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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2097442..2098209+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013032-T1 ID=KJC3_013032-T1|Name=KJC3_013032-T1|organism=Aspergillus niger KJC3|type=mRNA|length=768bp|location=Sequence derived from alignment at ch3:2097442..2098209+ (Aspergillus niger KJC3) CTCTTTGATTGTTTATAGGCCCCACTTGTATATATTTAGCGCCTTGGCAG
CTCTAGCGCTGTTTTGTATGTTACCAGTGCTGTATGATTCTGGAACTTTC
GATATTACGCTGTGACATAGCAGTACGATACACGCCATCGAGTCAGTCAC
ATCTCCGGCACCACTCCTATTCCTCACACCTTTCTGCGCTCTGTCTCGCA
AAGTGAGCAGCTGTTCATATGCCCCAAATGGCCCCCAATCTAGCAGCATC
ACAGCATGAGCTAATTTGCAACATGATTCTAAGCAGATCATTGACTACTG
CTCAGATGGCTGGCGTGGCTAATTGCAGTGAGCGCATCATTCGATATATT
CGTTCGAACCTGCGACTTTTCGGCAGTGTCAAAGCACCTCCGATCAAGGC
CGGCCGACCACGAACGGTAACCCCGCCAATGCTGGACGCCCTTTGCGAAC
ATCTCCTCATAAACCCCGATCTGTATCTAGACGAAATGGCGAGTATCTTA
TGGGATGAATTCGAGACTGTAGTGACAACTGTAGTGACAACCGCCAGTAT
CAGGAGGGTGCTCAAATCCGTTGGAATGAGTAAGGATGCGATAAGCGAGT
TGGCTTCAGGCAAACGGCCTGGTCCCCTGTTTGAGTACAGTCGGTCTCGA
AATTCCACTGACCTTGAAACACACAACGATTGTTTTCTCGCCCCGCCGCC
AAGACATTAGCGGGGAAGTTATAGAGAGCCACCCTCTTGCAAATGGGGGT
GGCCGGAAATTGTCCCGG back to topCoding sequence (CDS) from alignment at ch3:2097442..2098209+ >KJC3_013032-T1 ID=KJC3_013032-T1|Name=KJC3_013032-T1|organism=Aspergillus niger KJC3|type=CDS|length=492bp|location=Sequence derived from alignment at ch3:2097442..2098209+ (Aspergillus niger KJC3) ATGCCCCAAATGGCCCCCAATCTAGCAGCATCACAGCATGAGCTAATTTG CAACATGATTCTAAGCAGATCATTGACTACTGCTCAGATGGCTGGCGTGG CTAATTGCAGTGAGCGCATCATTCGATATATTCGTTCGAACCTGCGACTT TTCGGCAGTGTCAAAGCACCTCCGATCAAGGCCGGCCGACCACGAACGGT AACCCCGCCAATGCTGGACGCCCTTTGCGAACATCTCCTCATAAACCCCG ATCTGTATCTAGACGAAATGGCGAGTATCTTATGGGATGAATTCGAGACT GTAGTGACAACTGTAGTGACAACCGCCAGTATCAGGAGGGTGCTCAAATC CGTTGGAATGAGTAAGGATGCGATAAGCGAGTTGGCTTCAGGCAAACGGC CTGGTCCCCTGTTTGAGTACAGTCGGTCTCGAAATTCCACTGACCTTGAA ACACACAACGATTGTTTTCTCGCCCCGCCGCCAAGACATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_013032-T1.utr5p1 | KJC3_013032-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_013032-T1.utr3p1 | KJC3_013032-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR009057 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch3 | supercontig | ch3:2097442..2098209 + |
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