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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:1079870..1082903+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013029-T1 ID=KJC3_013029-T1|Name=KJC3_013029-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3034bp|location=Sequence derived from alignment at ch3:1079870..1082903+ (Aspergillus niger KJC3) CTTTTTGAATAAACCCCATCAAGCAAATGGAAAACAGCAGCCCACCCGAC
TACCAAGCGCTCTATTTGAGGGCAGAGGAGGAACGCCAGCGGGAAGCAGA
GCTTAGGAAACAAGCAGAGGAACGCGGACGGCAAGCAGAGGAGGAACGTC
AGCGGGAAGCAGAGCTTAGGAACCAAGCTGAGGAGGAACGCCAGCGGGAA
GCAGAGCTTAGGAAACAAGCTGAGGAACGCGGACGGCAAGCAGAGCAGGA
AAGGGACCAGGAAAAGGAGCAAACACGACGAACCACCTTTGCAGAGCTAA
TTCGATACTGCCACAACTATACTTCTCTATGCCTGAGAGTCGAAAGTCCG
TCCCGTTCTACGACGGGAACGGTTCCGGCGCCTAAGGGGAAGCGCTGTCC
GCTGCAACTTCTGCCTTGGACCGAGTGCACAGCCATACAGCAAGAGATCT
ATCACTCTGTTTGTACTTATTTAGCACCGCCTGGACAACCTGCTGCACAA
GTGTTTCCGTCGCGTACTGTCCTAAAGGGGTTTGGGGAAGAGTTCAAGAA
GAGAGCTATAAGCAGTGAGCAGGATCTGCAAAGCTATGAGAGATTCGGGG
TGGAGAACCATGTCCGTGATATTATCGCGGAACTCTGCAGGATACGTGCT
GCTCGAGAGAAATTTCAGTTGGGCAGTGGAATTCAGTTCGATAACCACGC
AAATGCCCTCGATGCGGTTGACGCCGACCAGTCTAAAACGGATAAATCAG
CGAATTCCCGACCGGATCAATATTGCATCCACCGTGTCGACGGTGATAAG
AATACAACTATTATGACAGTTGAGTACAAGCCGCCCCATAAACTATCCGT
GGAGAATCTTCGAGCGGGTTTGCGACCGATGCAGTTCTGGGATGAAGTGG
TCAGACCGGACTCCGTTCCCACGGAGGGGCCCGAGAAACTGAGATATAAT
GCGGCCTGGCTAACCGGTTCGGCTGTGGTTCAGGAGTATCATGTCATGCT
CCAGGAAGGGCTCGAGTACTCGTATCTGACTAATGGATTCGCATTAGTTT
TGCTGCGGGTCCCCTATGATAATCCAGGCACCTTATACTATCATCTCTGT
GAACCCAACATGGAGGTCAACCCGGATGATGAACCGGGTTCTTTACAACA
GCCGCTAACAGCTGTTGCTCGGGTCTTGTGTTTATGCCTCATGAGTTTCC
GCTCACAATATCGTGACCAGGAGTGGCGGAATGCCACAAAGAAGCTGCCA
AAATGGAAGACAAGCTTCGATCACACACGTTCCCAGATCCCGGAATCGGA
ATTGCAACAAAACCCGCCCGATTCGGAATATGCAGCATCGGAGTATACGA
GCTCCGAACCTACTACATCAGAATATATACCGTCTTCGTCTCCTGCTCCA
CCCCCTGCCGACACCCGTCGAATACCCACCCGGTCTCGAGCTAGCTGCGC
GTCGCCGAATCTGACACCACGTCATGATTCTGACTCGGACGCAGATCAAG
CTCCAGGAGGAAGGAAGCGTGGCTTCAGTCAGATTGCATCCTCTCCTTCG
TCTCCATCTGCTCAACGATCAGCACATCTGGCGGGAGATCAATATAGCCC
GATCGGCAGCCAAGGTCAGCAGCACACCGCACAGTTTTGCACCCAGAAAT
GTCTACGTAGCCTGCAACGAGGTGGTCAGCTGGATGTTAATTGCCCAAAT
GTCATGCTCCACCGACAGGGGGGGGACAGCAGCCAACACCCCATCAATGC
CAAAACGCTGATCAAGCAACTCAAACAGCAACTAGATGAAAATATCGACC
GAGACTGTACACCAATGGGGGATTGTGGCGCATCGGGAGTCCCATTCAAA
GTCACCTGTACGGCATATGGATATACTATGGTCGGTAAAGGCACAACTTC
CCGACGGTGGGAGGAGGTCAAACGTGAGGAAGTCGTATACCGTGTACTCG
ACCAAGCACAGGCTTCTGCTGTTCCTGTTTTTCTGGGGGCAATCGATTTG
GCCAAATCCTACTTCGTACATGGAGCTGGTGAGATCTGCCACATGCTCAT
CATGGCCTGGGGGGGTGAGCCTATACATAAGATAGAGCGTGACACTACGA
TCACACGTGAGATTGCGAGGTCTGAGAAGGAGATCTGTTCCTTGGGAGTC
TTACACCAGGACCTCCGGTCGGACAATATTTTATGGAACGCCGAGCTGGG
ACGGGCCCTGATCATTGACTTTCACTGCTCGAAACTGAATCACCGACCTA
TGAAAAGGCGGGTGAAGTCACCCGGGAGGCATCCGCGTCGAGAACTGCAC
AAGCGAAAACGACTTTGTATTGTCTAATAATGAAGGTGAGAGGAATTGCA
CGCCTGCGCGTGAATGAATAATATGGACTGGCAGTAATGTGATTAATTCG
TAAGTAAATGCAGGATCATTGTTTATACAGTAGCTGCCTTCATAAGTCGA
AGTCCTTATGAACAGTCTGCCAGATTGTCATCGGCAAAAGAAAAGCAGAG
GGCCTCTAAATCTCAGTACGTGAAAAGACACAGTTTTGGGCCGAAGGCCA
CAATATTCCGTGTCAGTTGGTGACGGCAGAGCCACAGTTCTGGGCCGAAG
GCCACAATATTCCGTGTCAGTTGGCGGCGGCGGAGCCACAGATAAGTAGT
AGTCCCATCCGCCTTGTGTTGGTTTCCCACTAGACTAAAATACGAATTCG
CACCTAGCCCAGTGGTTTATGGTTTAGAATCCAACTCCTTGGGCGAATGC
AGGTATTCACTGTATAGCGATCTCTCTCGATACATGTCTTTGCTGTAAGC
TATTTCTTTCCTGACGAATCTGGAGCCTCACCAAGGCCTGTGACTGTTTC
TCTCTTCCTCTCCACCTTGCCATAAGGGAAAGGGTTAGGTCCTATTGTAG
CAACGAATTTCATTGTTGTGGTAAATGTAGTGCCGGTGATGGGAATCGAA
CCCATCACCTTCAAATAGCAAGGTGACTAATCCCGCACCTTTTGGAAGTT
ACCTCGGAGCGCTTACCACTACGCCACCGCCACA back to topCoding sequence (CDS) from alignment at ch3:1079870..1082903+ >KJC3_013029-T1 ID=KJC3_013029-T1|Name=KJC3_013029-T1|organism=Aspergillus niger KJC3|type=CDS|length=2301bp|location=Sequence derived from alignment at ch3:1079870..1082903+ (Aspergillus niger KJC3) ATGGAAAACAGCAGCCCACCCGACTACCAAGCGCTCTATTTGAGGGCAGA GGAGGAACGCCAGCGGGAAGCAGAGCTTAGGAAACAAGCAGAGGAACGCG GACGGCAAGCAGAGGAGGAACGTCAGCGGGAAGCAGAGCTTAGGAACCAA GCTGAGGAGGAACGCCAGCGGGAAGCAGAGCTTAGGAAACAAGCTGAGGA ACGCGGACGGCAAGCAGAGCAGGAAAGGGACCAGGAAAAGGAGCAAACAC GACGAACCACCTTTGCAGAGCTAATTCGATACTGCCACAACTATACTTCT CTATGCCTGAGAGTCGAAAGTCCGTCCCGTTCTACGACGGGAACGGTTCC GGCGCCTAAGGGGAAGCGCTGTCCGCTGCAACTTCTGCCTTGGACCGAGT GCACAGCCATACAGCAAGAGATCTATCACTCTGTTTGTACTTATTTAGCA CCGCCTGGACAACCTGCTGCACAAGTGTTTCCGTCGCGTACTGTCCTAAA GGGGTTTGGGGAAGAGTTCAAGAAGAGAGCTATAAGCAGTGAGCAGGATC TGCAAAGCTATGAGAGATTCGGGGTGGAGAACCATGTCCGTGATATTATC GCGGAACTCTGCAGGATACGTGCTGCTCGAGAGAAATTTCAGTTGGGCAG TGGAATTCAGTTCGATAACCACGCAAATGCCCTCGATGCGGTTGACGCCG ACCAGTCTAAAACGGATAAATCAGCGAATTCCCGACCGGATCAATATTGC ATCCACCGTGTCGACGGTGATAAGAATACAACTATTATGACAGTTGAGTA CAAGCCGCCCCATAAACTATCCGTGGAGAATCTTCGAGCGGGTTTGCGAC CGATGCAGTTCTGGGATGAAGTGGTCAGACCGGACTCCGTTCCCACGGAG GGGCCCGAGAAACTGAGATATAATGCGGCCTGGCTAACCGGTTCGGCTGT GGTTCAGGAGTATCATGTCATGCTCCAGGAAGGGCTCGAGTACTCGTATC TGACTAATGGATTCGCATTAGTTTTGCTGCGGGTCCCCTATGATAATCCA GGCACCTTATACTATCATCTCTGTGAACCCAACATGGAGGTCAACCCGGA TGATGAACCGGGTTCTTTACAACAGCCGCTAACAGCTGTTGCTCGGGTCT TGTGTTTATGCCTCATGAGTTTCCGCTCACAATATCGTGACCAGGAGTGG CGGAATGCCACAAAGAAGCTGCCAAAATGGAAGACAAGCTTCGATCACAC ACGTTCCCAGATCCCGGAATCGGAATTGCAACAAAACCCGCCCGATTCGG AATATGCAGCATCGGAGTATACGAGCTCCGAACCTACTACATCAGAATAT ATACCGTCTTCGTCTCCTGCTCCACCCCCTGCCGACACCCGTCGAATACC CACCCGGTCTCGAGCTAGCTGCGCGTCGCCGAATCTGACACCACGTCATG ATTCTGACTCGGACGCAGATCAAGCTCCAGGAGGAAGGAAGCGTGGCTTC AGTCAGATTGCATCCTCTCCTTCGTCTCCATCTGCTCAACGATCAGCACA TCTGGCGGGAGATCAATATAGCCCGATCGGCAGCCAAGGTCAGCAGCACA CCGCACAGTTTTGCACCCAGAAATGTCTACGTAGCCTGCAACGAGGTGGT CAGCTGGATGTTAATTGCCCAAATGTCATGCTCCACCGACAGGGGGGGGA CAGCAGCCAACACCCCATCAATGCCAAAACGCTGATCAAGCAACTCAAAC AGCAACTAGATGAAAATATCGACCGAGACTGTACACCAATGGGGGATTGT GGCGCATCGGGAGTCCCATTCAAAGTCACCTGTACGGCATATGGATATAC TATGGTCGGTAAAGGCACAACTTCCCGACGGTGGGAGGAGGTCAAACGTG AGGAAGTCGTATACCGTGTACTCGACCAAGCACAGGCTTCTGCTGTTCCT GTTTTTCTGGGGGCAATCGATTTGGCCAAATCCTACTTCGTACATGGAGC TGGTGAGATCTGCCACATGCTCATCATGGCCTGGGGGGGTGAGCCTATAC ATAAGATAGAGCGTGACACTACGATCACACGTGAGATTGCGAGGTCTGAG AAGGAGATCTGTTCCTTGGGAGTCTTACACCAGGACCTCCGGTCGGACAA TATTTTATGGAACGCCGAGCTGGGACGGGCCCTGATCATTGACTTTCACT GCTCGAAACTGAATCACCGACCTATGAAAAGGCGGGTGAAGTCACCCGGG AGGCATCCGCGTCGAGAACTGCACAAGCGAAAACGACTTTGTATTGTCTA A back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_013029-T1.utr5p1 | KJC3_013029-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR011009 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:1079870..1082903 + |
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