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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:1064595..1066975- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013066-T3 ID=KJC3_013066-T3|Name=KJC3_013066-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2381bp|location=Sequence derived from alignment at ch4:1064595..1066975- (Aspergillus niger KJC3)
AACTGGTAGTGATGTATGTTAACTATGTTAGTTGATGAGTTAGTTATGTA
TGCAAGGTTGAGTCAGTCGGGAGTCACCTGAACTGCAATGGAGATTTAGT
TGGATTGAATCGTTGGTGTGTGTGTGGCTTAACCTGTGTATGGTTGGTTC
ATTGTGTTCAGGTTCATGCAAGGTATGGGAGTCATGATGGTCTTGTGACT
TAACTAACTTGTTAACGTAAGCGGCAAGCGAGTCGGCCACGTAAGCGAGT
CGGCCACCCCATCGAAACTCGTCCACGCCTCCGAAAGCGATGCTATCCAA
ACAGCCATTACACCACCAAAAATGCCTAAATCATCAAAAGAGTTGGTGGA
ACAAGAGGGCAGGCTCTGTTTAGCAGTTGAATCTATTCAGAAAGATCATA
CAAAATCTATTCGTGAAGCTGCACGCGTTTTTCAAGTTCCCCGATCAACA
CTTCAAGATCGCCTAAATGGGCTCAAATTTCGCAAGGATACTAGAGCCAA
CTCACATAAATTGACCTCTATAGAGGAAGAATCACTTGAAAAATGGATTA
TATCGCTAGATCAACGTGGTGCACCACCAAAGCACTCTCAAGTCCGTGAA
ATGGCGAATCTACTACTTCAAAAGCGTGGTCAAAATACAACTATCTCTGT
CGGACAAAAATGGGTTACCAACTACATCTCAAGGCATGATTCCTTGAAAA
GTCGATATAGCCGTCAAATCAACTACAAACGAGCGAAGTGTGAAGAACCT
GAAGCTATTCAGATGTGGTTTAAACGCGTACAAACTGCTATATCAACATA
CGGCATTGTCGACGAAGATATCTATAACTTCGATGAAACTGGCTTTGCTA
TGGGTATCCTGGGTACTACTAAAGTAGTAACACGCTCAACATGTCAAGGA
AGACCCTTTCTTATACAGCCAGGGAATCGCGAATGGATAACTTCAATTGA
GTGTATCAACGCTGCTGGATGGATGCTACCAGCATATTTAGTGTTAAAAG
CAAAAACACATATTCAAGCTTGGTACGAAGGAAGTCTACCATCTTCCTGG
AGGATTGCTATATCCTCAAATGGATGGACTACACGAGAGATTGGGGAAGC
ATGGCTCAAAGATCACTTCATTCCATACATCAAAACACGAAGAACAGGTC
AATATAGCCTCCTCGTACTTGACGGGCATGATTCGCATCTAACACCTCAA
TTTGATGACATATGTTATCAAAATCAGATTATACCTGTCTGTATGCCTGC
TAATTCCTCACATCTATGTCAGCCTCTAGATGTTGCATGCTTTTCGCCTT
TGAAGAAGGCCTACAAAGATCAAGTTCAACAGCTTATCCGTACGGGATAT
CATCATATCGAGAAGGTTGATTTTCTTGACATGTATCCGAAAGCCCATGC
TCAAGCGTTTACTAAAGCAAATATACAAAGCGCTTTTAGAGCTTCAGGTC
TTGTTCCTCTAGATCCCAGCAAGATACTAGAGAATATGATTTTCAAGGAG
ACCAGCCGTCCGAGCAGTCAAAGCACCTCCTCTTCTTCGATCTTTACAAA
AACACCAAGGAATTCGAGGCAATTCAAGAAGTACGAGTCTACACTATCTC
AATTACTTCAACAACAAGATACTCCAGCTACACCAATACAGTCAGCCTTA
TCGTACATCTTCAAAGGCGCGGAGGTTGCTTTGAATCATACAGTACTACT
TGAGCATGAAAATCGCCAACTACGTGAAGCTCTTGACAAACGAAACACCA
AGCAGAAACGCAATCAACATCAAATGGATGGTTTGAATGGCCTCACTGTA
CAAGAAGCGCTTGAGGCTTTCAACCATGCTAGAATATTGGAAGAACAGGC
TGGGGATGCAGGTCCTAGGGAGGATCAACCACGCCGTCGGGCGCCTCCTA
GGTGTAGCGCGTGCCATATTGTAGGGCATATACGTACTAGATGTCCTAAT
CGAGCAGTATCTTGAGATAGAGCGCTTTTAAGCGTTGAATTAGGTGTTCA
AAAAGCATCATTTTGTATGTAAATCAGAATGATGATATACTACTAGCGGA
GGTGGCCGACTCGCTTACGTGGCCGACTCGCTTGCCGCTTACGTTAACTA
ACGTTAGTCACTGGGTGTTTCTGACTCAGGCAGAGGTGTAGGTAACTAGT
TAGCTGAAGCTGGAGGGTTCGGGGTCGGGGACGGACATGGGAATGAGGAC
GGGGACGGGTTCCCGATTGTTGATTTACTCGCTTACTTACTTGCTTACTT
AATGTTACTGGGTGTAGTAGCTAGATATTACCAAATAGGTATAGTCCTGG
CTAAGTGGTATAGTGTAATAGATATGCATGGAAGTGGGCTGGGTTTCAGC
GAGCGTGTTTCGGGATGATGCATAGTTGGTG back to topCoding sequence (CDS) from alignment at ch4:1064595..1066975- >KJC3_013066-T3 ID=KJC3_013066-T3|Name=KJC3_013066-T3|organism=Aspergillus niger KJC3|type=CDS|length=1644bp|location=Sequence derived from alignment at ch4:1064595..1066975- (Aspergillus niger KJC3)
ATGCCTAAATCATCAAAAGAGTTGGTGGAACAAGAGGGCAGGCTCTGTTT
AGCAGTTGAATCTATTCAGAAAGATCATACAAAATCTATTCGTGAAGCTG
CACGCGTTTTTCAAGTTCCCCGATCAACACTTCAAGATCGCCTAAATGGG
CTCAAATTTCGCAAGGATACTAGAGCCAACTCACATAAATTGACCTCTAT
AGAGGAAGAATCACTTGAAAAATGGATTATATCGCTAGATCAACGTGGTG
CACCACCAAAGCACTCTCAAGTCCGTGAAATGGCGAATCTACTACTTCAA
AAGCGTGGTCAAAATACAACTATCTCTGTCGGACAAAAATGGGTTACCAA
CTACATCTCAAGGCATGATTCCTTGAAAAGTCGATATAGCCGTCAAATCA
ACTACAAACGAGCGAAGTGTGAAGAACCTGAAGCTATTCAGATGTGGTTT
AAACGCGTACAAACTGCTATATCAACATACGGCATTGTCGACGAAGATAT
CTATAACTTCGATGAAACTGGCTTTGCTATGGGTATCCTGGGTACTACTA
AAGTAGTAACACGCTCAACATGTCAAGGAAGACCCTTTCTTATACAGCCA
GGGAATCGCGAATGGATAACTTCAATTGAGTGTATCAACGCTGCTGGATG
GATGCTACCAGCATATTTAGTGTTAAAAGCAAAAACACATATTCAAGCTT
GGTACGAAGGAAGTCTACCATCTTCCTGGAGGATTGCTATATCCTCAAAT
GGATGGACTACACGAGAGATTGGGGAAGCATGGCTCAAAGATCACTTCAT
TCCATACATCAAAACACGAAGAACAGGTCAATATAGCCTCCTCGTACTTG
ACGGGCATGATTCGCATCTAACACCTCAATTTGATGACATATGTTATCAA
AATCAGATTATACCTGTCTGTATGCCTGCTAATTCCTCACATCTATGTCA
GCCTCTAGATGTTGCATGCTTTTCGCCTTTGAAGAAGGCCTACAAAGATC
AAGTTCAACAGCTTATCCGTACGGGATATCATCATATCGAGAAGGTTGAT
TTTCTTGACATGTATCCGAAAGCCCATGCTCAAGCGTTTACTAAAGCAAA
TATACAAAGCGCTTTTAGAGCTTCAGGTCTTGTTCCTCTAGATCCCAGCA
AGATACTAGAGAATATGATTTTCAAGGAGACCAGCCGTCCGAGCAGTCAA
AGCACCTCCTCTTCTTCGATCTTTACAAAAACACCAAGGAATTCGAGGCA
ATTCAAGAAGTACGAGTCTACACTATCTCAATTACTTCAACAACAAGATA
CTCCAGCTACACCAATACAGTCAGCCTTATCGTACATCTTCAAAGGCGCG
GAGGTTGCTTTGAATCATACAGTACTACTTGAGCATGAAAATCGCCAACT
ACGTGAAGCTCTTGACAAACGAAACACCAAGCAGAAACGCAATCAACATC
AAATGGATGGTTTGAATGGCCTCACTGTACAAGAAGCGCTTGAGGCTTTC
AACCATGCTAGAATATTGGAAGAACAGGCTGGGGATGCAGGTCCTAGGGA
GGATCAACCACGCCGTCGGGCGCCTCCTAGGTGTAGCGCGTGCCATATTG
TAGGGCATATACGTACTAGATGTCCTAATCGAGCAGTATCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013066-T3.utr3p1 | KJC3_013066-T3.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR004875 |
| DBxref | InterPro:IPR007889 |
| DBxref | InterPro:IPR006600 |
| DBxref | PFAM:PF03221 |
| DBxref | PFAM:PF05225 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:1064595..1066975 - |
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