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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4328172..4331245+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013069-T3 ID=KJC3_013069-T3|Name=KJC3_013069-T3|organism=Aspergillus niger KJC3|type=mRNA|length=3074bp|location=Sequence derived from alignment at ch4:4328172..4331245+ (Aspergillus niger KJC3)
CTCAGTTGCTCCTCCACTTCTGTCCCCGTCATTGGCATACTTCGATTGCT
TCTCATTCTCCCTTACCTCCGTCACTTTGTCCTCTCATTGAACTTTTCCT
CCGCTTTTCTCTCTTGTCTTTAATTCATTGTTCACCTTAGCTTGCAGGCT
CTGGTCTGTCAAGCTCACCCCATGTAAAAGTGCGGACCAGTCCCTCTTCC
TGGCCGCACCCACCCCCATGGTGCCCGCCCATCTCTGACCATTTGTCCGC
CTATTCCTTCAACGCGCCCTCTGTCGCTCCCTCAATCGCTCCATCTATTG
CCCCTTCGCAATCGTATACCCTTTCTGTCTACCTGTTGGATGGCATGGCG
GACTACCACGACGCCGGTGGGCTAATTCTCGACGGCCCCTTTGATCCCGA
CGCCCAGGCCACCGTCACGGACTATATTGACTACACGGAATACCTCCCCG
CTGACCTCATTCGCTCCCTAACTCTCATCCGCGGCCTTGATGAACGCTAC
TTGGAAGCTACACAAGGCGTTCATGATCTCACCAAGGCCTATGGCCAACT
GCCCACCCTCCCCTCGGACGTACGTCCTGACGCGCGTGCTCTGCGCAAAG
ATATCTCTGAACAACTTGATCGCGCCATCAACGCCCGTGAATCGGCCTAT
GCGGAAGCTTGCCGTCTCTACGATGTCATCGATCGCCACTTCAACCGGCT
AGACAGCATTAAGCAAAAGCTCGAAGCTCTCCCCAAGCCCGCGTCGCGCG
AACCTACTCCTCCTCCCGCGCCGCCCGTCACAACAACCAAAAGGAGCCGC
TCGACCAAGAAAACCGAGGAAGCTTCTGGCCCGCCCACCACGACGCGCAT
CACTTTGCGCTTGGATGGCCACGATACTGCTCGCGCGACAACTGTGCAGA
AGTCGCGCACACGCCGATCCCTCATCTCCGCCGAGCATCTGGCCGATTTG
CACCCCGATTCGCCTATTGCCAGCACAGAGCATTCAGATGTGGAGCCGGA
CAGCAAAATAACGCCCTCAGAGTCACCCCCGGAGCCGGCAGCAGCGCCCG
CCAAGAAGGAGAAGGGCCGTCGGCGATCGCGGACTTCTGGCTTGGTTTCG
ACCGGTGCTCAAGGCCCTTCTGCTCCAGCCATATCGACCAGCAATGCGTT
AGCGATGCTCAAGCCACCTCCTGACGATGCCAAACCTGGAAGCGAGGATA
TGCCATGGTTGCGTCTGACTGAGTGGGAAATGACGAAACTGCGGAAGAAG
ATGAAGAAGAATGCCGTTTGGCAACCCAGCGAGGTCATGATTCATCGCGA
GCTGGCCTTGCGCGGCCGCGGCTGGGAGGCTTACCGAGCGGCGAAAGCTC
AGGCTGAGGCCACTGGTGCTGAATTCTTGGACTGTGACGACATCATGAAC
ACGTACGTTCCGGGCAAGCTGACCAAACGCAGCGAAGCCACCGGCGACAC
TGAGGGCACATTCGAGACTAAGCTTAGCAACCGTGGCATGAAGCTGAATG
AGGCCAAGAAGCTTAAACGGGAGAACCAGGCCCGAGAGCAGGCGGCAGCT
GCAGCCGCAGCCGCCGCCGCCGCAGCAGCACAAGAACAAACAGCCAAAGA
TGGAGTCCAGCCAGGAGTGGCTCCCACTGATGTACCCACAGCTAGTGTCC
CAGAAGTTTCAGCTGTGAGCAAGCCCACTCGTGCAGGGAAAAAGAGGAAA
CTCGAAGAGGTGACACCCCCAGAGGTTCCCCCCATTCCTTCAGCTCCCGT
CCCCTCCACATCTTCTGCCCCCTCTGCTTCCGCTGCCCCCTCTACGTCTG
ATGGTCCCCCCACTGTTGAGCCCTCTGCACCCGACGGTCCCTCTCCTTCT
GCACCCTCTGTTCCTACTACTGCCACCTCCGCTGCTTCCCCTGTTCCTAC
TGCCCCCGCTGTCTCCGCTGCTCCTACCGCGCCTGTGGAAATTGAAACCC
GTCCTTCGCTGCGAAGCGCGACTAAACGCCGCCGAACTAGCAAAGGATCC
CCCACACCCGTTGATCCAAACATCGCCAATCCTGAATTATCTACAAAAGC
AGCACCAGCTCCTACAGCTGTAGAAACCTCCGAGTCGCAGAAGCCTTCCT
TACCGTCGTCTCCAACTGGATCCAAGCGCGCTATCGCACAACCTACGATC
TCAGCCGTAAAAGCGGCGACGCCAACCCCCCCGGTTACCCGCCCCCCCTC
TCGCCGCTCGGCTGCTCTATCATTAGAGCCAACCACCAATGCCAGCGTCG
TTGCACCTTCTACTAAACGCGAGCTCCGTCAGAAAAGCGCCACACCTGCT
CGGAAGACTCCTGTGCCAGAAACCGCTCGAGCTGCCAGTGTGAGTGCTCC
CAACCGCAGGCGTAAACGCCCCGCTCCAGGTCCTGTATCTTCAGGCCAAG
ACGGTGGTGCAGCGGTAAGCTACGGTCGCCGCAAAGCGAAGCCCGGGAAG
AAGCGGATTGGGACGCGTGAGGTTGGCCTGAAAGATGGAACCCTGGCACG
TGAGGACATTCGAATCGACGAGGATGGAGTACTGGAAGAGATCGACCCGA
ACGAACCACGGTATTGTCTATGTGGAGACGTGAGTTTCGGGACGATGATC
TGCTGTGAAAATCAAGAGGTATGTGTTCTATATTTCTGCGTTGTATGGCG
CCTCTAACATGAGTAGTGCGACCGAGAATGGTTTCATCTTGACTGTGTCG
GGCTGTCTGAGGTACCAAGTCGCACGGCGAAGTGGTACTGTCCGGATTGT
CGGGTTAAGTTTAACAAGGGTGCAGACGGAATTGTCAAGAACAATCCGCG
GAGATAAAGCTATACCATACTGACTGCACAAATTTTCTGATTCTGAGTGG
GTGGTGAATATTCATGAGACCACGATTAGGCGCTTGGGCAAATTGTTGCA
TAGGGCTTGATTTTGATCTCTGATTCGTTCTATTGATTGCAGCGTGGCGA
AGATTTCATGGAGTAAAACACCCTTTGTTGGCTAATTTCATTCATCATAA
GAGCTAATTCGGGTGATGGCGCTACACTGAGAGTATAACGCATTTAATAA
CTATTTGTCACACTCGTACGTGGA back to topCoding sequence (CDS) from alignment at ch4:4328172..4331245+ >KJC3_013069-T3 ID=KJC3_013069-T3|Name=KJC3_013069-T3|organism=Aspergillus niger KJC3|type=CDS|length=2886bp|location=Sequence derived from alignment at ch4:4328172..4331245+ (Aspergillus niger KJC3)
ATGGCGGACTACCACGACGCCGGTGGGCTAATTCTCGACGGCCCCTTTGA
TCCCGACGCCCAGGCCACCGTCACGGACTATATTGACTACACGGAATACC
TCCCCGCTGACCTCATTCGCTCCCTAACTCTCATCCGCGGCCTTGATGAA
CGCTACTTGGAAGCTACACAAGGCGTTCATGATCTCACCAAGGCCTATGG
CCAACTGCCCACCCTCCCCTCGGACGTACGTCCTGACGCGCGTGCTCTGC
GCAAAGATATCTCTGAACAACTTGATCGCGCCATCAACGCCCGTGAATCG
GCCTATGCGGAAGCTTGCCGTCTCTACGATGTCATCGATCGCCACTTCAA
CCGGCTAGACAGCATTAAGCAAAAGCTCGAAGCTCTCCCCAAGCCCGCGT
CGCGCGAACCTACTCCTCCTCCCGCGCCGCCCGTCACAACAACCAAAAGG
AGCCGCTCGACCAAGAAAACCGAGGAAGCTTCTGGCCCGCCCACCACGAC
GCGCATCACTTTGCGCTTGGATGGCCACGATACTGCTCGCGCGACAACTG
TGCAGAAGTCGCGCACACGCCGATCCCTCATCTCCGCCGAGCATCTGGCC
GATTTGCACCCCGATTCGCCTATTGCCAGCACAGAGCATTCAGATGTGGA
GCCGGACAGCAAAATAACGCCCTCAGAGTCACCCCCGGAGCCGGCAGCAG
CGCCCGCCAAGAAGGAGAAGGGCCGTCGGCGATCGCGGACTTCTGGCTTG
GTTTCGACCGGTGCTCAAGGCCCTTCTGCTCCAGCCATATCGACCAGCAA
TGCGTTAGCGATGCTCAAGCCACCTCCTGACGATGCCAAACCTGGAAGCG
AGGATATGCCATGGTTGCGTCTGACTGAGTGGGAAATGACGAAACTGCGG
AAGAAGATGAAGAAGAATGCCGTTTGGCAACCCAGCGAGGTCATGATTCA
TCGCGAGCTGGCCTTGCGCGGCCGCGGCTGGGAGGCTTACCGAGCGGCGA
AAGCTCAGGCTGAGGCCACTGGTGCTGAATTCTTGGACTGTGACGACATC
ATGAACACGTACGTTCCGGGCAAGCTGACCAAACGCAGCGAAGCCACCGG
CGACACTGAGGGCACATTCGAGACTAAGCTTAGCAACCGTGGCATGAAGC
TGAATGAGGCCAAGAAGCTTAAACGGGAGAACCAGGCCCGAGAGCAGGCG
GCAGCTGCAGCCGCAGCCGCCGCCGCCGCAGCAGCACAAGAACAAACAGC
CAAAGATGGAGTCCAGCCAGGAGTGGCTCCCACTGATGTACCCACAGCTA
GTGTCCCAGAAGTTTCAGCTGTGAGCAAGCCCACTCGTGCAGGGAAAAAG
AGGAAACTCGAAGAGGATCCCCCACACCCGTTGATCCAAACATCGCCAAT
CCTGAATTATCTACAAAAGCAGCACCAGCTCCTACAGCTGTAGATGGCGG
ACTACCACGACGCCGGTGGGCTAATTCTCGACGGCCCCTTTGATCCCGAC
GCCCAGGCCACCGTCACGGACTATATTGACTACACGGAATACCTCCCCGC
TGACCTCATTCGCTCCCTAACTCTCATCCGCGGCCTTGATGAACGCTACT
TGGAAGCTACACAAGGCGTTCATGATCTCACCAAGGCCTATGGCCAACTG
CCCACCCTCCCCTCGGACGTACGTCCTGACGCGCGTGCTCTGCGCAAAGA
TATCTCTGAACAACTTGATCGCGCCATCAACGCCCGTGAATCGGCCTATG
CGGAAGCTTGCCGTCTCTACGATGTCATCGATCGCCACTTCAACCGGCTA
GACAGCATTAAGCAAAAGCTCGAAGCTCTCCCCAAGCCCGCGTCGCGCGA
ACCTACTCCTCCTCCCGCGCCGCCCGTCACAACAACCAAAAGGAGCCGCT
CGACCAAGAAAACCGAGGAAGCTTCTGGCCCGCCCACCACGACGCGCATC
ACTTTGCGCTTGGATGGCCACGATACTGCTCGCGCGACAACTGTGCAGAA
GTCGCGCACACGCCGATCCCTCATCTCCGCCGAGCATCTGGCCGATTTGC
ACCCCGATTCGCCTATTGCCAGCACAGAGCATTCAGATGTGGAGCCGGAC
AGCAAAATAACGCCCTCAGAGTCACCCCCGGAGCCGGCAGCAGCGCCCGC
CAAGAAGGAGAAGGGCCGTCGGCGATCGCGGACTTCTGGCTTGGTTTCGA
CCGGTGCTCAAGGCCCTTCTGCTCCAGCCATATCGACCAGCAATGCGTTA
GCGATGCTCAAGCCACCTCCTGACGATGCCAAACCTGGAAGCGAGGATAT
GCCATGGTTGCGTCTGACTGAGTGGGAAATGACGAAACTGCGGAAGAAGA
TGAAGAAGAATGCCGTTTGGCAACCCAGCGAGGTCATGATTCATCGCGAG
CTGGCCTTGCGCGGCCGCGGCTGGGAGGCTTACCGAGCGGCGAAAGCTCA
GGCTGAGGCCACTGGTGCTGAATTCTTGGACTGTGACGACATCATGAACA
CGTACGTTCCGGGCAAGCTGACCAAACGCAGCGAAGCCACCGGCGACACT
GAGGGCACATTCGAGACTAAGCTTAGCAACCGTGGCATGAAGCTGAATGA
GGCCAAGAAGCTTAAACGGGAGAACCAGGCCCGAGAGCAGGCGGCAGCTG
CAGCCGCAGCCGCCGCCGCCGCAGCAGCACAAGAACAAACAGCCAAAGAT
GGAGTCCAGCCAGGAGTGGCTCCCACTGATGTACCCACAGCTAGTGTCCC
AGAAGTTTCAGCTGTGAGCAAGCCCACTCGTGCAGGGAAAAAGAGGAAAC
TCGAAGAGGATCCCCCACACCCGTTGATCCAAACATCGCCAATCCTGAAT
TATCTACAAAAGCAGCACCAGCTCCTACAGCTGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013069-T3.utr5p1 | KJC3_013069-T3.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR024610 |
| DBxref | PFAM:PF12998 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4328172..4331245 + |
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