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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:4937941..4939392+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013053-T1 ID=KJC3_013053-T1|Name=KJC3_013053-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1452bp|location=Sequence derived from alignment at ch3:4937941..4939392+ (Aspergillus niger KJC3)
GGGGAACAATGAGAGGGTTCTAGATATCTGTCGATACCGTGCCAGTTTTA
AAGCACTCGCCCCCTAAAACAGCGCCGATTAGGGCCATCTGGATCACTAG
CATTATAGAGTTTGCAGCCCGCTAGATAAGACCTGATTGCGCATTATAAT
CGTATGTCGAGGGCCCGGTCAACGATATGCGTTAATCGACCCATGGCGGT
AGACGCATTCTCTCCCCCGTCCCTGCCCATTTTGCCCGCACCGTTCTCTA
CCCGCCACCATCCCTCAACTTCTTTCAAAAGACCTCACCACGGATGTATT
TATGCAGAACGATTGGGAAGAACGTAATTGACCATCACATCAAGTCTATA
CGATTTAACTATTCATTCTGACATTACCTGGGCTCTTTCCCCGAAGGTCA
CCATGTCTCACCCGCAACAACAATGTGCGGTCCGTGGATTTGTGTTTGGG
GCCTAGTCTGCTGACTTCCTCATGGCTCAACTATAACGAGGGGAGATAAG
CTATTCAGCGTTAGGCTGCGCTCAGTACGACGTTGTTCTTTAAATATCAA
CAGCCAGGTCGCCATGATTCCCAGGATTGTCATCAAGCATGCGGCCAACA
CACCAAGCTCGCATTGAAACCGAGGAGAAGGCATTGGAAGCCTACCGCCA
GGAGCGCTACCAGGGTAGCGCCCGAGTCCGTCTGGATTGTCTGACCTTCG
AGAATGGCTTTGGCCGCTTGATGGACGACGGCCGAAATGCCCTCCGAATG
GAGCAGATCCTTGAGATACAAGGGTGCCTCCGTATCAATCGAGAGTACCA
TGTGCCCGTCTTGGTCCAAGCCACGGACTGGGGCTCCCACATCAGGCTAT
TGCCGTGCGACACGGAGCCGTTTCCCGAGCTGATCGTGCCCTTGAACATG
TCGCTGCGCGCCTTAGGCCACGAGAATGTCATCGCCGCAGCGCGAAAAAA
GCTCTACGGCGAGAACCGATGGTGGGTGGTCGATGTGTATGTGGAGGATC
CTAGTAAGTTGTCTTTGAAGTCATTCCGAGTCTCAGCGTGTGTGCCCCTC
CCCGTTCACCTGCTAAGTGTGAGTCGCCAGATGAGCAACCACAAAGACAA
ACTCTCCATTCCCATCTCGTCCGCTCGCTCCGAGAGCATTTTCCAAACCA
ACGCCGACCGCCGGACGGATTGATCTACGAAAGAATTCGGTTTTATCAAG
GAAAGCTGGGCCATCCACCGGACGAAAATGCCGAGGCGGTATGGTGGGCC
GTCCTCCGACACGACCCCAAGAGTAAGAAGCATGTATATCTCCAGGCCTT
TCTCCAACATCCCAGTTTCCCACCAGCATTTGATGCCCTACTCCTTATTC
CGGGGCTTTGGGCCAAAATGCAACTGGGCGTGCTGCATACCATGGTGTCA
CTGCGATGTGACGAGGTGAGTGGCCCAAGTGTCTACGAAATGAAAGACTC
TT back to topCoding sequence (CDS) from alignment at ch3:4937941..4939392+ >KJC3_013053-T1 ID=KJC3_013053-T1|Name=KJC3_013053-T1|organism=Aspergillus niger KJC3|type=CDS|length=585bp|location=Sequence derived from alignment at ch3:4937941..4939392+ (Aspergillus niger KJC3)
ATGCGGCCAACACACCAAGCTCGCATTGAAACCGAGGAGAAGGCATTGGA
AGCCTACCGCCAGGAGCGCTACCAGGGTAGCGCCCGAGTCCGTCTGGATT
GTCTGACCTTCGAGAATGGCTTTGGCCGCTTGATGGACGACGGCCGAAAT
GCCCTCCGAATGGAGCAGATCCTTGAGATACAAGGGTGCCTCCGTATCAA
TCGAGAGTACCATGTGCCCGTCTTGGTCCAAGCCACGGACTGGGGCTCCC
ACATCAGGCTATTGCCGTGCGACACGGAGCCGTTTCCCGAGCTGATCGTG
CCCTTGAACATGTCGCTGCGCGCCTTAGGCCACGAGAATGTCATCGCCGC
AGCGCGAAAAAAGCTCTACGGCGAGAACCGATGGTGGGTGGTCGATGTGT
ATGTGGAGGATCCTAGTAAGTTGTCTTTGAAGTCATTCCGAGTCTCAGCG
TGTGTGCCCCTCCCCGTTCACCTGCTAAGTGTGAGTCGCCAGATGAGCAA
CCACAAAGACAAACTCTCCATTCCCATCTCGTCCGCTCGCTCCGAGAGCA
TTTTCCAAACCAACGCCGACCGCCGGACGGATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013053-T1.utr5p1 | KJC3_013053-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013053-T1.utr3p1 | KJC3_013053-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR022198 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:4937941..4939392 + |
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