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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch3:5251647..5255459- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013064-T1 ID=KJC3_013064-T1|Name=KJC3_013064-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3813bp|location=Sequence derived from alignment at ch3:5251647..5255459- (Aspergillus niger KJC3)
TTTAATAAAATTAATATTAGTTTATCTGGATAAAGAATTAACTGCCTGGT
AAATTAGATATTATTAATAATAAATAAAATAAGATTAATTAGTAGGAGAA
TTTCCATTTGGGCCGCCGCCGCCGTTTCCGGCCGCGCCCCCGTTCGGGTT
TAGCCCTCGTCGCCGCCCCGCCGCATCCGGTTTAGCGCGTCCCGATGCGG
TTTGGTGGCCCGCGCTATGCCCGAGAAGGTACTGCCGCCGTCCACCGCCC
CGTCTTCTGACCCTCCGGACTATATAAGGATCGGGTGCGTCGCTCGACGA
CAACTGCTCGTTCTTCCCCTCACGGCACTGCCCCTGTTTCGCCCGTCCTG
CACGATGGAACGGTCATCTCCGACCTCCCGGCTGAACTGCACAGCCTTTC
CAGCCCGGGCTGAAAATTCGGACCATCACACGACCTGCCGTCTCCACTGA
TGGGCATGAATGCAGTTCCCTGATTCGCTGTTGTGAGCTGTAGACTCGTC
TTCTGGCGCTCAGCGCGCGCGCTATTTGTGTTGGGTATGGGCATTCTAGG
CTTGGAGGCGAGAAACGTTGCTGCCTAAAGGATGGAGGAGGTGGAGGAGG
AGGAGAAGGTTTCATCCACCTGGCGGAATCAATTCCACCAGGCTGTATAC
ACCGCGACGACGACCCTGGGCGATTCTTTCGTTCCCTGTGAACTTCCAAG
GTCGGCTGACGGAGGACGGCCTGGGGGGAAGAAGCCCCCATCCCACCTCA
AGGCCTAGATTCCCTCTAGCGTGCCATTCGGGTGGCCGTTCCAGGATCTC
ATGATGCGCCTCGACAAGGCCGTCTTATCAAGGCCAATCAAAAAAATGCC
TCAATTGCTCCTGCCCATCCCGACTTTGCCTCGTACGGTGACGGAAGCAC
ACAAGAGGGGGGCCTCCTTTCTGCTGATCATTCCCCTCCAACGGACAACC
GATCAATGTCCGACGGCGATGACACGTCCAACTTCACCGTCACTGCCTCG
ACAGCATCTACTGGTTGATACCACACGGCACAGCCCCGACGGTGGGTCAC
TGGGTTCCCAAACTGGGAGTTCCGTGCGGCCTGCATTCCCTGAGGTGTTT
TTCGACGGGCTTATTGGCGGCAAGGAGCCCAACATTCGTTCGGATCTGCT
GGGCTAATTGGGACTGCATCAGAGTCGGAGAGGCCATCTACGAGTTTCCG
GGCTGTTCCGCTGGTCGCCTGGCCGTCTCAAATCTTGAAGGTTGGATGCT
GAACTGCTATGCTATAAAGCTGGCCTTGTCCGTGTCTGCGCAGAAAGCTG
TGTGAGCCATTGTCTTTTTCTAACCACTTCAGTCTTTAAAAATCTCCCGG
TTCCATCTTCCCATCCCTCCACGATGACCCAGCCAGCACCACGAAGGGCT
CTGGTGGATCTGGACAATATCGAGTTCTACCGGCCGCAGCCCTCGAAATC
ACTGCAGCCGGAGCCCACTCTTTCTGTCCAGCCTATAAGCCCATGCCTTT
CTTTCCTCCCAGGTACGGCTGCCGGCACCACCCTCCCTCGCGGCGATGGT
ATTCCCCTTTTTGACCGTCCTCGTGAGAGGGACTCTCCATGCAGCCCTGC
GCGGCTGAATTCATTTGATGTCGAGTTGTCCAAGTTCGCGAAGGCAGCAT
CACAGATGACATTTTCAGCCATGGACAGCCAGCGCACGCACGGAGAAACC
AGCAGCGAGGCTTTTGATACCTCCACATTCTGTGAGTCAGCGCTTTTAGG
GTCGGTAATTCGCTTTATGTCATTTGACTTACGTTCAGCCTGCAGCCCTA
ACTTCGTGTCTCTCCAGCCCCAGACAAAGGACCGATTCCCCTGGCCCCTT
CGGAAGGACAACGGCGCGTGAAAGGAGTGAAATCCCTACCGGTCTTAATG
GTCGTTTGTGCACACCATCTCCGGACCTACAGGAGCAGGGTCATTCCTTA
GGTAAGGGCGTCCCATACGCACACCTGTTTTGTGCAACGATCTGATTTGT
TTTCGCAGACATACAGCCTTGCACCTCTGACGAGTCTAGCGTAATCGATC
GGAGCTGTTCGAGTGCCCCAAACGACAATCATGACATGAATTTTTGCAGC
ACCCCATCACGCCATGTGCCTTACAATGAGAGCACTGACAAGCCTATTGG
GGAACAAGAAAATAATCAGAACGTTTTGGGCGATGTCCCGCAGCAGTTGA
AACAGCACGTGCCAAGACCAGCTGTCAGTGACGGGGAACTACTTCCGAAC
GATCAACGATCGCCTTCAATTGCGGTGATTGAATCCAGCGCAGAGGACCA
ACTCTGTTTAGAGTCAGATCAGTCTCATTCGGCGGGGTCCGAGGAAGCAT
TCAATCGAAAATTAGCAGAAGTTGCTCTTAATCTAGATCTTCCATCCGCG
ATCATAAAGCCGCCTCGGCGAAAGGCCTTTGAAGTTGCCCAGACACGAAT
CGTGGAACAAAAACACCAGCGACCCCGTGACTGCCAACCGGGCCTTGATG
CTATACCTGCCCGCCGTCCCAACTGCTCCGACACGGAAGAGAGCCCGCGT
CTTGCTAAGAGACGCAAGCGTGCAATTAGGCCTGCGAAGAAAGTGGCCAA
CCATGCATCTTCCAGACGTTCAGGGAACCCGCTACGTGGCACAGCATCTG
CGCGGTCTGCAGAGCCTTGCAACAGCCAAGATATCTTTGGGCATGCCATC
CTCACTATCGAAACCCGCGCGTCCGGAACCTCGTACTTCTTCTCTTTCGA
GCCAAATTCCCTAAATAAACCCGAGGCACCGCCATTTCGGTTCTCCCTTG
ACGAGGAGCCGCATCGTCTTGCAGACGCTTCGTCCACCCAAGGGCCCAGA
AACGTTGGAAGGTCTAGGGAGAGTAGGCCTTCCTCCAGGAATCATATTCC
CCCTAAGGTCCCATGCAACACCATCGACGAGCGAGAATGGGAAGTGGAAC
GTATCTCAGCTTCACGAATATCTAGAGGAAAGCTACAATATCAGGTTCAG
TGGAAAGGATGTGATCCTGATCTCACCTGGTATCCAGCACGCGGATTTAA
GGGCGCTCCGTATAAGATCCAGAATTTTCATGGAATGTTCTCAGATCAAC
CTGGCCCCCCCAGGAGGTTGGCAGAATGGCTGGAAGCTTGGGAGGCAGGG
CAAGAACTTGACGATGTCCCAGATGATGACCTGCCAGAGTGACTGGAACC
ATCAAATACTACGAACAGCAGTCCATGCTATCCAGCAGATCATAACACCA
ATATTCGGTTGCCACGTCGCCGTATTGTCCCCAAGTACTACAGCAACGCG
TCTTCCCCAGCCGGACTCCCAAGGACGACGCGAAGTCCAATTTGCTATCT
GACAAAGGCTCAGTGATGGACGGAAAATTTGAATTGATCCTCCGAGCCAA
CAAGCTGCCGCTGCTGAGGACAGCCATAAGATCTGGGCCAAAATCCTTGT
TGATCCCGAAAATCCGGACGGAAACCAGGCTGCGGAGGATCTTCCTTGCA
TCCTTCAAGGAAACGGACTGAAACAGTCAAACGTTAGCATAGCCTCATCA
CTTTTGACTACTTGCCACCGTCGCTGTCCTGTCAACGTACTAGTCACTCA
GCTCGACTCAAAACGTACCTTGCAAAACTCGAAAGGAGGGATTCTGGGAT
AGCTATATGCAAATGAATATAATTGGAAGTCCAGTAGCTCTGCTTCTTTA
TGGCATAGTCTGATTGGGAATGCGCATGATTTGGTATGCCCTGCTTTTTA
AAACAGTCGGAGCTTCTGGGTATTACGGTAGTATAGTTGTAATCCGAGGA
CCTGTGAATGTCC back to topCoding sequence (CDS) from alignment at ch3:5251647..5255459- >KJC3_013064-T1 ID=KJC3_013064-T1|Name=KJC3_013064-T1|organism=Aspergillus niger KJC3|type=CDS|length=5094bp|location=Sequence derived from alignment at ch3:5251647..5255459- (Aspergillus niger KJC3)
ACATACAGCCTTGCACCTCTGACGAGTCTAGCGTAATCGATCGGAGCTGT
TCGAGTGCCCCAAACGACAATCATGACATGAATTTTTGCAGCACCCCATC
ACGCCATGTGCCTTACAATGAGAGCACTGACAAGCCTATTGGGGAACAAG
AAAATAATCAGAACGTTTTGGGCGATGTCCCGCAGCAGTTGAAACAGCAC
GTGCCAAGACCAGCTGTCAGTGACGGGGAACTACTTCCGAACGATCAACG
ATCGCCTTCAATTGCGGTGATTGAATCCAGCGCAGAGGACCAACTCTGTT
TAGAGTCAGATCAGTCTCATTCGGCGGGGTCCGAGGAAGCATTCAATCGA
AAATTAGCAGAAGTTGCTCTTAATCTAGATCTTCCATCCGCGATCATAAA
GCCGCCTCGGCGAAAGGCCTTTGAAGTTGCCCAGACACGAATCGTGGAAC
AAAAACACCAGCGACCCCGTGACTGCCAACCGGGCCTTGATGCTATACCT
GCCCGCCGTCCCAACTGCTCCGACACGGAAGAGAGCCCGCGTCTTGCTAA
GAGACGCAAGCGTGCAATTAGGCCTGCGAAGAAAGTGGCCAACCATGCAT
CTTCCAGACGTTCAGGGAACCCGCTACGTGGCACAGCATCTGCGCGGTCT
GCAGAGCCTTGCAACAGCCAAGATATCTTTGGGCATGCCATCCTCACTAT
CGAAACCCGCGCGTCCGGAACCTCGTACTTCTTCTCTTTCGAGCCAAATT
CCCTAAATAAACCCGAGGCACCGCCATTTCGGTTCTCCCTTGACGAGGAG
CCGCATCGTCTTGCAGACGCTTCGTCCACCCAAGGGCCCAGAAACGTTGG
AAGGTCTAGGGAGAGTAGGCCTTCCTCCAGGAATCATATTCCCCCTAAGG
TCCCATGCAACACCATCGACGAGCGAGAATGGGAAGTGGAACGTATCTCA
GCTTCACGAATATCTAGAGGAAAGCTACAATATCAGGTTCAGTGGAAAGG
ATGTGATCCTGATCTCACCTGGTATCCAGCACGCGGATTTAAGGGCGCTC
CGTATAAGATCCAGAATTTTCATGGAATGTTCTCAGATCAACCTGGCCCC
CCCAGGAGGTTGGCAGAATGGCTGGAAGCTTGGGAGGCAGGGCAAGAACT
TGACGATGTCCCAGATGATGACCTGCCAGAGTGACCCTAACTTCGTGTCT
CTCCAGCCCCAGACAAAGGACCGATTCCCCTGGCCCCTTCGGAAGGACAA
CGGCGCGTGAAAGGAGTGAAATCCCTACCGGTCTTAATGGTCGTTTGTGC
ACACCATCTCCGGACCTACAGGAGCAGGGTCATTCCTTAGATGACCCAGC
CAGCACCACGAAGGGCTCTGGTGGATCTGGACAATATCGAGTTCTACCGG
CCGCAGCCCTCGAAATCACTGCAGCCGGAGCCCACTCTTTCTGTCCAGCC
TATAAGCCCATGCCTTTCTTTCCTCCCAGGTACGGCTGCCGGCACCACCC
TCCCTCGCGGCGATGGTATTCCCCTTTTTGACCGTCCTCGTGAGAGGGAC
TCTCCATGCAGCCCTGCGCGGCTGAATTCATTTGATGTCGAGTTGTCCAA
GTTCGCGAAGGCAGCATCACAGATGACATTTTCAGCCATGGACAGCCAGC
GCACGCACGGAGAAACCAGCAGCGAGGCTTTTGATACCTCCACATTCTAC
ATACAGCCTTGCACCTCTGACGAGTCTAGCGTAATCGATCGGAGCTGTTC
GAGTGCCCCAAACGACAATCATGACATGAATTTTTGCAGCACCCCATCAC
GCCATGTGCCTTACAATGAGAGCACTGACAAGCCTATTGGGGAACAAGAA
AATAATCAGAACGTTTTGGGCGATGTCCCGCAGCAGTTGAAACAGCACGT
GCCAAGACCAGCTGTCAGTGACGGGGAACTACTTCCGAACGATCAACGAT
CGCCTTCAATTGCGGTGATTGAATCCAGCGCAGAGGACCAACTCTGTTTA
GAGTCAGATCAGTCTCATTCGGCGGGGTCCGAGGAAGCATTCAATCGAAA
ATTAGCAGAAGTTGCTCTTAATCTAGATCTTCCATCCGCGATCATAAAGC
CGCCTCGGCGAAAGGCCTTTGAAGTTGCCCAGACACGAATCGTGGAACAA
AAACACCAGCGACCCCGTGACTGCCAACCGGGCCTTGATGCTATACCTGC
CCGCCGTCCCAACTGCTCCGACACGGAAGAGAGCCCGCGTCTTGCTAAGA
GACGCAAGCGTGCAATTAGGCCTGCGAAGAAAGTGGCCAACCATGCATCT
TCCAGACGTTCAGGGAACCCGCTACGTGGCACAGCATCTGCGCGGTCTGC
AGAGCCTTGCAACAGCCAAGATATCTTTGGGCATGCCATCCTCACTATCG
AAACCCGCGCGTCCGGAACCTCGTACTTCTTCTCTTTCGAGCCAAATTCC
CTAAATAAACCCGAGGCACCGCCATTTCGGTTCTCCCTTGACGAGGAGCC
GCATCGTCTTGCAGACGCTTCGTCCACCCAAGGGCCCAGAAACGTTGGAA
GGTCTAGGGAGAGTAGGCCTTCCTCCAGGAATCATATTCCCCCTAAGGTC
CCATGCAACACCATCGACGAGCGAGAATGGGAAGTGGAACGTATCTCAGC
TTCACGAATATCTAGAGGAAAGCTACAATATCAGGTTCAGTGGAAAGGAT
GTGATCCTGATCTCACCTGGTATCCAGCACGCGGATTTAAGGGCGCTCCG
TATAAGATCCAGAATTTTCATGGAATGTTCTCAGATCAACCTGGCCCCCC
CAGGAGGTTGGCAGAATGGCTGGAAGCTTGGGAGGCAGGGCAAGAACTTG
ACGATGTCCCAGATGATGACCTGCCAGAGTGACCCTAACTTCGTGTCTCT
CCAGCCCCAGACAAAGGACCGATTCCCCTGGCCCCTTCGGAAGGACAACG
GCGCGTGAAAGGAGTGAAATCCCTACCGGTCTTAATGGTCGTTTGTGCAC
ACCATCTCCGGACCTACAGGAGCAGGGTCATTCCTTAGATGACCCAGCCA
GCACCACGAAGGGCTCTGGTGGATCTGGACAATATCGAGTTCTACCGGCC
GCAGCCCTCGAAATCACTGCAGCCGGAGCCCACTCTTTCTGTCCAGCCTA
TAAGCCCATGCCTTTCTTTCCTCCCAGGTACGGCTGCCGGCACCACCCTC
CCTCGCGGCGATGGTATTCCCCTTTTTGACCGTCCTCGTGAGAGGGACTC
TCCATGCAGCCCTGCGCGGCTGAATTCATTTGATGTCGAGTTGTCCAAGT
TCGCGAAGGCAGCATCACAGATGACATTTTCAGCCATGGACAGCCAGCGC
ACGCACGGAGAAACCAGCAGCGAGGCTTTTGATACCTCCACATTCTACAT
ACAGCCTTGCACCTCTGACGAGTCTAGCGTAATCGATCGGAGCTGTTCGA
GTGCCCCAAACGACAATCATGACATGAATTTTTGCAGCACCCCATCACGC
CATGTGCCTTACAATGAGAGCACTGACAAGCCTATTGGGGAACAAGAAAA
TAATCAGAACGTTTTGGGCGATGTCCCGCAGCAGTTGAAACAGCACGTGC
CAAGACCAGCTGTCAGTGACGGGGAACTACTTCCGAACGATCAACGATCG
CCTTCAATTGCGGTGATTGAATCCAGCGCAGAGGACCAACTCTGTTTAGA
GTCAGATCAGTCTCATTCGGCGGGGTCCGAGGAAGCATTCAATCGAAAAT
TAGCAGAAGTTGCTCTTAATCTAGATCTTCCATCCGCGATCATAAAGCCG
CCTCGGCGAAAGGCCTTTGAAGTTGCCCAGACACGAATCGTGGAACAAAA
ACACCAGCGACCCCGTGACTGCCAACCGGGCCTTGATGCTATACCTGCCC
GCCGTCCCAACTGCTCCGACACGGAAGAGAGCCCGCGTCTTGCTAAGAGA
CGCAAGCGTGCAATTAGGCCTGCGAAGAAAGTGGCCAACCATGCATCTTC
CAGACGTTCAGGGAACCCGCTACGTGGCACAGCATCTGCGCGGTCTGCAG
AGCCTTGCAACAGCCAAGATATCTTTGGGCATGCCATCCTCACTATCGAA
ACCCGCGCGTCCGGAACCTCGTACTTCTTCTCTTTCGAGCCAAATTCCCT
AAATAAACCCGAGGCACCGCCATTTCGGTTCTCCCTTGACGAGGAGCCGC
ATCGTCTTGCAGACGCTTCGTCCACCCAAGGGCCCAGAAACGTTGGAAGG
TCTAGGGAGAGTAGGCCTTCCTCCAGGAATCATATTCCCCCTAAGGTCCC
ATGCAACACCATCGACGAGCGAGAATGGGAAGTGGAACGTATCTCAGCTT
CACGAATATCTAGAGGAAAGCTACAATATCAGGTTCAGTGGAAAGGATGT
GATCCTGATCTCACCTGGTATCCAGCACGCGGATTTAAGGGCGCTCCGTA
TAAGATCCAGAATTTTCATGGAATGTTCTCAGATCAACCTGGCCCCCCCA
GGAGGTTGGCAGAATGGCTGGAAGCTTGGGAGGCAGGGCAAGAACTTGAC
GATGTCCCAGATGATGACCTGCCAGAGTGACCCTAACTTCGTGTCTCTCC
AGCCCCAGACAAAGGACCGATTCCCCTGGCCCCTTCGGAAGGACAACGGC
GCGTGAAAGGAGTGAAATCCCTACCGGTCTTAATGGTCGTTTGTGCACAC
CATCTCCGGACCTACAGGAGCAGGGTCATTCCTTAGATGACCCAGCCAGC
ACCACGAAGGGCTCTGGTGGATCTGGACAATATCGAGTTCTACCGGCCGC
AGCCCTCGAAATCACTGCAGCCGGAGCCCACTCTTTCTGTCCAGCCTATA
AGCCCATGCCTTTCTTTCCTCCCAGGTACGGCTGCCGGCACCACCCTCCC
TCGCGGCGATGGTATTCCCCTTTTTGACCGTCCTCGTGAGAGGGACTCTC
CATGCAGCCCTGCGCGGCTGAATTCATTTGATGTCGAGTTGTCCAAGTTC
GCGAAGGCAGCATCACAGATGACATTTTCAGCCATGGACAGCCAGCGCAC
GCACGGAGAAACCAGCAGCGAGGCTTTTGATACCTCCACATTCT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013064-T1.utr3p1 | KJC3_013064-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016197 |
| DBxref | InterPro:IPR023780 |
| DBxref | InterPro:IPR000953 |
| DBxref | PFAM:PF00385 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch3 | supercontig | ch3:5251647..5255459 - |
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