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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5219422..5222803+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013062-T2 ID=KJC3_013062-T2|Name=KJC3_013062-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3382bp|location=Sequence derived from alignment at ch3:5219422..5222803+ (Aspergillus niger KJC3)
CTTCGTGTTGATAAATTAGTGATAGTTGCCCTTTCGGCTGAGCCGCCGGG
CGTTAATGAATTGTGTGTGTGTATTATGCGTAGAGTCATATTATCACTAT
GCAAGAAAAAACCACGGACCCTGTAAGTTGCGGCCAAATTTCAATTACCA
AGATTCCCCATCGATTGAAACTTTGCTTACAACCAGACCTTTATAGGGCT
GGACATTGGTGATTATTGTGATGGCCTTATTGATTCTGGTCTGTCACGGG
TCCCTCGAGTGGACGACGAAATCAGGAAGAGACCGATATATCAAGGAACT
CCTAAACGAATTTGGCTGTTCTAGAATCTGCCCGCTCCGTGTTAAAGCAA
ATGGCCATGGATCTTCGAGTTTGCAGTTCCGCCTCTCCATTGTTGTTCCA
TCCGGATCTGCATGTGGCCAGTCTAAATAGCTGATCAATTGGAACTTGGT
TGTAGACAAATGTGTGGGAATCGGGTCGATCGATGGCTGTTGCGGTGAAA
AAGTACGCGTTTCGGGGTCATGGGATGCCTGACGCGTGCGTGAGCCGAAG
CGGGTGGGCCTTATCCGAGATGTTGGAGTCCGTTAAATGATTCCCCATAA
GCACTGAGGTTCGCTGCGGTTGACAAAAATCATACCCCGCAGGCGTGCTA
TGCATCCGGAACCCGCACCGCAGTACTCACCATTAGCCTGTGCTCTAGAC
GCTCACCAAGTCCTCATCTTATAAGCCGCCCTGATCGTCACCCGGAAAAT
CACTTTCACCGACTCCTTTGGTCAGCTGATACATTACGGCGACCTCTCCG
CATGCCCGCCTAGATGAGCGTCAATCGAAAACAACTAACAGTTTCTGATG
AACGGATATCAGGCAAATGGACAACAGCAGCCCGCCAGACTACAAAGCGC
TCTTTTTGAGAGCTGAGGAGGAACGCCAGCGGGAAGCAGAGCTTAGGAAA
CAAGCAGAGGAACGCCAACGGCTAGCAGAGCAGGAAAGGGACCAGGGAAG
AGAGCAAACACGGCAAACAACCTTTGCTGAGCTTATTCGTTTCTGTCACG
TCTACTTTTCTCGATCTCTGCGAGCTGAAAGTCCGTCTCGTTCTACAACA
GGGAAGATACCAGCACCTACTGGGAAACGCTGTCCGCTGCAGCTTCTGCA
CTGGACTAACTGTGCAGCCGAGCAGCTAAAGGTCTATCGCTCTGTTTGCG
CCTATCTTGCACCGTCCGGTCGGCCTGCCGCACGTTTATTCTCGCCTCGC
CTTGCACTAGAGGACTTGGGGCAACGATTCAGCAAGAGGGCAATAAGCAG
TGAGCAGGATCTGGAGAGCTACGAGCGGTTCGGCGTGGAGGATTATGTTC
GTGATATCATCACGGAGCTCTGCAAGATACCTGCTGCTCGAGAGGAATTT
TGCTTGGGCGATGCAATCCAGTTCGACAACCACGCTAACGCCCTCGATGC
AGTTGACGCCGACCAGTCACAAACGGATAAACCGTCAAGTTCCCGACGCT
CCCGACCAGATCAATATTGTATACACCGTATCGATGGCAATTATAATACG
ATTATTATGACAGTTGAGTACAAGCCGCCCCATAAACTATCCGTGGAGAA
TCTTCGAGCGGGTTTGCGACCAATGCTGTTCTGGAATGAGGTGGTCAGAC
CGGACTCCGTTCCCACAGAGGGGCCTGAAAAACTGAAATATAATGCAGCC
TGGCTAACCGGCTCGGCTCTGGTTCAGGAGTATCATGTCATGCTCCAGGA
AGGACTTGAGTACTCATATCTGACTAATGGATTCGCAATCGTTTTGCTGC
GGGTCCCCTATGATAATCCGGGTATCTTATACTACCATCTCTGTGAACCC
AACATGGAAGTTAATCCGGATGATGAACTGAGTTCTCCACAACAGCCGCT
AACAGCTGTTGCTCGGGTATTGTGCTTATGCCTTATGAGTTTCCGCTCAC
AATATCGTGACCAGGAGTGGCGGAATGCCACAAAGAATCTGCCAGAATGG
AAGACAAGTTTCGATCATACACGTTCCCAGATCCCGGAATCGGAATTGCA
AAAAAACCCGCCCGATTCAGAATATACAGTATCAGAGTATATGAGCTCCG
AACCTACTACATCAGAATATATACCGTCTTCGTCTCCTGCTCCACCCCCT
GCCGACGCCCGTCGAATAGCCACCCGGTCTCGAGTTAGCTGCGCGTCGCC
GAATCTGACTCCACGTGATGATTCTGATTCTGACGCAGATCAAGCTCCAG
GAGGAAGGAAGCGTGGTTTCAGTCAGGTTCCATCATCTCCTTCGTCTCCA
TCTGCTCAACGATCAACACGTCTGGTGGGATCTCGATATACCCAAAGCAG
TGGACAAGGTCAGCAGCACACCGCACAGTTTTGCACCCAGAAATGTCTAC
GGAGCCTGCAACATGGTGGTCAGCTGGATGATAATTGCCCAAATGTCATG
CTCCACCGACAGGGAGGGAACAGCAGCCAACACCTCATCAATGCCAAAAC
GCTGATCAAGCAACTCAAGCAGCAACTAGATGAAAATATCGACCGAGACT
GCACACCTCTAGGGGGTTGTGGCGCATCGGGAGTCCCATTTAAAGTCACC
TGTGCGGCGTATGGATATACTATGGTCGGTAAAGGAACGACTTCCCGACG
GTGGGAGGAGGTTAAACGTGAGGAAGTCGTATACCACATACTCAACAAAG
CACAGGCTTCTGCTGTTCCTGTTTTTCTGGGGGCAATCGATTTGGTCAAA
TTCTACTTCGTACATGGAGCTGGCGAGATCTGCCACATGCTCATAATGGC
CTGGGGGGGTGAGCCTATACCTGAGATTGAGCGTGATAAGAGGACACGTG
AGATTACGAGGTCTGTGAAGGAGATCCGTTCTCTGGGAGTCTTGCACCAG
GACCTCCGGCTGGCCAATATTCTGTGGAACGCTGAGCTGGGACGGGCCCT
GATCATTGACTTTCACTACGCGGAACTAAATCACCAACCGATGAAGAGGC
GGACAGAGTCGCGTGGGAAGCGTCCCTATAGAGGAGAATTGCATAGGCGA
AAACGACTTTGTATTGTCTAAATCTTAATGTCAATCTTCTCGAATCTTTT
CCTCTACTCCTGAAGGTCACCACTGAATGAATGGTAAAAGAAGAGCAGGC
GACGTTAAGCAATATCTTCTATCAAGGTTCCATGATTTCTTACTTTTCTT
TCTTCTGGTTGTACCATTTAGCACATGTCAGCACCTTGAGCATAACTTCA
GTTATTTTCACTTGCAATATGATGTTTGTTTGCAGGTAGTATGTCAATGG
CGATTTGCTAGCGGATGCTGTCAAAAACAATTCCTCTCTCTCGTGTCCGT
CTGGTCACAAGTGTCGAACCAAGACAATAAAG back to topCoding sequence (CDS) from alignment at ch3:5219422..5222803+ >KJC3_013062-T2 ID=KJC3_013062-T2|Name=KJC3_013062-T2|organism=Aspergillus niger KJC3|type=CDS|length=3006bp|location=Sequence derived from alignment at ch3:5219422..5222803+ (Aspergillus niger KJC3)
ATGGACAACAGCAGCCCGCCAGACTACAAAGCGCTCTTTTTGAGAGCTGA
GGAGGAACGCCAGCGGGAAGCAGAGCTTAGGAAACAAGCAGAGGAACGCC
AACGGCTAGCAGAGCAGGAAAGGGACCAGGGAAGAGAGCAAACACGGCAA
ACAACCTTTGCTGAGCTTATTCGTTTCTGTCACGTCTACTTTTCTCGATC
TCTGCGAGCTGAAAGTCCGTCTCGTTCTACAACAGGGAAGATACCAGCAC
CTACTGGGAAACGCTGTCCGCTGCAGCTTCTGCACTGGACTAACTGTGCA
GCCGAGCAGCTAAAGGTCTATCGCTCTGTTTGCGCCTATCTTGCACCGTC
CGGTCGGCCTGCCGCACGTTTATTCTCGCCTCGCCTTGCACTAGAGGACT
TGGGGCAACGATTCAGCAAGAGGGCAATAAGCAGTGAGCAGGATCTGGAG
AGCTACGAGCGGTTCGGCGTGGAGGATTATGTTCGTGATATCATCACGGA
GCTCTGCAAGATACCTGCTGCTCGAGAGGAATTTTGCTTGGGCGATGCAA
TCCAGTTCGACAACCACGCTAACGCCCTCGATGCAGTTGACGCCGACCAG
TCACAAACGGATAAACCGTCAAGTTCCCGACGCTCCCGACCAGATCAATA
TTGTATACACCGTATCGATGGCAATTATAATACGATTATTATGACAGTTG
AGTACAAGCCGCCCCATAAACTATCCGTGGAGAATCTTCGAGCGGGTTTG
CGACCAATGCTGTTCTGGAATGAGGTGGTCAGACCGGACTCCGTTCCCAC
AGAGGGGCCTGAAAAACTGAAATATAATGCAGCCTGGCTAACCGGCTCGG
CTCTGGTTCAGGAGTATCATGTCATGCTCCAGGAAGGACTTGAGTACTCA
TATCTGACTAATGGATTCGCAATCGTTTTGCTGCGGGTCCCCTATGATAA
TCCGGGTATCTTATACTACCATCTCTGTGAACCCAACATGGAAGTTAATC
CGGATGATGAACTGAGTTCTCCACAACAGCCGCTAACAGCTGTTGCTCGG
GTATTGTGCTTATGCCTTATGAGTTTCCGCTCACAATATCGTGACCAGGA
GTGGCGGAATGCCACAAAGAATCTGCCAGAATGGAAGACAAGTTTCGATC
ATACACGTTCCCAGATCCCGGAATCGGAATTGCAAAAAAACCCGCCCGAT
TCAGAATATACAGTATCAGAGTATATGAGCTCCGAACCTACTACATCAGA
ATATATACCGTCTTCGTCTCCTGCTCCACCCCCTGCCGACGCCCGTCGAA
TAGCCACCCGGTCTCGAGTTAGCTGCGCGTCGCCGAATCTGACTCCACGT
GATGATTCTGATTCTGACGCAGATCAAGCTCCAGGAGGAAGGAAGCGTGG
TTTCAGTCAGGTTCCATCATCTCCTTCGTCTCCATCTGCTCAACGATCAA
CACGTCTGGTGGGATCTCGATATACCCAAAGCAGTGGACAAGCAACTAGA
TGAATGGACAACAGCAGCCCGCCAGACTACAAAGCGCTCTTTTTGAGAGC
TGAGGAGGAACGCCAGCGGGAAGCAGAGCTTAGGAAACAAGCAGAGGAAC
GCCAACGGCTAGCAGAGCAGGAAAGGGACCAGGGAAGAGAGCAAACACGG
CAAACAACCTTTGCTGAGCTTATTCGTTTCTGTCACGTCTACTTTTCTCG
ATCTCTGCGAGCTGAAAGTCCGTCTCGTTCTACAACAGGGAAGATACCAG
CACCTACTGGGAAACGCTGTCCGCTGCAGCTTCTGCACTGGACTAACTGT
GCAGCCGAGCAGCTAAAGGTCTATCGCTCTGTTTGCGCCTATCTTGCACC
GTCCGGTCGGCCTGCCGCACGTTTATTCTCGCCTCGCCTTGCACTAGAGG
ACTTGGGGCAACGATTCAGCAAGAGGGCAATAAGCAGTGAGCAGGATCTG
GAGAGCTACGAGCGGTTCGGCGTGGAGGATTATGTTCGTGATATCATCAC
GGAGCTCTGCAAGATACCTGCTGCTCGAGAGGAATTTTGCTTGGGCGATG
CAATCCAGTTCGACAACCACGCTAACGCCCTCGATGCAGTTGACGCCGAC
CAGTCACAAACGGATAAACCGTCAAGTTCCCGACGCTCCCGACCAGATCA
ATATTGTATACACCGTATCGATGGCAATTATAATACGATTATTATGACAG
TTGAGTACAAGCCGCCCCATAAACTATCCGTGGAGAATCTTCGAGCGGGT
TTGCGACCAATGCTGTTCTGGAATGAGGTGGTCAGACCGGACTCCGTTCC
CACAGAGGGGCCTGAAAAACTGAAATATAATGCAGCCTGGCTAACCGGCT
CGGCTCTGGTTCAGGAGTATCATGTCATGCTCCAGGAAGGACTTGAGTAC
TCATATCTGACTAATGGATTCGCAATCGTTTTGCTGCGGGTCCCCTATGA
TAATCCGGGTATCTTATACTACCATCTCTGTGAACCCAACATGGAAGTTA
ATCCGGATGATGAACTGAGTTCTCCACAACAGCCGCTAACAGCTGTTGCT
CGGGTATTGTGCTTATGCCTTATGAGTTTCCGCTCACAATATCGTGACCA
GGAGTGGCGGAATGCCACAAAGAATCTGCCAGAATGGAAGACAAGTTTCG
ATCATACACGTTCCCAGATCCCGGAATCGGAATTGCAAAAAAACCCGCCC
GATTCAGAATATACAGTATCAGAGTATATGAGCTCCGAACCTACTACATC
AGAATATATACCGTCTTCGTCTCCTGCTCCACCCCCTGCCGACGCCCGTC
GAATAGCCACCCGGTCTCGAGTTAGCTGCGCGTCGCCGAATCTGACTCCA
CGTGATGATTCTGATTCTGACGCAGATCAAGCTCCAGGAGGAAGGAAGCG
TGGTTTCAGTCAGGTTCCATCATCTCCTTCGTCTCCATCTGCTCAACGAT
CAACACGTCTGGTGGGATCTCGATATACCCAAAGCAGTGGACAAGCAACT
AGATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013062-T2.utr5p1 | KJC3_013062-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013062-T2.utr3p1 | KJC3_013062-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5219422..5222803 + |
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