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KJC3_013034-T1, KJC3_013034-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013034-T1
Unique NameKJC3_013034-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2114292..2115402-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013034-T1 ID=KJC3_013034-T1|Name=KJC3_013034-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1111bp|location=Sequence derived from alignment at ch3:2114292..2115402- (Aspergillus niger KJC3)
CCGCAGGTAAAAATTTGCACCATAAATCCCAACTATCTGTTCATCTCTGG
ATTTTCTTACATCTTCATAATGACACAGCTGGAATTGGAGTAAGCAGCGC
CTTTCTTATTCAATATCCTGGCTAACCGATGGACAGCGTATTCCAGTCAA
ATTTGATCGATTTTATAGTTGGCCCGACTTGTCGCAGAGTTACTGTTCAC
TCTGCCCTATTATCCGCGGCACCATGGTCCAATGTACTGAAGGCTACTTC
CCAGACGCAAGCCCCTATTTCAGTAAAGGTTCCAGATGCAGTTGAGGATA
TCTTTGTGTACTTCTGCCAGTATCTATATACAGCAGACTATAATATCCCG
CTACCCGACGACACTCCTCCATGTTACGCTAGTTCCGAGAGATGCCGCGC
CCTAGGCTGGAATCACGTCCTACAGCTGGGGGGGAATATATTCCGGAACC
GAGAATCTATCCAGCTTACATCAAACCATCTCATTGGAGAAATGAGCCCA
CCTCCGGCAAGCGCAGGACACTGCCATCAGTTCCATCCCTGTTGGGACTA
TGATGACATATTACTCGCCCATGCTCGGCTTCATCTATTTGCTGCGAAAT
ATGGTTTAAGCAAGCTACATGATTTATCATTGTTTAAGCTCTTACACCTG
CTTCATAAGTTTCCACTTCATCCAAGACGAGTTGGCGACCTCTTAGTACT
GCTGCGACTTGTCTTTCAAGAAAAGGATACGACATATGATCATATTCAGG
AGCTTATGATTCATTACATCACTCGGCATATCAAATTTCTTATCAATAAT
GAGGACTTCAAGGGATTGCTGGAAGACATTCCATGTCTTAACAACCAGTT
ACTGAGGACTCTTGTTGAATTTCTCGGCGAGTAATCAGGTTGGAGGGGAA
TCCGATGGGCGAAGTATTTCTTGATCCTTAGATGTTATTCTCGATTTTTG
TTTGTTTCTTGGCGCCAGTACCAGCTTGGCCTTTATTCTGCACATAAGTG
CATATTTTCTTCCGTACACATGCTTAGTCTCTGCTATTTCAAGTGTATAT
CATAAACCAAGTCATCCTGTCATGCTTATGTAGCAAAGCGACTTTGCTGT
TAATATTGATG
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Coding sequence (CDS) from alignment at ch3:2114292..2115402-

>KJC3_013034-T1 ID=KJC3_013034-T1|Name=KJC3_013034-T1|organism=Aspergillus niger KJC3|type=CDS|length=1536bp|location=Sequence derived from alignment at ch3:2114292..2115402- (Aspergillus niger KJC3)
CGTATTCCAGTCAAATTTGATCGATTTTATAGTTGGCCCGACTTGTCGCA
GAGTTACTGTTCACTCTGCCCTATTATCCGCGGCACCATGGTCCAATGTA
CTGAAGGCTACTTCCCAGACGCAAGCCCCTATTTCAGTAAAGGTTCCAGA
TGCAGTTGAGGATATCTTTGTGTACTTCTGCCAGTATCTATATACAGCAG
ACTATAATATCCCGCTACCCGACGACACTCCTCCATGTTACGCTAGTTCC
GAGAGATGCCGCGCCCTAGGCTGGAATCACGTCCTACAGCTGGGGGGGAA
TATATTCCGGAACCGAGAATCTATCCAGCTTACATCAAACCATCTCATTG
GAGAAATGAGCCCACCTCCGGCAAGCGCAGGACACTGCCATCAGTTCCAT
CCCTGTTGGGACTATGATGACATATTACTCGCCCATGCTCGGCTTCATCT
ATTTGCTGCGAAATATGGTTTAAGCAAGCTACATGATTTATCATTGTTTA
AGCTCTTACACCTGCTTCATAAGTTTCCACTTCATCCAAGACGAGTTGGC
GACCTCTTAGTACTGCTGCGACTTGTCTTTCAAGAAAAGGATACGACATA
TGATCATATTCAGGAGCTTATGATTCATTACATCACTCGGCATATCAAAT
TTCTTATCAATAATGAGGACTTCAAGGGATTGCTGGAAGACATTCCATGT
CTTAACAACCAGTTACTGAGGACTCTTGTTGAATTTCTCGGCGAGTAAAT
GACACAGCTGGAATTGGACGTATTCCAGTCAAATTTGATCGATTTTATAG
TTGGCCCGACTTGTCGCAGAGTTACTGTTCACTCTGCCCTATTATCCGCG
GCACCATGGTCCAATGTACTGAAGGCTACTTCCCAGACGCAAGCCCCTAT
TTCAGTAAAGGTTCCAGATGCAGTTGAGGATATCTTTGTGTACTTCTGCC
AGTATCTATATACAGCAGACTATAATATCCCGCTACCCGACGACACTCCT
CCATGTTACGCTAGTTCCGAGAGATGCCGCGCCCTAGGCTGGAATCACGT
CCTACAGCTGGGGGGGAATATATTCCGGAACCGAGAATCTATCCAGCTTA
CATCAAACCATCTCATTGGAGAAATGAGCCCACCTCCGGCAAGCGCAGGA
CACTGCCATCAGTTCCATCCCTGTTGGGACTATGATGACATATTACTCGC
CCATGCTCGGCTTCATCTATTTGCTGCGAAATATGGTTTAAGCAAGCTAC
ATGATTTATCATTGTTTAAGCTCTTACACCTGCTTCATAAGTTTCCACTT
CATCCAAGACGAGTTGGCGACCTCTTAGTACTGCTGCGACTTGTCTTTCA
AGAAAAGGATACGACATATGATCATATTCAGGAGCTTATGATTCATTACA
TCACTCGGCATATCAAATTTCTTATCAATAATGAGGACTTCAAGGGATTG
CTGGAAGACATTCCATGTCTTAACAACCAGTTACTGAGGACTCTTGTTGA
ATTTCTCGGCGAGTAAATGACACAGCTGGAATTGGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013034KJC3_013034Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013034-T1KJC3_013034-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013034-T1.cdsKJC3_013034-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013034-T1.utr3p1KJC3_013034-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013034-T1.exon2KJC3_013034-T1.exon2Aspergillus niger KJC3exon
KJC3_013034-T1.exon1KJC3_013034-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013034-T1.utr5p1KJC3_013034-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2114292..2115402 -
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