTAAATGATTGCCATCACCGC
AGCCAACATGAAATATGGGGTGCTCCTGCACAAACTCATCGTGGCAGAGC
TCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCC
CAGGGCTGGTATCTTTCGGCCACGGCCATCGGCCTCACGATTTCGCACAC
CCTCCACAACGTAATCGCATGGATGAAGATTCGCGGATTCTTCACCCCTT
GGGGCACGCGACTGTATCTGATCACCCTGCTGGCGGCCCAGCCGTACTGG
GTCGTCGAAATTTATGCCAACTTTGCCTTTTTTAATCGGGGCCAGGCCTT
ATACACCACCACCCGGCCACTCGAGCCGCTTTTCCGGGACCCTTGGTGGA
TCTTCACCACCTGCTTTCTCCTGTACACCATCCAGCGGGGTTATGGGTGT
TCGCTGGTGCAGCTGATCCGCATCAGCCCACGGTTCGGCGTCATGCTCTT
GTTCATGGTGATCTCCGTCGTGTTTGCGGTGGTGGACATGTGTGCGATCC
GGGTCGAGAATCGCCTAGGCTACCCCCCGGGGATGGAGCCGTTCTGGAAG
TTGGCGTTTGTTTTCAAATGCCTGAGCGACACCATCATCTTGGATGACTT
CCGGAGCGCCCTGGATCGACTGCGCTATCACTACCACCCGGACGGTGTGC
CACCCCAGGAGACCACGCACGCTCGCGGTCGGAGCACAAACCGGCTTGTG
GACCGTGTACCCGAGGCGTCTATCAAACGCCCCGAGCCAGTATGTCGGCC
ACCGGACATGGTGTAAATGATTGCCATCACCGCAGCCAACATGAAATATG
GGGTGCTCCTGCACAAACTCATCGTGGCAGAGCTCGCCCTGGCCCTCGGG
CACGGAACGTTCATCTTTCTCCATGCGCCTGCCCAGGGCTGGTATCTTTC
GGCCACGGCCATCGGCCTCACGATTTCGCACACCCTCCACAACGTAATCG
CATGGATGAAGATTCGCGGATTCTTCACCCCTTGGGGCACGCGACTGTAT
CTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAAATTTATGC
CAACTTTGCCTTTTTTAATCGGGGCCAGGCCTTATACACCACCACCCGGC
CACTCGAGCCGCTTTTCCGGGACCCTTGGTGGATCTTCACCACCTGCTTT
CTCCTGTACACCATCCAGCGGGGTTATGGGTGTTCGCTGGTGCAGCTGAT
CCGCATCAGCCCACGGTTCGGCGTCATGCTCTTGTTCATGGTGATCTCCG
TCGTGTTTGCGGTGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTA
GGCTACCCCCCGGGGATGGAGCCGTTCTGGAAGTTGGCGTTTGTTTTCAA
ATGCCTGAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCTGGATC
GACTGCGCTATCACTACCACCCGGACGGTGTGCCACCCCAGGAGACCACG
CACGCTCGCGGTCGGAGCACAAACCGGCTTGTGGACCGTGTACCCGAGGC
GTCTATCAAACGCCCCGAGCCAGTATGTCGGCCACCGGACATGGTGTAAA
TGATTGCCATCACCGCAGCCAACATGAAATATGGGGTGCTCCTGCACAAA
CTCATCGTGGCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTT
TCTCCATGCGCCTGCCCAGGGCTGGTATCTTTCGGCCACGGCCATCGGCC
TCACGATTTCGCACACCCTCCACAACGTAATCGCATGGATGAAGATTCGC
GGATTCTTCACCCCTTGGGGCACGCGACTGTATCTGATCACCCTGCTGGC
GGCCCAGCCGTACTGGGTCGTCGAAATTTATGCCAACTTTGCCTTTTTTA
ATCGGGGCCAGGCCTTATACACCACCACCCGGCCACTCGAGCCGCTTTTC
CGGGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACACCATCCA
GCGGGGTTATGGGTGTTCGCTGGTGCAGCTGATCCGCATCAGCCCACGGT
TCGGCGTCATGCTCTTGTTCATGGTGATCTCCGTCGTGTTTGCGGTGGTG
GACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGCTACCCCCCGGGGAT
GGAGCCGTTCTGGAAGTTGGCGTTTGTTTTCAAATGCCTGAGCGACACCA
TCATCTTGGATGACTTCCGGAGCGCCCTGGATCGACTGCGCTATCACTAC
CACCCGGACGGTGTGCCACCCCAGGAGACCACGCACGCTCGCGGTCGGAG
CACAAACCGGCTTGTGGACCGTGTACCCGAGGCGTCTATCAAACGCCCCG
AGCCAGTATGTCGGCCACCGGACATGGTGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013021KJC3_013021Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013021-T1KJC3_013021-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013021-T1.utr5p1KJC3_013021-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013021-T1.exon1KJC3_013021-T1.exon1Aspergillus niger KJC3exon
KJC3_013021-T1.exon2KJC3_013021-T1.exon2Aspergillus niger KJC3exon
KJC3_013021-T1.exon3KJC3_013021-T1.exon3Aspergillus niger KJC3exon
KJC3_013021-T1.exon4KJC3_013021-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013021-T1.cdsKJC3_013021-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013021-T1.utr3p1KJC3_013021-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:897947..899447 +
Powered by Drupal