You are here

Home

KJC3_013035-T1, KJC3_013035-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013035-T1
Unique NameKJC3_013035-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:2118482..2119023-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013035-T1 ID=KJC3_013035-T1|Name=KJC3_013035-T1|organism=Aspergillus niger KJC3|type=mRNA|length=542bp|location=Sequence derived from alignment at ch3:2118482..2119023- (Aspergillus niger KJC3)
CACTAATATATTTCCACATAAACGGCTATCTTATCATCTACCCAAGTGTG
ACTATATATCATTTAATATGTCAAGCTCAGGCTTTCCCCACAAGAGCTCC
GCCGATTTTCGTGAAGCAATGAGAAAAATTCTGGATGGAGCTCTACAACT
GTCACTATTCCATGGCTGCAAAGTATATGTTTATGTGGATGATCAGCACG
ACGGATTTACTTTCAAGTCAAATAAAGATTATCTTTGGCCTCCGGCTGAT
CAATTCTTGGTACCTTATAACCTGACCCGAGCTAGAATACATTCATTAAC
TCATCAATATAGAGCATGTATAGCCCGTCTCTAAAAAGGATCCATGGAGA
TGAAATAGTGATCTCTCGGCTTTCCGAGATGGAACGGAAGGAATTAATCC
AGCTATTGCTCTTTTTCTTGTACCTAGCTCGCCACTGGGGATTGCCATCT
CAGGTGCACGCACCAGATGATCCTGATCCTCAGAGTAACACGGACGAAGG
TAGCACATGATTACCAATCAAATGTGCACTAGTCTGTAAGAG
back to top

Coding sequence (CDS) from alignment at ch3:2118482..2119023-

>KJC3_013035-T1 ID=KJC3_013035-T1|Name=KJC3_013035-T1|organism=Aspergillus niger KJC3|type=CDS|length=780bp|location=Sequence derived from alignment at ch3:2118482..2119023- (Aspergillus niger KJC3)
AGCATGTATAGCCCGTCTCTAAAAAGGATCCATGGAGATGAAATAGTGAT
CTCTCGGCTTTCCGAGATGGAACGGAAGGAATTAATCCAGCTATTGCTCT
TTTTCTTGTACCTAGCTCGCCACTGGGGATTGCCATCTCAGGTGCACGCA
CCAGATGATCCTGATCCTCAGAGTAACACGGACGAAGGTAGCACATGAAT
GTCAAGCTCAGGCTTTCCCCACAAGAGCTCCGCCGATTTTCGTGAAGCAA
TGAGAAAAATTCTGGATGGAGCTCTACAACTGTCACTATTCCATGGCTGC
AAAGTATATGTTTATGTGGATGATCAGCACGACGGATTTACTTTCAAGTC
AAATAAAGATTATCTTTGGCCTCCGGCTGATCAATTCTTGAGCATGTATA
GCCCGTCTCTAAAAAGGATCCATGGAGATGAAATAGTGATCTCTCGGCTT
TCCGAGATGGAACGGAAGGAATTAATCCAGCTATTGCTCTTTTTCTTGTA
CCTAGCTCGCCACTGGGGATTGCCATCTCAGGTGCACGCACCAGATGATC
CTGATCCTCAGAGTAACACGGACGAAGGTAGCACATGAATGTCAAGCTCA
GGCTTTCCCCACAAGAGCTCCGCCGATTTTCGTGAAGCAATGAGAAAAAT
TCTGGATGGAGCTCTACAACTGTCACTATTCCATGGCTGCAAAGTATATG
TTTATGTGGATGATCAGCACGACGGATTTACTTTCAAGTCAAATAAAGAT
TATCTTTGGCCTCCGGCTGATCAATTCTTG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013035KJC3_013035Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013035-T1KJC3_013035-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013035-T1.cdsKJC3_013035-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013035-T1.utr3p1KJC3_013035-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013035-T1.exon2KJC3_013035-T1.exon2Aspergillus niger KJC3exon
KJC3_013035-T1.exon1KJC3_013035-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013035-T1.utr5p1KJC3_013035-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:2118482..2119023 -
Powered by Drupal