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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2103882..2105940+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013033-T1 ID=KJC3_013033-T1|Name=KJC3_013033-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2059bp|location=Sequence derived from alignment at ch3:2103882..2105940+ (Aspergillus niger KJC3)
ATCGAATATTGCTCGAATACTCAGCTCGCGCTAAGATCTTGGCAGTGGGG
CTAGGAAACAATAGTCATGTGTTTGAAGGTCAGAGGAATTTCGAGACCGC
CTGTAACACCGGTACAAATCACTCGGTTTCATCGCGGACAGCGATATCAA
ACCCCTGCCAGCGTATGCCCATGATGGTGTTATACTTACCCGTGTGTTCC
AGGGATCTACTGATGCTTCCATATTCGAAGATTTTGTGGAGCAGCTGCTT
CATCATTGCGGGCGGTGGCCGGAGCCCAGATCTGTGCTGGTATTGGACGA
TGCATCGTTTCACCATACCAAGCGCGTTGGACAGATGTGCAGCGACGCCG
AGGTGAAGTTGCTGTGCCTACCTCCATACTCACCAGACCTCAATCCCATC
GAGGAGATGTTTGCAGAGTTAAGGGCCTTCATTAAGCGTAACTGGAAGGT
ACATGAAGAGGACCCCGAGCTCAACTTCGATACATATCTAGACTGGTGCA
TTGATATTGTCGGTGCCAGAAAGCAGAGTGCAGAGGGGCATTTTGATCAT
GCTGGGATAACTCTGGAACCACCGCCTCTGAGCTACGACGGGATCCACCA
GTGATCCAGCACCCCACTTCTGTGTCGACCAGAACATCGATGACTAATCG
GGACAACCTCACGTGTCAATAAGTCAGAGGCATTATTTCAGATAATATGT
AGTAACTACGCCCTCAAGAAACCTCTCCGAACTCAATTGTAGCTTGGAAT
CGGCTTAGAATTTGAGCTTATCTGGATAAAGCAAACGATCTTCCTCGGTT
CGTCTATAGAACTTTACGGAACTCATGTTGAGAACTGGCTTTATTGCTTA
AAATCACTGTTAATACAGATCACTTCCTTTTTTTGCTTTTTATACGTCCT
CCGACCATGATTGGCCCTCTAACCGCGACAGCTCTCAGTTACACGTGTCA
GATGACCTTTCCAACTCTATCCCCATTTCTGTTTCTTGGAATATTGGATC
GTGCAGTTCTAATGCCTCCACCTTCGTCCGACCAAAGACTATCCGTCTTG
TCTCGGTAAAGTCTCACCACTTTTTTCATGGTTTACACAGAAAATGTCCT
TCACGCACGGCGACTACACGGTCGCATGGATTTGCGCCCTGCCGTTGGAA
CTAGCAGCAGCAAAGGCTATGCTGGACGACGTTCACCCTCCGCTTCCCCA
GCCAGAATCCGACCACAATGTCTACACACTTGGGCGAATTGGCAGCCACA
ATGTAGTAGTGGCCTGTCTGCCTGGTGGTGTCTATGGGACTATATCCGCT
ACAGGTGTAGTGTCACATATGGTCTCTACCTTTCCCACTCTCCGGTCCGG
TTTCGGATTGATGGTGGGTATTGGGGGCGGAGTCCCGAGCCCAAGAAATG
ATATTCGCCTTGGCGATGTTGTGGTCAGCCGGCCAACTACCACTTCAAGT
GGCGTTATCCAATTTGACTATGGCAAAACACTGCGCGGCGGACGATTCCA
GCACACCGGGTCGCTTAATAAACCTCCTTCAGTGTTGTTGAAGGCCGTGT
CTCAGTTAGAGAGTGGTTGTATGACCGGGGAAAGGCCGACCAGCGAAATT
TTGAATGCTACAATGCACAAAAGTGAAAAGATAAGGAAAGAGTTTTTGCG
ACCGAAGGTCGACTGGCTATTCTTACCAACCTACTACCATGGGGATAACA
AAAATGACTGTTCGGCATGTGATCAGACACAGTTAGTGGAACGCCCTGAG
CGGGAAAGTGATAACCCTTATATTCATTATGGCTTGATCGCTTCCGGAGA
TCAGGTCATGAAAGATGCCAAGTCTCGTGATTCCATTGCTCGGGATCTAG
ACATACTCTGTTTTGAAATGGAGGCTGCTGGACTCATGGACGAACTCCCA
TCACTAGCCATTCGCGGCATTTGTGACTACTGTGATTCGCATAAAAACAA
AAAGTGGCAAGGATATGCTGCGCTTGCGGCTGCTTCGTACGCTAAGGCTC
TTCTGTCGGTAGTTCCCACTTATTGCCGCAAAAAATCACGTGAAATAGAG
CAATCAGTC back to topCoding sequence (CDS) from alignment at ch3:2103882..2105940+ >KJC3_013033-T1 ID=KJC3_013033-T1|Name=KJC3_013033-T1|organism=Aspergillus niger KJC3|type=CDS|length=1782bp|location=Sequence derived from alignment at ch3:2103882..2105940+ (Aspergillus niger KJC3)
ATGTCCTTCACGCACGGCGACTACACGGTCGCATGGATTTGCGCCCTGCC
GTTGGAACTAGCAGCAGCAAAGGCTATGCTGGACGACGTTCACCCTCCGC
TTCCCCAGCCAGAATCCGACCACAATGTCTACACACTTGGGCGAATTGGC
AGCCACAATGTAGTAGTGGCCTGTCTGCCTGGTGGTGTCTATGGGACTAT
ATCCGCTACAGGTGTAGTGTCACATATGGTCTCTACCTTTCCCACTCTCC
GGTCCGGTTTCGGATTGATGGTGGGTATTGGGGGCGGAGTCCCGAGCCCA
AGAAATGATATTCGCCTTGGCGATGTTGTGGTCAGCCGGCCAACTACCAC
TTCAAGTGGCGTTATCCAATTTGACTATGGCAAAACACTGCGCGGCGGAC
GATTCCAGCACACCGGGTCGCTTAATAAACCTCCTTCAGTGTTGTTGAAG
GCCGTGTCTCAGTTAGAGAGTGGTTGTATGACCGGGGAAAGGCCGACCAG
CGAAATTTTGAATGCTACAATGCACAAAAGTGAAAAGATAAGGAAAGAGT
TTTTGCGACCGAAGGTCGACTGGCTATTCTTACCAACCTACTACCATGGG
GATAACAAAAATGACTGTTCGGCATGTGATCAGACACAGTTAGTGGAACG
CCCTGAGCGGGAAAGTGATAACCCTTATATTCATTATGGCTTGATCGCTT
CCGGAGATCAGGTCATGAAAGATGCCAAGTCTCGTGATTCCATTGCTCGG
GATCTAGACATACTCTGTTTTGAAATGGAGGCTGCTGGACTCATGGACGA
ACTCCCATCACTAGCCATTCGCGGCATTTGTGACTACTGTGATTCGCATA
AAAACAAAAATTCCCACTTATTGCCGCAAAAAATCACGTGAATGTCCTTC
ACGCACGGCGACTACACGGTCGCATGGATTTGCGCCCTGCCGTTGGAACT
AGCAGCAGCAAAGGCTATGCTGGACGACGTTCACCCTCCGCTTCCCCAGC
CAGAATCCGACCACAATGTCTACACACTTGGGCGAATTGGCAGCCACAAT
GTAGTAGTGGCCTGTCTGCCTGGTGGTGTCTATGGGACTATATCCGCTAC
AGGTGTAGTGTCACATATGGTCTCTACCTTTCCCACTCTCCGGTCCGGTT
TCGGATTGATGGTGGGTATTGGGGGCGGAGTCCCGAGCCCAAGAAATGAT
ATTCGCCTTGGCGATGTTGTGGTCAGCCGGCCAACTACCACTTCAAGTGG
CGTTATCCAATTTGACTATGGCAAAACACTGCGCGGCGGACGATTCCAGC
ACACCGGGTCGCTTAATAAACCTCCTTCAGTGTTGTTGAAGGCCGTGTCT
CAGTTAGAGAGTGGTTGTATGACCGGGGAAAGGCCGACCAGCGAAATTTT
GAATGCTACAATGCACAAAAGTGAAAAGATAAGGAAAGAGTTTTTGCGAC
CGAAGGTCGACTGGCTATTCTTACCAACCTACTACCATGGGGATAACAAA
AATGACTGTTCGGCATGTGATCAGACACAGTTAGTGGAACGCCCTGAGCG
GGAAAGTGATAACCCTTATATTCATTATGGCTTGATCGCTTCCGGAGATC
AGGTCATGAAAGATGCCAAGTCTCGTGATTCCATTGCTCGGGATCTAGAC
ATACTCTGTTTTGAAATGGAGGCTGCTGGACTCATGGACGAACTCCCATC
ACTAGCCATTCGCGGCATTTGTGACTACTGTGATTCGCATAAAAACAAAA
ATTCCCACTTATTGCCGCAAAAAATCACGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009116 | nucleoside metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013033-T1.utr5p1 | KJC3_013033-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013033-T1.utr3p1 | KJC3_013033-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-25) |
| DBxref | InterPro:IPR035994 |
| DBxref | InterPro:IPR000845 |
| DBxref | PFAM:PF01048 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2103882..2105940 + |
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