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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:961290..962616+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013024-T1 ID=KJC3_013024-T1|Name=KJC3_013024-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1327bp|location=Sequence derived from alignment at ch3:961290..962616+ (Aspergillus niger KJC3)
AGGCCTCCGACATACGCCCGGCGCATATACGACGAGAAGTACGTGCTAAC
AGATATGCAGGTGGCCTGGCGTGTTCGGACAGTTCTTCTGGTCGTGGATT
GGGGGCCCCGTCGTTCTCTGGAAATCCCGTCACATCCACGACACCCACGG
CTGGCGAGTCCAGACAATGGGCTGCGTCATCGCCAAGTGAGTCAATCGGT
CTGATGAGGTCTGTCGTACGACTAACCCGTCCTGTAGTCTCCCGGCGACG
CCGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCGAGTCAATCA
GTACTGGCTACCGCCTCAGTGGTAGGTGCCCCGAGCCGTGACCAACAGGA
ACATAGAAATAAGGATGGAAAGAAGCACGAAAATGTGGCTGACACCTGTA
GGATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCG
TGCCGAGAGGTAATGCGCCATCGATTCGATCGCACGGTGGGAGCCAAATA
CCAATCCCTTTGCCGGTAGCACCATGGCCCGCAGGTCCGCCTCCATTCTT
GTCGAGTTCACAGGGTCTGGCCGGGAATCATGGAGTAGATCTCTTGGCTC
CAGCTCCAGCTCTCGGGACAGCATATTCACTAAGCGTGCGCTTGAATGCG
TCTTGGCGCGCAATCCCGCCCCGCTGCAGGATTTTTCCGCCCATCGCGAC
TTTTCCGGAGAGAATATAGCTTTTCTGACCCGAGTGGCAGAATGGAAGAG
CTCGCTGCCCCATGCGGTCTGGGATAGCAGGATCTCAGACTATGGAGACC
TTACCGACGTGATCCGGGAACATTTTCACCGCGCGCTGTGTATTTACAAG
ACGTTCATCAGTGATCGCGCGCAGTTTCCAATCAACATCTCTTCGCAGGA
ACGGAAGGAGCTGGAAAACGTCTTTGAGGGCCCTGCTGGGCTTCTCTTTG
GAGACGGGCGCCCGGCCAATCCCGCCGTTCCGTTCGATTCGCCAGGCTAT
GGTCCCACGCCCTCGGCGTCTCCGATCGCCTCCATCAAGGCCGAGTCCGG
TTCGCGATTCGCCGACAATGGCCAGGTGCAATACTGGGGCGAGATTCCCC
AGAAATTCAATACGACGGTCTTTGACCGAGCCGAGGAGAGCATCAAGGAT
CTCGTCCTCACCAACACGTGGCCTAAGTTTATTCGAAGTTGCGGCATCGC
AGCTGAGGTTGCTTTGCTGGCGGAAAGCTAGAGTCCTGCATGCAGGTTTC
GGAACGAGGTTGCCAGCGATGGAACATAGGTTTGCATGGCATCAGTCTGG
GATGTTGATAGAATATCATAGATAAAT back to topCoding sequence (CDS) from alignment at ch3:961290..962616+ >KJC3_013024-T1 ID=KJC3_013024-T1|Name=KJC3_013024-T1|organism=Aspergillus niger KJC3|type=CDS|length=708bp|location=Sequence derived from alignment at ch3:961290..962616+ (Aspergillus niger KJC3)
ATGGCCCGCAGGTCCGCCTCCATTCTTGTCGAGTTCACAGGGTCTGGCCG
GGAATCATGGAGTAGATCTCTTGGCTCCAGCTCCAGCTCTCGGGACAGCA
TATTCACTAAGCGTGCGCTTGAATGCGTCTTGGCGCGCAATCCCGCCCCG
CTGCAGGATTTTTCCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTT
TCTGACCCGAGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGG
ATAGCAGGATCTCAGACTATGGAGACCTTACCGACGTGATCCGGGAACAT
TTTCACCGCGCGCTGTGTATTTACAAGACGTTCATCAGTGATCGCGCGCA
GTTTCCAATCAACATCTCTTCGCAGGAACGGAAGGAGCTGGAAAACGTCT
TTGAGGGCCCTGCTGGGCTTCTCTTTGGAGACGGGCGCCCGGCCAATCCC
GCCGTTCCGTTCGATTCGCCAGGCTATGGTCCCACGCCCTCGGCGTCTCC
GATCGCCTCCATCAAGGCCGAGTCCGGTTCGCGATTCGCCGACAATGGCC
AGGTGCAATACTGGGGCGAGATTCCCCAGAAATTCAATACGACGGTCTTT
GACCGAGCCGAGGAGAGCATCAAGGATCTCGTCCTCACCAACACGTGGCC
TAAGTTTATTCGAAGTTGCGGCATCGCAGCTGAGGTTGCTTTGCTGGCGG
AAAGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013024-T1.utr5p1 | KJC3_013024-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013024-T1.utr3p1 | KJC3_013024-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036305 |
| DBxref | InterPro:IPR016137 |
| DBxref | PFAM:PF00615 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:961290..962616 + |
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