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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:2568738..2569880+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013067-T1 ID=KJC3_013067-T1|Name=KJC3_013067-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1143bp|location=Sequence derived from alignment at ch4:2568738..2569880+ (Aspergillus niger KJC3)
TACCTACCCATTTCCAGATACCTCACTATACAAATGCCTCTTCCTCTGAT
CCAGAGGCAACCGGAATTATGACAACAACTCGCAACATCCCGTAATTAAT
TCTTTAATGCTCTCGCCGTTTTGTTGTTACGCGTGCACGCCTACCCACGT
ACTTCGCAGGGCAGATCCCATATACAAGGCTCTATGTTTCCTAAATTCTT
GCTCCGGCCATCTTTCTTCCGTGATAAACAGCGAAGCGTGAGGTCCAGGG
TGTCATCTTCGGAAGCAGGACCCGGACAATCTGTGAAGCCAAGTGATGCC
AATTATCTGGAGGGCCATATCTCATGTATCCGCTGTTCATGCTGTGCAGC
AGATATATGCCTGACGTCGCAGATAATCAGCAAAGGGTTCACGGGTCGCT
ACGGCCGTGCCTATCTTGTGTCCGGCGAGCCTTCGCTCGCCCGAAAAGCT
TCACCTACTGATACACTTTTAAACACGGTGATACAGCAGCCCGTGCCACG
GAGACTGGTCACTGGTGCGCACACAGTAGGCGACATTAACTGTTCCGTTT
GCGGAAATGTGCTCGGCTGGAAATATATCGCTGCCGAAGAAGAGTCACAA
CGTTACAAAATCGGCAAGTTCATCTTGGAGACCGAAAGGGTTATGATATC
TTCTTTTTGGGAATCATCCGACGTTGTTGAATCAACATTACTGCCCGCAT
ATCCCGGTTCTACTGAGGTTGGACATGGCCAACCTCCTAACAGTATAGAA
TTTGATAGCCAGAACGAAGATGAATGCGAGGACTTATTCTCTGGAATCTG
GACCCCTGGGTTGGCCGTACGCCGAAGAAATCGCAAACTGCCTGAACGCC
GATCTTCTCTATTCGGAATCACAGCCCTGTGATAATGTTTTATGCTCTTG
CGTCTAATGAAACTTCATGAGATCATGTTCGATGAAATATCACTCAACGG
CCCGCATCTTCGGATTGAGTTCAGAATGGGCAAGGTAGCGTTGTTTATAT
GAAACCGCCTTGCCTTGTGCACCAGACGGCTCTAATTCCTTAATCTTTTC
ACCTTTCCTTCTTTATGAATATGTTGGGAGTTACATTCATCGGTAATGTT
TATAATATGTGGTATCACAATAGATTTCACAGACAAATTGGTG back to topCoding sequence (CDS) from alignment at ch4:2568738..2569880+ >KJC3_013067-T1 ID=KJC3_013067-T1|Name=KJC3_013067-T1|organism=Aspergillus niger KJC3|type=CDS|length=699bp|location=Sequence derived from alignment at ch4:2568738..2569880+ (Aspergillus niger KJC3)
ATGTTTCCTAAATTCTTGCTCCGGCCATCTTTCTTCCGTGATAAACAGCG
AAGCGTGAGGTCCAGGGTGTCATCTTCGGAAGCAGGACCCGGACAATCTG
TGAAGCCAAGTGATGCCAATTATCTGGAGGGCCATATCTCATGTATCCGC
TGTTCATGCTGTGCAGCAGATATATGCCTGACGTCGCAGATAATCAGCAA
AGGGTTCACGGGTCGCTACGGCCGTGCCTATCTTGTGTCCGGCGAGCCTT
CGCTCGCCCGAAAAGCTTCACCTACTGATACACTTTTAAACACGGTGATA
CAGCAGCCCGTGCCACGGAGACTGGTCACTGGTGCGCACACAGTAGGCGA
CATTAACTGTTCCGTTTGCGGAAATGTGCTCGGCTGGAAATATATCGCTG
CCGAAGAAGAGTCACAACGTTACAAAATCGGCAAGTTCATCTTGGAGACC
GAAAGGGTTATGATATCTTCTTTTTGGGAATCATCCGACGTTGTTGAATC
AACATTACTGCCCGCATATCCCGGTTCTACTGAGGTTGGACATGGCCAAC
CTCCTAACAGTATAGAATTTGATAGCCAGAACGAAGATGAATGCGAGGAC
TTATTCTCTGGAATCTGGACCCCTGGGTTGGCCGTACGCCGAAGAAATCG
CAAACTGCCTGAACGCCGATCTTCTCTATTCGGAATCACAGCCCTGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013067-T1.utr5p1 | KJC3_013067-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013067-T1.utr3p1 | KJC3_013067-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR034751 |
| DBxref | InterPro:IPR004910 |
| DBxref | PFAM:PF03226 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:2568738..2569880 + |
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