|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4905831..4907229- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013050-T1 ID=KJC3_013050-T1|Name=KJC3_013050-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1399bp|location=Sequence derived from alignment at ch3:4905831..4907229- (Aspergillus niger KJC3)
CGTACATTCAAGATCAAGAGGCTCACATTCGCGCCCTTATGATGTAGCAT
TCCTCCAATCTTGCACGCCGAAGGCTGATGCGGATTTTACCCGCGTCCAA
ACATCGTCCTGCCGTGGGCTTTTCAGGACCTGGTCAGTGAGTATCAATAC
TGTTTCCTGGATAATGCTTTGCTAGTTTCTGATCGGAGAATATGAGGGTG
GGCAATAGCCAGACCGATTCAACCCCCCACCCCCCTCGACCCTCTGGGGT
ATAAAACCAGTACCTCCGTCTTGTCATCTTGCAGTCGCAGCCGCAGCCGC
TCTGTCAAAATCCAACAACTATCTTTGTCATGACAGATCTGCGCACGAAA
CGCCCACGGACTCTCTGGTTGGGCAGGGATTCATCAACTCGAGCTGAAGA
GTTTCGATCATCAACAGAACCGAACACTGAAGAAACGCCAAAACCAATCC
CGGCTACCAACAATCGCGATGGTATCACACATTTCAGTTGCTACGAAGAG
AACCCGTGGAGCGTGTACGAACCACGAGCCAAGATTTGTCGCAAGCAACC
AATCACCCTGGCCCAGCATCGCAAGCACAGACAGAATATTGTAAACATCC
GATGCCTTCCCATTGACCGACCTCAGGTCCAAAGCCTGTTAGAGACGATC
AGACGTCTTTCTCACCCCATATTCCCACGGCTTCTGGAGTCGTACTACCA
CACGGGCGAGCTGCACCTGATTTGGGAACCGATGGAGATCACAGTGAACT
ACATTTTAACCGCCCGGTGGCCGGTCAACGAGACCGAGCTGGCATACATT
CTCCGGTCGGTGAGTGTTGCCAGCGGCCATTGTGCGACGGGAAGGCAGTG
GATACTAACCCAAGCAGACCCTTGACGGCATTAGATTCCTTCGGGATCAG
GGAAGAGCATTGGCCATCCTAGAGGCGGAGACAATCCTCTTGGACCGAAG
CGGCCATGTCCGCCTTGGTAATTACGTCTCTTTGATCGTCGCTACGAACA
TTGTCAACTGACTTGGCGCACTAGCTGGGGTGGAACAGAGCTACCAGATC
TCAGCATCCGATATGAATGCCGAGACGCTGAAATTGAACGCACTAGCAAC
AATCACGAGGGGTCTAATGGCCACTGGTGCAGGACAGGTCAGATGGAGCT
CTAAGGTCCGAGCCTTCCTCGAAAATCTGACCACCAAGTCTTTGGATGAG
TTGATGCAGGTAAGTGGGCAGCTAAGAGATGGAGCAACAGTTGGTAACAG
AGTCCTAGGATACATTTCTCGAAGCAGCAACGGACGAAAGAGATCTAAAG
CTGTGCGTCCATGTTGTGAACAAAAAAGCCAGAAACGATCTTGTACTACT
CTGACCGGTCTGGATCCGATGGCATCCACCATCATCTAGACATGTTTGT back to topCoding sequence (CDS) from alignment at ch3:4905831..4907229- >KJC3_013050-T1 ID=KJC3_013050-T1|Name=KJC3_013050-T1|organism=Aspergillus niger KJC3|type=CDS|length=2835bp|location=Sequence derived from alignment at ch3:4905831..4907229- (Aspergillus niger KJC3)
CTGGGGTGGAACAGAGCTACCAGATCTCAGCATCCGATATGAATGCCGAG
ACGCTGAAATTGAACGCACTAGCAACAATCACGAGGGGTCTAATGGCCAC
TGGTGCAGGACAGGTCAGATGGAGCTCTAAGGTCCGAGCCTTCCTCGAAA
ATCTGACCACCAAGTCTTTGGATGAGTTGATGCAGGTAAGTGGGCAGCTA
AGAGATGGAGCAACAGTTGGTAACAGAGTCCTAGGATACATTTCTCGAAG
CAGCAACGGACGAAAGAGATCTAAAGCTGTGCGTCCATGTTGTGAACAAA
AAAGCCAGAAACGATCTTGTACTACTCTGACCGGTCTGGATCCGATGGCA
TCCACCATCATCTAGACCCTTGACGGCATTAGATTCCTTCGGGATCAGGG
AAGAGCATTGGCCATCCTAGAGGCGGAGACAATCCTCTTGGACCGAAGCG
GCCATGTCCGCCTTGATGACAGATCTGCGCACGAAACGCCCACGGACTCT
CTGGTTGGGCAGGGATTCATCAACTCGAGCTGAAGAGTTTCGATCATCAA
CAGAACCGAACACTGAAGAAACGCCAAAACCAATCCCGGCTACCAACAAT
CGCGATGGTATCACACATTTCAGTTGCTACGAAGAGAACCCGTGGAGCGT
GTACGAACCACGAGCCAAGATTTGTCGCAAGCAACCAATCACCCTGGCCC
AGCATCGCAAGCACAGACAGAATATTGTAAACATCCGATGCCTTCCCATT
GACCGACCTCAGGTCCAAAGCCTGTTAGAGACGATCAGACGTCTTTCTCA
CCCCATATTCCCACGGCTTCTGGAGTCGTACTACCACACGGGCGAGCTGC
ACCTGATTTGGGAACCGATGGAGATCACAGTGAACTACATTTTAACCGCC
CGGTGGCCGGTCAACGAGACCGAGCTGGCATACATTCTCCGGTCGCTGGG
GTGGAACAGAGCTACCAGATCTCAGCATCCGATATGAATGCCGAGACGCT
GAAATTGAACGCACTAGCAACAATCACGAGGGGTCTAATGGCCACTGGTG
CAGGACAGGTCAGATGGAGCTCTAAGGTCCGAGCCTTCCTCGAAAATCTG
ACCACCAAGTCTTTGGATGAGTTGATGCAGGTAAGTGGGCAGCTAAGAGA
TGGAGCAACAGTTGGTAACAGAGTCCTAGGATACATTTCTCGAAGCAGCA
ACGGACGAAAGAGATCTAAAGCTGTGCGTCCATGTTGTGAACAAAAAAGC
CAGAAACGATCTTGTACTACTCTGACCGGTCTGGATCCGATGGCATCCAC
CATCATCTAGACCCTTGACGGCATTAGATTCCTTCGGGATCAGGGAAGAG
CATTGGCCATCCTAGAGGCGGAGACAATCCTCTTGGACCGAAGCGGCCAT
GTCCGCCTTGATGACAGATCTGCGCACGAAACGCCCACGGACTCTCTGGT
TGGGCAGGGATTCATCAACTCGAGCTGAAGAGTTTCGATCATCAACAGAA
CCGAACACTGAAGAAACGCCAAAACCAATCCCGGCTACCAACAATCGCGA
TGGTATCACACATTTCAGTTGCTACGAAGAGAACCCGTGGAGCGTGTACG
AACCACGAGCCAAGATTTGTCGCAAGCAACCAATCACCCTGGCCCAGCAT
CGCAAGCACAGACAGAATATTGTAAACATCCGATGCCTTCCCATTGACCG
ACCTCAGGTCCAAAGCCTGTTAGAGACGATCAGACGTCTTTCTCACCCCA
TATTCCCACGGCTTCTGGAGTCGTACTACCACACGGGCGAGCTGCACCTG
ATTTGGGAACCGATGGAGATCACAGTGAACTACATTTTAACCGCCCGGTG
GCCGGTCAACGAGACCGAGCTGGCATACATTCTCCGGTCGCTGGGGTGGA
ACAGAGCTACCAGATCTCAGCATCCGATATGAATGCCGAGACGCTGAAAT
TGAACGCACTAGCAACAATCACGAGGGGTCTAATGGCCACTGGTGCAGGA
CAGGTCAGATGGAGCTCTAAGGTCCGAGCCTTCCTCGAAAATCTGACCAC
CAAGTCTTTGGATGAGTTGATGCAGGTAAGTGGGCAGCTAAGAGATGGAG
CAACAGTTGGTAACAGAGTCCTAGGATACATTTCTCGAAGCAGCAACGGA
CGAAAGAGATCTAAAGCTGTGCGTCCATGTTGTGAACAAAAAAGCCAGAA
ACGATCTTGTACTACTCTGACCGGTCTGGATCCGATGGCATCCACCATCA
TCTAGACCCTTGACGGCATTAGATTCCTTCGGGATCAGGGAAGAGCATTG
GCCATCCTAGAGGCGGAGACAATCCTCTTGGACCGAAGCGGCCATGTCCG
CCTTGATGACAGATCTGCGCACGAAACGCCCACGGACTCTCTGGTTGGGC
AGGGATTCATCAACTCGAGCTGAAGAGTTTCGATCATCAACAGAACCGAA
CACTGAAGAAACGCCAAAACCAATCCCGGCTACCAACAATCGCGATGGTA
TCACACATTTCAGTTGCTACGAAGAGAACCCGTGGAGCGTGTACGAACCA
CGAGCCAAGATTTGTCGCAAGCAACCAATCACCCTGGCCCAGCATCGCAA
GCACAGACAGAATATTGTAAACATCCGATGCCTTCCCATTGACCGACCTC
AGGTCCAAAGCCTGTTAGAGACGATCAGACGTCTTTCTCACCCCATATTC
CCACGGCTTCTGGAGTCGTACTACCACACGGGCGAGCTGCACCTGATTTG
GGAACCGATGGAGATCACAGTGAACTACATTTTAACCGCCCGGTGGCCGG
TCAACGAGACCGAGCTGGCATACATTCTCCGGTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013050-T1.utr3p1 | KJC3_013050-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013050-T1.utr5p1 | KJC3_013050-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4905831..4907229 - |
|
