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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4328172..4331245+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013069-T1 ID=KJC3_013069-T1|Name=KJC3_013069-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3074bp|location=Sequence derived from alignment at ch4:4328172..4331245+ (Aspergillus niger KJC3)
CTCAGTTGCTCCTCCACTTCTGTCCCCGTCATTGGCATACTTCGATTGCT
TCTCATTCTCCCTTACCTCCGTCACTTTGTCCTCTCATTGAACTTTTCCT
CCGCTTTTCTCTCTTGTCTTTAATTCATTGTTCACCTTAGCTTGCAGGCT
CTGGTCTGTCAAGCTCACCCCATGTAAAAGTGCGGACCAGTCCCTCTTCC
TGGCCGCACCCACCCCCATGGTGCCCGCCCATCTCTGACCATTTGTCCGC
CTATTCCTTCAACGCGCCCTCTGTCGCTCCCTCAATCGCTCCATCTATTG
CCCCTTCGCAATCGTATACCCTTTCTGTCTACCTGTTGGATGGCATGGCG
GACTACCACGACGCCGGTGGGCTAATTCTCGACGGCCCCTTTGATCCCGA
CGCCCAGGCCACCGTCACGGACTATATTGACTACACGGAATACCTCCCCG
CTGACCTCATTCGCTCCCTAACTCTCATCCGCGGCCTTGATGAACGCTAC
TTGGAAGCTACACAAGGCGTTCATGATCTCACCAAGGCCTATGGCCAACT
GCCCACCCTCCCCTCGGACGTACGTCCTGACGCGCGTGCTCTGCGCAAAG
ATATCTCTGAACAACTTGATCGCGCCATCAACGCCCGTGAATCGGCCTAT
GCGGAAGCTTGCCGTCTCTACGATGTCATCGATCGCCACTTCAACCGGCT
AGACAGCATTAAGCAAAAGCTCGAAGCTCTCCCCAAGCCCGCGTCGCGCG
AACCTACTCCTCCTCCCGCGCCGCCCGTCACAACAACCAAAAGGAGCCGC
TCGACCAAGAAAACCGAGGAAGCTTCTGGCCCGCCCACCACGACGCGCAT
CACTTTGCGCTTGGATGGCCACGATACTGCTCGCGCGACAACTGTGCAGA
AGTCGCGCACACGCCGATCCCTCATCTCCGCCGAGCATCTGGCCGATTTG
CACCCCGATTCGCCTATTGCCAGCACAGAGCATTCAGATGTGGAGCCGGA
CAGCAAAATAACGCCCTCAGAGTCACCCCCGGAGCCGGCAGCAGCGCCCG
CCAAGAAGGAGAAGGGCCGTCGGCGATCGCGGACTTCTGGCTTGGTTTCG
ACCGGTGCTCAAGGCCCTTCTGCTCCAGCCATATCGACCAGCAATGCGTT
AGCGATGCTCAAGCCACCTCCTGACGATGCCAAACCTGGAAGCGAGGATA
TGCCATGGTTGCGTCTGACTGAGTGGGAAATGACGAAACTGCGGAAGAAG
ATGAAGAAGAATGCCGTTTGGCAACCCAGCGAGGTCATGATTCATCGCGA
GCTGGCCTTGCGCGGCCGCGGCTGGGAGGCTTACCGAGCGGCGAAAGCTC
AGGCTGAGGCCACTGGTGCTGAATTCTTGGACTGTGACGACATCATGAAC
ACGTACGTTCCGGGCAAGCTGACCAAACGCAGCGAAGCCACCGGCGACAC
TGAGGGCACATTCGAGACTAAGCTTAGCAACCGTGGCATGAAGCTGAATG
AGGCCAAGAAGCTTAAACGGGAGAACCAGGCCCGAGAGCAGGCGGCAGCT
GCAGCCGCAGCCGCCGCCGCCGCAGCAGCACAAGAACAAACAGCCAAAGA
TGGAGTCCAGCCAGGAGTGGCTCCCACTGATGTACCCACAGCTAGTGTCC
CAGAAGTTTCAGCTGTGAGCAAGCCCACTCGTGCAGGGAAAAAGAGGAAA
CTCGAAGAGGTGACACCCCCAGAGGTTCCCCCCATTCCTTCAGCTCCCGT
CCCCTCCACATCTTCTGCCCCCTCTGCTTCCGCTGCCCCCTCTACGTCTG
ATGGTCCCCCCACTGTTGAGCCCTCTGCACCCGACGGTCCCTCTCCTTCT
GCACCCTCTGTTCCTACTACTGCCACCTCCGCTGCTTCCCCTGTTCCTAC
TGCCCCCGCTGTCTCCGCTGCTCCTACCGCGCCTGTGGAAATTGAAACCC
GTCCTTCGCTGCGAAGCGCGACTAAACGCCGCCGAACTAGCAAAGGATCC
CCCACACCCGTTGATCCAAACATCGCCAATCCTGAATTATCTACAAAAGC
AGCACCAGCTCCTACAGCTGTAGAAACCTCCGAGTCGCAGAAGCCTTCCT
TACCGTCGTCTCCAACTGGATCCAAGCGCGCTATCGCACAACCTACGATC
TCAGCCGTAAAAGCGGCGACGCCAACCCCCCCGGTTACCCGCCCCCCCTC
TCGCCGCTCGGCTGCTCTATCATTAGAGCCAACCACCAATGCCAGCGTCG
TTGCACCTTCTACTAAACGCGAGCTCCGTCAGAAAAGCGCCACACCTGCT
CGGAAGACTCCTGTGCCAGAAACCGCTCGAGCTGCCAGTGTGAGTGCTCC
CAACCGCAGGCGTAAACGCCCCGCTCCAGGTCCTGTATCTTCAGGCCAAG
ACGGTGGTGCAGCGGTAAGCTACGGTCGCCGCAAAGCGAAGCCCGGGAAG
AAGCGGATTGGGACGCGTGAGGTTGGCCTGAAAGATGGAACCCTGGCACG
TGAGGACATTCGAATCGACGAGGATGGAGTACTGGAAGAGATCGACCCGA
ACGAACCACGGTATTGTCTATGTGGAGACGTGAGTTTCGGGACGATGATC
TGCTGTGAAAATCAAGAGGTATGTGTTCTATATTTCTGCGTTGTATGGCG
CCTCTAACATGAGTAGTGCGACCGAGAATGGTTTCATCTTGACTGTGTCG
GGCTGTCTGAGGTACCAAGTCGCACGGCGAAGTGGTACTGTCCGGATTGT
CGGGTTAAGTTTAACAAGGGTGCAGACGGAATTGTCAAGAACAATCCGCG
GAGATAAAGCTATACCATACTGACTGCACAAATTTTCTGATTCTGAGTGG
GTGGTGAATATTCATGAGACCACGATTAGGCGCTTGGGCAAATTGTTGCA
TAGGGCTTGATTTTGATCTCTGATTCGTTCTATTGATTGCAGCGTGGCGA
AGATTTCATGGAGTAAAACACCCTTTGTTGGCTAATTTCATTCATCATAA
GAGCTAATTCGGGTGATGGCGCTACACTGAGAGTATAACGCATTTAATAA
CTATTTGTCACACTCGTACGTGGA back to topCoding sequence (CDS) from alignment at ch4:4328172..4331245+ >KJC3_013069-T1 ID=KJC3_013069-T1|Name=KJC3_013069-T1|organism=Aspergillus niger KJC3|type=CDS|length=4830bp|location=Sequence derived from alignment at ch4:4328172..4331245+ (Aspergillus niger KJC3)
ATGGCGGACTACCACGACGCCGGTGGGCTAATTCTCGACGGCCCCTTTGA
TCCCGACGCCCAGGCCACCGTCACGGACTATATTGACTACACGGAATACC
TCCCCGCTGACCTCATTCGCTCCCTAACTCTCATCCGCGGCCTTGATGAA
CGCTACTTGGAAGCTACACAAGGCGTTCATGATCTCACCAAGGCCTATGG
CCAACTGCCCACCCTCCCCTCGGACGTACGTCCTGACGCGCGTGCTCTGC
GCAAAGATATCTCTGAACAACTTGATCGCGCCATCAACGCCCGTGAATCG
GCCTATGCGGAAGCTTGCCGTCTCTACGATGTCATCGATCGCCACTTCAA
CCGGCTAGACAGCATTAAGCAAAAGCTCGAAGCTCTCCCCAAGCCCGCGT
CGCGCGAACCTACTCCTCCTCCCGCGCCGCCCGTCACAACAACCAAAAGG
AGCCGCTCGACCAAGAAAACCGAGGAAGCTTCTGGCCCGCCCACCACGAC
GCGCATCACTTTGCGCTTGGATGGCCACGATACTGCTCGCGCGACAACTG
TGCAGAAGTCGCGCACACGCCGATCCCTCATCTCCGCCGAGCATCTGGCC
GATTTGCACCCCGATTCGCCTATTGCCAGCACAGAGCATTCAGATGTGGA
GCCGGACAGCAAAATAACGCCCTCAGAGTCACCCCCGGAGCCGGCAGCAG
CGCCCGCCAAGAAGGAGAAGGGCCGTCGGCGATCGCGGACTTCTGGCTTG
GTTTCGACCGGTGCTCAAGGCCCTTCTGCTCCAGCCATATCGACCAGCAA
TGCGTTAGCGATGCTCAAGCCACCTCCTGACGATGCCAAACCTGGAAGCG
AGGATATGCCATGGTTGCGTCTGACTGAGTGGGAAATGACGAAACTGCGG
AAGAAGATGAAGAAGAATGCCGTTTGGCAACCCAGCGAGGTCATGATTCA
TCGCGAGCTGGCCTTGCGCGGCCGCGGCTGGGAGGCTTACCGAGCGGCGA
AAGCTCAGGCTGAGGCCACTGGTGCTGAATTCTTGGACTGTGACGACATC
ATGAACACGTACGTTCCGGGCAAGCTGACCAAACGCAGCGAAGCCACCGG
CGACACTGAGGGCACATTCGAGACTAAGCTTAGCAACCGTGGCATGAAGC
TGAATGAGGCCAAGAAGCTTAAACGGGAGAACCAGGCCCGAGAGCAGGCG
GCAGCTGCAGCCGCAGCCGCCGCCGCCGCAGCAGCACAAGAACAAACAGC
CAAAGATGGAGTCCAGCCAGGAGTGGCTCCCACTGATGTACCCACAGCTA
GTGTCCCAGAAGTTTCAGCTGTGAGCAAGCCCACTCGTGCAGGGAAAAAG
AGGAAACTCGAAGAGGTGACACCCCCAGAGGTTCCCCCCATTCCTTCAGC
TCCCGTCCCCTCCACATCTTCTGCCCCCTCTGCTTCCGCTGCCCCCTCTA
CGTCTGATGGTCCCCCCACTGTTGAGCCCTCTGCACCCGACGGTCCCTCT
CCTTCTGCACCCTCTGTTCCTACTACTGCCACCTCCGCTGCTTCCCCTGT
TCCTACTGCCCCCGCTGTCTCCGCTGCTCCTACCGCGCCTGTGGAAATTG
AAACCCGTCCTTCGCTGCGAAGCGCGACTAAACGCCGCCGAACTAGCAAA
GGATCCCCCACACCCGTTGATCCAAACATCGCCAATCCTGAATTATCTAC
AAAAGCAGCACCAGCTCCTACAGCTGTAGAAACCTCCGAGTCGCAGAAGC
CTTCCTTACCGTCGTCTCCAACTGGATCCAAGCGCGCTATCGCACAACCT
ACGATCTCAGCCGTAAAAGCGGCGACGCCAACCCCCCCGGTTACCCGCCC
CCCCTCTCGCCGCTCGGCTGCTCTATCATTAGAGCCAACCACCAATGCCA
GCGTCGTTGCACCTTCTACTAAACGCGAGCTCCGTCAGAAAAGCGCCACA
CCTGCTCGGAAGACTCCTGTGCCAGAAACCGCTCGAGCTGCCAGTGTGAG
TGCTCCCAACCGCAGGCGTAAACGCCCCGCTCCAGGTCCTGTATCTTCAG
GCCAAGACGGTGGTGCAGCGGTAAGCTACGGTCGCCGCAAAGCGAAGCCC
GGGAAGAAGCGGATTGGGACGCGTGAGGTTGGCCTGAAAGATGGAACCCT
GGCACGTGAGGACATTCGAATCGACGAGGATGGAGTACTGGAAGAGATCG
ACCCGAACGAACCACGGTATTGTCTATGTGGAGACGTGAGTTTCGGGACG
ATGATCTGCTGTGAAAATCAAGAGTGCGACCGAGAATGGTTTCATCTTGA
CTGTGTCGGGCTGTCTGAGGTACCAAGTCGCACGGCGAAGTGGTACTGTC
CGGATTGTCGGGTTAAGTTTAACAAGGGTGCAGACGGAATTGTCAAGAAC
AATCCGCGGAGATAAATGGCGGACTACCACGACGCCGGTGGGCTAATTCT
CGACGGCCCCTTTGATCCCGACGCCCAGGCCACCGTCACGGACTATATTG
ACTACACGGAATACCTCCCCGCTGACCTCATTCGCTCCCTAACTCTCATC
CGCGGCCTTGATGAACGCTACTTGGAAGCTACACAAGGCGTTCATGATCT
CACCAAGGCCTATGGCCAACTGCCCACCCTCCCCTCGGACGTACGTCCTG
ACGCGCGTGCTCTGCGCAAAGATATCTCTGAACAACTTGATCGCGCCATC
AACGCCCGTGAATCGGCCTATGCGGAAGCTTGCCGTCTCTACGATGTCAT
CGATCGCCACTTCAACCGGCTAGACAGCATTAAGCAAAAGCTCGAAGCTC
TCCCCAAGCCCGCGTCGCGCGAACCTACTCCTCCTCCCGCGCCGCCCGTC
ACAACAACCAAAAGGAGCCGCTCGACCAAGAAAACCGAGGAAGCTTCTGG
CCCGCCCACCACGACGCGCATCACTTTGCGCTTGGATGGCCACGATACTG
CTCGCGCGACAACTGTGCAGAAGTCGCGCACACGCCGATCCCTCATCTCC
GCCGAGCATCTGGCCGATTTGCACCCCGATTCGCCTATTGCCAGCACAGA
GCATTCAGATGTGGAGCCGGACAGCAAAATAACGCCCTCAGAGTCACCCC
CGGAGCCGGCAGCAGCGCCCGCCAAGAAGGAGAAGGGCCGTCGGCGATCG
CGGACTTCTGGCTTGGTTTCGACCGGTGCTCAAGGCCCTTCTGCTCCAGC
CATATCGACCAGCAATGCGTTAGCGATGCTCAAGCCACCTCCTGACGATG
CCAAACCTGGAAGCGAGGATATGCCATGGTTGCGTCTGACTGAGTGGGAA
ATGACGAAACTGCGGAAGAAGATGAAGAAGAATGCCGTTTGGCAACCCAG
CGAGGTCATGATTCATCGCGAGCTGGCCTTGCGCGGCCGCGGCTGGGAGG
CTTACCGAGCGGCGAAAGCTCAGGCTGAGGCCACTGGTGCTGAATTCTTG
GACTGTGACGACATCATGAACACGTACGTTCCGGGCAAGCTGACCAAACG
CAGCGAAGCCACCGGCGACACTGAGGGCACATTCGAGACTAAGCTTAGCA
ACCGTGGCATGAAGCTGAATGAGGCCAAGAAGCTTAAACGGGAGAACCAG
GCCCGAGAGCAGGCGGCAGCTGCAGCCGCAGCCGCCGCCGCCGCAGCAGC
ACAAGAACAAACAGCCAAAGATGGAGTCCAGCCAGGAGTGGCTCCCACTG
ATGTACCCACAGCTAGTGTCCCAGAAGTTTCAGCTGTGAGCAAGCCCACT
CGTGCAGGGAAAAAGAGGAAACTCGAAGAGGTGACACCCCCAGAGGTTCC
CCCCATTCCTTCAGCTCCCGTCCCCTCCACATCTTCTGCCCCCTCTGCTT
CCGCTGCCCCCTCTACGTCTGATGGTCCCCCCACTGTTGAGCCCTCTGCA
CCCGACGGTCCCTCTCCTTCTGCACCCTCTGTTCCTACTACTGCCACCTC
CGCTGCTTCCCCTGTTCCTACTGCCCCCGCTGTCTCCGCTGCTCCTACCG
CGCCTGTGGAAATTGAAACCCGTCCTTCGCTGCGAAGCGCGACTAAACGC
CGCCGAACTAGCAAAGGATCCCCCACACCCGTTGATCCAAACATCGCCAA
TCCTGAATTATCTACAAAAGCAGCACCAGCTCCTACAGCTGTAGAAACCT
CCGAGTCGCAGAAGCCTTCCTTACCGTCGTCTCCAACTGGATCCAAGCGC
GCTATCGCACAACCTACGATCTCAGCCGTAAAAGCGGCGACGCCAACCCC
CCCGGTTACCCGCCCCCCCTCTCGCCGCTCGGCTGCTCTATCATTAGAGC
CAACCACCAATGCCAGCGTCGTTGCACCTTCTACTAAACGCGAGCTCCGT
CAGAAAAGCGCCACACCTGCTCGGAAGACTCCTGTGCCAGAAACCGCTCG
AGCTGCCAGTGTGAGTGCTCCCAACCGCAGGCGTAAACGCCCCGCTCCAG
GTCCTGTATCTTCAGGCCAAGACGGTGGTGCAGCGGTAAGCTACGGTCGC
CGCAAAGCGAAGCCCGGGAAGAAGCGGATTGGGACGCGTGAGGTTGGCCT
GAAAGATGGAACCCTGGCACGTGAGGACATTCGAATCGACGAGGATGGAG
TACTGGAAGAGATCGACCCGAACGAACCACGGTATTGTCTATGTGGAGAC
GTGAGTTTCGGGACGATGATCTGCTGTGAAAATCAAGAGTGCGACCGAGA
ATGGTTTCATCTTGACTGTGTCGGGCTGTCTGAGGTACCAAGTCGCACGG
CGAAGTGGTACTGTCCGGATTGTCGGGTTAAGTTTAACAAGGGTGCAGAC
GGAATTGTCAAGAACAATCCGCGGAGATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013069-T1.utr5p1 | KJC3_013069-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013069-T1.utr3p1 | KJC3_013069-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011011 |
| DBxref | InterPro:IPR019787 |
| DBxref | InterPro:IPR019786 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR001965 |
| DBxref | InterPro:IPR024610 |
| DBxref | PFAM:PF12998 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4328172..4331245 + |
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