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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4721310..4722346+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013043-T1 ID=KJC3_013043-T1|Name=KJC3_013043-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1037bp|location=Sequence derived from alignment at ch3:4721310..4722346+ (Aspergillus niger KJC3)
CACTTGTGAATACTACCCTCATCATCTTGACCTCGTCATCTTAACCTCCT
CATCTCAACCTCCTCATCTCAGCCTCATCAAGCATAGCAAATCAATCGAA
CCGTCCACCTATCTACACCGTTTCTCCAGATCTTGAGATACTAGAACGCT
TACCATGGAACGCCTAAGAAACGCAACAACCTCAATGTTTAAATATGGAC
AAACTGTTGCTCGAGAACATACAACCGCCTTAGTCGCTAGTGGTACCGGA
CTTGCTCTCGCTACAGCACCGATCACCGGCCCTGCAATATTAGGTGCTGT
TGGTTTCAGCGCTGCAGGGCCTGTTGCGGCTTCTTTTGCTGCAGCATGGC
AGTCTTCAATCGGGGTAGTTCAAGCTGGGAGTCTGTTTGCCACCCTACAG
GGAGCTGCAATGGGAGGCGCTGCTGCGGGGACATTTACAACTGCTTCGAA
TATTGGAATTGGGATGGTGGGATCCGTGGCAGTTGGAAAACAATGGACTG
ATATAAAGAAAAGACTATGGATGAAACATGATAGCGAACATTTTGAGGAA
GCTGGATATTATGGTAATACATAAATGCCTACCGGTATGCTGCTCAAGGC
TAACATGAATAAAGATGAAAGTCAGCCAGCTGAAGATAACAAAGACGTGG
CAAACAACCCACAAATGCCTGACGTTGATGATTTGCTAGGCACAGAATTC
GCGAAATTTCTCGAGATCGACATGTCTTGAATAGAAGTGTCATATGTACT
GCTGTACATGTGTGAGAGATCCAACGTGATTTTCTGGGAGGATCTCTGCT
GGCTCGGGAAAATTCTAGTGTGGGAACACGCGCTTGTACGCGCTGGTACA
GGCTCTGTAGAATATGCTGAGTCATTGGACACCCATTACCACTTAGTATA
GGAACCTGTACCCGAGGTCATCAGATAATTTATGAAAGACGATTAGTGTA
TCTCGTGATAAGGGTTTCAAAGAAAGTCGAAGACTATAAACATTTGCACC
GGTTTTTGATCAGCTGTATATATCTAAATATGTGAGC back to topCoding sequence (CDS) from alignment at ch3:4721310..4722346+ >KJC3_013043-T1 ID=KJC3_013043-T1|Name=KJC3_013043-T1|organism=Aspergillus niger KJC3|type=CDS|length=1050bp|location=Sequence derived from alignment at ch3:4721310..4722346+ (Aspergillus niger KJC3)
ATGGAACGCCTAAGAAACGCAACAACCTCAATGTTTAAATATGGACAAAC
TGTTGCTCGAGAACATACAACCGCCTTAGTCGCTAGTGGTACCGGACTTG
CTCTCGCTACAGCACCGATCACCGGCCCTGCAATATTAGGTGCTGTTGGT
TTCAGCGCTGCAGGGCCTGTTGCGGCTTCTTTTGCTGCAGCATGGCAGTC
TTCAATCGGGGTAGTTCAAGCTGGGAGTCTGTTTGCCACCCTACAGGGAG
CTGCAATGGGAGGCGCTGCTGCGGGGACATTTACAACTGCTTCGAATATT
GGAATTGGGATGGTGGGATCCGTGGCAGTTGGAAAACAATGGACTGATAT
AAAGAAAAGACTATGGATGAAACATGATAGCGAACATTTTGAGGAAGCTG
GATATTATGATGAAAGTCAGCCAGCTGAAGATAACAAAGACGTGGCAAAC
AACCCACAAATGCCTGACGTTGATGATTTGCTAGGCACAGAATTCGCGAA
ATTTCTCGAGATCGACATGTCTTGAATGGAACGCCTAAGAAACGCAACAA
CCTCAATGTTTAAATATGGACAAACTGTTGCTCGAGAACATACAACCGCC
TTAGTCGCTAGTGGTACCGGACTTGCTCTCGCTACAGCACCGATCACCGG
CCCTGCAATATTAGGTGCTGTTGGTTTCAGCGCTGCAGGGCCTGTTGCGG
CTTCTTTTGCTGCAGCATGGCAGTCTTCAATCGGGGTAGTTCAAGCTGGG
AGTCTGTTTGCCACCCTACAGGGAGCTGCAATGGGAGGCGCTGCTGCGGG
GACATTTACAACTGCTTCGAATATTGGAATTGGGATGGTGGGATCCGTGG
CAGTTGGAAAACAATGGACTGATATAAAGAAAAGACTATGGATGAAACAT
GATAGCGAACATTTTGAGGAAGCTGGATATTATGATGAAAGTCAGCCAGC
TGAAGATAACAAAGACGTGGCAAACAACCCACAAATGCCTGACGTTGATG
ATTTGCTAGGCACAGAATTCGCGAAATTTCTCGAGATCGACATGTCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013043-T1.utr5p1 | KJC3_013043-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013043-T1.utr3p1 | KJC3_013043-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009311 |
| DBxref | PFAM:PF06140 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4721310..4722346 + |
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