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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:2147823..2149842- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013036-T1 ID=KJC3_013036-T1|Name=KJC3_013036-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2020bp|location=Sequence derived from alignment at ch3:2147823..2149842- (Aspergillus niger KJC3)
TAGGGAGAGTTAGGGAGAGTTAGGAAGAGTTAGGGAGACTGGGGCTGGAG
ACAATTTTTTGGCTCAAACAATCCTCTTTTCCTCTGAGTCATTGATTGGT
ATGATGTTGAATACGTAGCCCGCTGATCGGACATCCTATTGACATGGAGT
CCCTACCAGAAGGAAGTGAGACAGTGTGTGCAACTTTCAGCATACTCACA
ATCAGCTGTGATTGTGAAATCAGAATCCACTACTGTACAGCTCATCACAA
ATCACATGAACAATGACAACTACCCCGCTTTTCTCCTATTATCCCCATGT
CGAATAATCTCCCCGAGTTCCCAATGTCTCCCTAACACACCCTCACTCTT
TTGTTGGTCATATTCATTCTTCATAGAGCATGGCGTTCAATTTTTCTCGT
GTCTATAAGATCTCATCGGAATTAAACGCAAGTTGTTCCATATCATCAAT
CTATGATGATGTCCTCAAAGAACGCCTGGCTATAACCTTCATTCCCATCC
GCCGCCAAACTCGCGGGCGAATCCCGCTCACAAAGAATGAGATCAAGCGA
AGATATGAGCAGAAAAAGGCACAAAAGGTTTACCTTGATGTGCTGGGCTA
TGATCCTCAATTATTCATTCCATTTGTTCTTGCGGTCTCGCCCAAACTTT
GCGTATCGGCGGGCAAATCAGTAACTCAATTGCACAGAGCAGAGAAGCCT
CTTTGCCTGAAACAAAATGAAAGGGTGAAATTAGAAGCTTTTGCCAGAGA
ACGGAATTTTAGCGAGAATGATCGGTTTAAAGCCTTGCTGGACTCGCTCT
TTCCTGAAGCAAGGCCTGTTACAGACGCAGGTAACGACCCAGTTTGCTGG
GTGTTTGGTGGAGCTTGTTTAACCGCAATGCGATCTCTATTCGGTGAACG
TATTGCGGACAGCATGGATGAAGCCCCACTGCGGGTATATGAAAAATCGA
AAAGCCCAACCCTCAAGTCGACGGAATGCGTGAAAACCAATTTCCCAAGG
CGCGTTTTTCAGGATGCGATTATCACCCTGACAATAGGAAATGCCAGGAA
GCTTGCGAGCATTTTCTATCCGTCAATAAGTGAGAACGTGTTCGTGGCTC
AATTCTTAGAAGAACATGCAGCGGGTGATGCTGGAACAACTATATCTCAG
GCTCAAATGAGAAACAAGGGTTGGTAGAAATAGCTATGGGAATATAATAT
AACTGACCTCTATTCAGAGATCGATGGCGGGTATTATACATTTCGAGGTG
CTTCTGTAGCAGCCATTGCCGCAAACTTCAACCCAAGCCTCTTCCGTGCG
GTTGAAGAGAGCCAACTGCGTGTCTGGGAGAAAAACAATCTCCTTACAGA
AACAACCGATTGCATCGTAATGGAAATCTTTCGCCAGCCACCCCACCATG
GTACAATGCATGTACGGATAGGATTTAACTTGGGAACAGATATAGTAAAT
GCGCTATATGCACATAGTTACACCTGAATCATTGGACTATTGCTTTGCCT
CTCACAATATAAACCCCCACTCGCGGCGGAAGTGTCCTCATTTCACCGTC
TCCAGTAGTAGACCATATCTTCTCACCCTTCTCATCTTGGAACTCTATGT
TTTCGCATTGTAGGCAATAGAGTTTCCTCGGGTAGTCCTTTGCCCAAATG
TAATGTATCGGTTTCTTCTCGCAGGTATCGAAAAAGTCGACTGTCACAGA
CAACTGGTCCCAACGCGCCCTCTTAATTATATCAGAAAAGTCAGCTCAAC
TGAAATATTGATAAATGGGCAGTTATAACAAACCAGGATCTCTTCTGTCA
CTTTCTCCGTCTCTGTCATGGCAAGTTCATGGGCAGCCTTTGTCTCCTCT
GATAGATGATCTTGGACGTTGACATTAATATGGAGGTGACCATGATTTTA
TATCATTGAGAAGTTTGTGAAAAGCGACATACCGAGTATTAAGAGAGGGT
GTCAGTCCGACATTTCAGAAGTGAACGTCCCACCACGAAGCTCCAAGCCC
CGCGACGTCAGGTATCCATG back to topCoding sequence (CDS) from alignment at ch3:2147823..2149842- >KJC3_013036-T1 ID=KJC3_013036-T1|Name=KJC3_013036-T1|organism=Aspergillus niger KJC3|type=CDS|length=2100bp|location=Sequence derived from alignment at ch3:2147823..2149842- (Aspergillus niger KJC3)
AGATCGATGGCGGGTATTATACATTTCGAGGTGCTTCTGTAGCAGCCATT
GCCGCAAACTTCAACCCAAGCCTCTTCCGTGCGGTTGAAGAGAGCCAACT
GCGTGTCTGGGAGAAAAACAATCTCCTTACAGAAACAACCGATTGCATCG
TAATGGAAATCTTTCGCCAGCCACCCCACCATGGTACAATGCATGTACGG
ATAGGATTTAACTTGGGAACAGATATAGTAAATGCGCTATATGCACATAG
TTACACCTGAATGGCGTTCAATTTTTCTCGTGTCTATAAGATCTCATCGG
AATTAAACGCAAGTTGTTCCATATCATCAATCTATGATGATGTCCTCAAA
GAACGCCTGGCTATAACCTTCATTCCCATCCGCCGCCAAACTCGCGGGCG
AATCCCGCTCACAAAGAATGAGATCAAGCGAAGATATGAGCAGAAAAAGG
CACAAAAGGTTTACCTTGATGTGCTGGGCTATGATCCTCAATTATTCATT
CCATTTGTTCTTGCGGTCTCGCCCAAACTTTGCGTATCGGCGGGCAAATC
AGTAACTCAATTGCACAGAGCAGAGAAGCCTCTTTGCCTGAAACAAAATG
AAAGGGTGAAATTAGAAGCTTTTGCCAGAGAACGGAATTTTAGCGAGAAT
GATCGGTTTAAAGCCTTGCTGGACTCGCTCTTTCCTGAAGCAAGGCCTGT
TACAGACGCAGGTAACGACCCAGTTTGCTGGGTGTTTGGTGGAGCTTGTT
TAACCGCAATGCGATCTCTATTCGGTGAACGTATTGCGGACAGCATGGAT
GAAGCCCCACTGCGGGTATATGAAAAATCGAAAAGCCCAACCCTCAAGTC
GACGGAATGCGTGAAAACCAATTTCCCAAGGCGCGTTTTTCAGGATGCGA
TTATCACCCTGACAATAGGAAATGCCAGGAAGCTTGCGAGCATTTTCTAT
CCGTCAATAAGTGAGAACGTGTTCGTGGCTCAATTCTTAGAAGAACATGC
AGCGGGTGATGCTGGAACAACTATATCTCAGGCTCAAATGAGAAACAAGG
AGATCGATGGCGGGTATTATACATTTCGAGGTGCTTCTGTAGCAGCCATT
GCCGCAAACTTCAACCCAAGCCTCTTCCGTGCGGTTGAAGAGAGCCAACT
GCGTGTCTGGGAGAAAAACAATCTCCTTACAGAAACAACCGATTGCATCG
TAATGGAAATCTTTCGCCAGCCACCCCACCATGGTACAATGCATGTACGG
ATAGGATTTAACTTGGGAACAGATATAGTAAATGCGCTATATGCACATAG
TTACACCTGAATGGCGTTCAATTTTTCTCGTGTCTATAAGATCTCATCGG
AATTAAACGCAAGTTGTTCCATATCATCAATCTATGATGATGTCCTCAAA
GAACGCCTGGCTATAACCTTCATTCCCATCCGCCGCCAAACTCGCGGGCG
AATCCCGCTCACAAAGAATGAGATCAAGCGAAGATATGAGCAGAAAAAGG
CACAAAAGGTTTACCTTGATGTGCTGGGCTATGATCCTCAATTATTCATT
CCATTTGTTCTTGCGGTCTCGCCCAAACTTTGCGTATCGGCGGGCAAATC
AGTAACTCAATTGCACAGAGCAGAGAAGCCTCTTTGCCTGAAACAAAATG
AAAGGGTGAAATTAGAAGCTTTTGCCAGAGAACGGAATTTTAGCGAGAAT
GATCGGTTTAAAGCCTTGCTGGACTCGCTCTTTCCTGAAGCAAGGCCTGT
TACAGACGCAGGTAACGACCCAGTTTGCTGGGTGTTTGGTGGAGCTTGTT
TAACCGCAATGCGATCTCTATTCGGTGAACGTATTGCGGACAGCATGGAT
GAAGCCCCACTGCGGGTATATGAAAAATCGAAAAGCCCAACCCTCAAGTC
GACGGAATGCGTGAAAACCAATTTCCCAAGGCGCGTTTTTCAGGATGCGA
TTATCACCCTGACAATAGGAAATGCCAGGAAGCTTGCGAGCATTTTCTAT
CCGTCAATAAGTGAGAACGTGTTCGTGGCTCAATTCTTAGAAGAACATGC
AGCGGGTGATGCTGGAACAACTATATCTCAGGCTCAAATGAGAAACAAGG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013036-T1.utr3p1 | KJC3_013036-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013036-T1.utr5p1 | KJC3_013036-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:2147823..2149842 - |
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