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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4926562..4928812+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013051-T1 ID=KJC3_013051-T1|Name=KJC3_013051-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2251bp|location=Sequence derived from alignment at ch3:4926562..4928812+ (Aspergillus niger KJC3)
CCGTAAGAGATGCGACCGCGAAATCTCGAGCAGCTCAAAAGGCAGACTAG
CCCAGTGCCAATTTTGGCTGACAACTCTCTCCTCTACGGGAACAGGACTG
ACGACGTCGAGCGACAGTGTTCGCCAAGATTAAATTCCCTCGTTAGGTCC
GTCTACCATTGCATTGAAATCTTTCGCATTAGTTTTTCCCCACGACAACA
GAACCATGGGATCCGAACTTGGGGTCACTGCCGCATCCACGCCCCAGCCA
GCCTATATTGCGGTCAGTATATGGTGGGCCTGCTGGGCGGGTACCTGGAC
GGTTGTTGTTGCGTCTGGCATGGCCTATCTCATCGCCCATCGCAACACGC
CTCCACTCCTGCTGCGAGGCCTCGGACTTTCGCTGTCCGCTGTTGTTATG
CTTCATGTCTATTGGACTTCAGTGCAATTTGGAACCATGATTGGCACCAT
CATGCCCGGAGATGCCGAGTACTGGATCATGGGCACCTATCTGCCGTGTG
GCATTGCCCTGTTCCACGCATCGAATAGTCGCTTCTACCATGTGGCGAAG
CTTCAGGAGGGCTATATTATTCGTAGTAGTGGTGGGATTCATTTGTCCTC
CACCTCGAGGGGCAAGCTCGGTGTCGTAGACCGGTTCCGTCGCCTTGCCT
ACACCACCAAGATCCTCGTGCTTGTTACGATGGCATCGCTCGTTCAGGTA
AAACGGCCACCGTCTACCCCTACTGCCACCGCATCAGTGTCTAATCGAAT
CAATAGGTGTTCCTCACGGTCTCGATGTGGCTTATCTCTCGCAAATGGCA
CCGTACTTGGGGGATTCCAGGCACCGAGGTCCATGGGACCGAGATGCAGC
AAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTAAGAACGCTTCTGACAT
ACGCCCGGCGCATATGCGACAAGAGTTGCACGCTAATTGATATGCAGGTG
GCCTGGCGTGTTTGGACAGGTTTTCTGGTCGTGGATTGTGGGCCCCGTCG
TTCTCTGGAAATCCCGTCACATCCACGACACCCACGGCTGGAGAGTCCAG
ACGATGGGCTGCATCATCGCCAAGTGAGCCAGTCGGACCGATGAGGCCTG
TGGAACGGCTAACCCGTTATGTAGTCTCCCTGCGACGCCGATGTGGCTCA
TCGCCCTCTATGTTCCCGCCATGGAGCCGGTCTGTCAGTACTGGTTACCG
CCCCAGTGGTAGGTGCTCCGAGCTGTGACCAACAGGAAAATAGAAATGAA
GAAGAAAAGAAGCAAGAAAACGTGGCTGACGTCTGTAGGATCTGCCTCTC
TATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGAGAGGTAA
TGCGCCATCACGCTATCCAACAAGGGGCCTTCGATTCGATCGCACGGTGG
GAACCCAATACCAATCCCTTTGCTGATGGCACCATGGCCCGCAGGTCAGC
CTCCATTCTTGTCGAGCTCACAGGGTCTGGCCGGGAATCATGGAGTAGAT
CTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCG
CTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGCTGCAGGATTTCTCCGC
CCATTGCGACTTTTCCGGAGAGAATATAGCTTTCCTGACCCGAGTGGCAG
AATGGAAGAGCTCGCTGCCCCATACGGTCTGGGATAGCAGGATTTCAGAC
TATGGAGATCTTACCGACTTGATTCGGGAGCAGTTTCACCGCGCGCTGTG
TATTTACACGACCTTCATCAGTGATCGCCATGCGCAGTTACCGATCAACG
TCTCTTCGCAGGAACGGAAGGAGCTGGAGAACGTCTTTGAGGGCCCTGCT
GGGCTTCTCTTCGGAGACGGGCGCCCGGCCAATCCCGCCGTTCCGTTCGA
TTCGCCAGGCTATGGCCCCACGCCCTCAGCGTCTCCGATCGCCTCCATAA
AGGGCGAGTCCGGTTCGCTATTCGCCGACAATGGCCAGGTAAAATACTGG
GGCGAGGTTCCCCAAACATTCAATGCGACGGTCTTTGACCGAGCCGAGGA
GAGCATCAAGTACCTCGTTCTCACCAACACGTGGCCGAAGTTTGTTCGAA
GCCGCGGGATCGCAGCTGAGGTTGATTTGCTGGCGGGGAGCGAGAGTCCT
GCGTAGCTGGTTCCGGAATGAGGTCGCCAGCGATGGGAGATTGGACTGCA
TGGCATCTGTCTGGGATGTTGATAAAATACCATAGATAAATATGTTGGAG
C back to topCoding sequence (CDS) from alignment at ch3:4926562..4928812+ >KJC3_013051-T1 ID=KJC3_013051-T1|Name=KJC3_013051-T1|organism=Aspergillus niger KJC3|type=CDS|length=1872bp|location=Sequence derived from alignment at ch3:4926562..4928812+ (Aspergillus niger KJC3)
ATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGGTCTGTCAGTA
CTGGTTACCGCCCCAGTGGATCTGCCTCTCTATCTGGGTGATGGAGGTTT
TTGCTGTTCTCCTGCCGTGCCGAGAGGTAATGCGCCATCACGCTATCCAA
CAAGGGGCCTTCGATTCGATCGCACGGTGGGAACCCAATACCAATCCCTT
TGCTGATGGCACCATGGCCCGCAGGTCAGCCTCCATTCTTGTCGAGCTCA
CAGGGTCTGGCCGGGAATCATGGAGTAGATCTCTTGGCTCCAGCTCCAGC
TCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCG
CAATCCTGCCCCGCTGCAGGATTTCTCCGCCCATTGCGACTTTTCCGGAG
AGAATATAGCTTTCCTGACCCGAGTGGCAGAATGGAAGAGCTCGCTGCCC
CATACGGTCTGGGATAGCAGGATTTCAGACTATGGAGATCTTACCGACTT
GATTCGGGAGCAGTTTCACCGCGCGCTGTGTATTTACACGACCTTCATCA
GTGATCGCCATGCGCAGTTACCGATCAACGTCTCTTCGCAGGAACGGAAG
GAGCTGGAGAACGTCTTTGAGGGCCCTGCTGGGCTTCTCTTCGGAGACGG
GCGCCCGGCCAATCCCGCCGTTCCGTTCGATTCGCCAGGCTATGGCCCCA
CGCCCTCAGCGTCTCCGATCGCCTCCATAAAGGGCGAGTCCGGTTCGCTA
TTCGCCGACAATGGCCAGGTAAAATACTGGGGCGAGGTTCCCCAAACATT
CAATGCGACGGTCTTTGACCGAGCCGAGGAGAGCATCAAGTACCTCGTTC
TCACCAACACGTGGCCGAAGTTTGTTCGAAGCCGCGGGATCGCAGCTGAG
GTTGATTTGCTGGCGGGGAGCGAGAGTCCTGCGTAGATGTGGCTCATCGC
CCTCTATGTTCCCGCCATGGAGCCGGTCTGTCAGTACTGGTTACCGCCCC
AGTGGATCTGCCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTG
CCGTGCCGAGAGGTAATGCGCCATCACGCTATCCAACAAGGGGCCTTCGA
TTCGATCGCACGGTGGGAACCCAATACCAATCCCTTTGCTGATGGCACCA
TGGCCCGCAGGTCAGCCTCCATTCTTGTCGAGCTCACAGGGTCTGGCCGG
GAATCATGGAGTAGATCTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCAT
ATTCACCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCTGCCCCGC
TGCAGGATTTCTCCGCCCATTGCGACTTTTCCGGAGAGAATATAGCTTTC
CTGACCCGAGTGGCAGAATGGAAGAGCTCGCTGCCCCATACGGTCTGGGA
TAGCAGGATTTCAGACTATGGAGATCTTACCGACTTGATTCGGGAGCAGT
TTCACCGCGCGCTGTGTATTTACACGACCTTCATCAGTGATCGCCATGCG
CAGTTACCGATCAACGTCTCTTCGCAGGAACGGAAGGAGCTGGAGAACGT
CTTTGAGGGCCCTGCTGGGCTTCTCTTCGGAGACGGGCGCCCGGCCAATC
CCGCCGTTCCGTTCGATTCGCCAGGCTATGGCCCCACGCCCTCAGCGTCT
CCGATCGCCTCCATAAAGGGCGAGTCCGGTTCGCTATTCGCCGACAATGG
CCAGGTAAAATACTGGGGCGAGGTTCCCCAAACATTCAATGCGACGGTCT
TTGACCGAGCCGAGGAGAGCATCAAGTACCTCGTTCTCACCAACACGTGG
CCGAAGTTTGTTCGAAGCCGCGGGATCGCAGCTGAGGTTGATTTGCTGGC
GGGGAGCGAGAGTCCTGCGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013051-T1.utr5p1 | KJC3_013051-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013051-T1.utr3p1 | KJC3_013051-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036305 |
| DBxref | InterPro:IPR016137 |
| DBxref | PFAM:PF00615 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4926562..4928812 + |
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