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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:714998..720443+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013072-T1 ID=KJC3_013072-T1|Name=KJC3_013072-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5446bp|location=Sequence derived from alignment at ch6:714998..720443+ (Aspergillus niger KJC3)
GTTTCTTGAACGTGGGGAGGAAAAATGTCGGGACGGGCCGAAACGCGAAC
CCCTGAACCGCCCGACCGCGACGAACGCGAAAACTCGCCACCGCGATTGG
TGAGGCCGAAACGCACGACAAGACCACCAGCCCACTATGCTCAAGAGCAA
GAGATCGATACTGAGCAGAGAAACACGCGCCCCCAGCGAAAGAAGAAGAA
CCAGGGCAAGCCAGTCCCCCAACGTGACGCGGCGACTTCGGACGACTCCT
CAGCAGAGAGCGAGGACTCAGACACCTCCACACTTGTGAAAGAGATTGTT
AAGCTCAGAAGAGAAATCAGACGACGAGATGAACTACACAAGGAGGAGCT
CCATAGAGTCAAAGAAGAGTTTGGCGCTGCCCTCGCAGAGTTTCGACATG
AATTACAGACCTTGGCGAATCGACCCTCGACACCGCAACCCCACCCCGAG
TCATGCGCTCAGAACAGCCACGAGGAGATCCTTCGCGAAATCCAATCCTT
GCGCATTGCAGTCAATCCTTCGGGATCCCCGTCCTATGCAGATGTCGCCC
GCACTCCCCCAACCAGCCAACCGAGTAATATACGGACTCTCTCATCGTGG
AACACGACACCGACTACCTTCACTGACACGCTATATTGCACGATAGACAC
CTCGAAAATGGCAGATACTGAAAATGAGAGACCATCAGCAGGTCCAATTA
GAACGGCAGTTGAAGCTGAAATCCGGACTATGGAAAATTACACGAACTGG
CGGTGCCGCGCGGTCACGGTGGATCCGAAGAACACCAGCCGGATCAGAAT
TGCGTGCCGAGATGAGGCTGAACACCAGCTGGTTAAGAAGGTGGCGGAAA
CCAAGGTCGGCGCAGGAGCCCGAGTGCTTCGTGACGAACTGTACCCGATT
AAAGTTGACAGCGTCAACAGAACTGCAGTGCTTGATGAAAACGGTGACAT
CCGAGCAGGAGCTGCGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCG
CTAAGATTGCATGGCTCAGTAGAAAGGAGAATGCGAAGGCCTACGGGTCA
ATGGTCGTTTATCTGACCAGAGGCGGTGATGCGCGGAGGCTCCTGGCCGA
CGGATTCTTTCACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAAT
ACCGACCCCGGCCGATGCAATGCTACAATTGCCAAGAGATTGGGCATAAG
GCGTTCCAGTGTAAGAACGCGCAGAAATGCGCAAAATGTGCCGCGGAGGG
CCATCACCACAGTAGCTGCGATCAAACGATTCCAAAGTGCATTCCATGCG
GAGGCCCTCACGAATCGTACAGCAAAAACTGTCGGAAGCTCTACCCATCG
CATCATGAATAAGACTCTTCGAGTTATTCAACTGAATGTGAGAAAACAGG
GGGCAGTGCACGAGAGCTTAATGAATGACGAAGAGACTCAGAACGCGGTG
GCGTTAGCGATTCAGGAACCCCAAGCGAGGAGGATTCAAGGCCGGCTCTT
GACCACCCCAATGGGACACCACAGATGGACGAAGATGGTTCCCTCTACTT
GGAGGGAAGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAACAAAGAT
GTCGAGGCGGAACAAGTGCCAATAGAGTCCCCGGATCTCACGGCAGCGGT
TATTAGGCTTCCTGAGCGACTAATTTTCATGGCATCAGTTTACGTGGAAG
GGGAAAATGCCTCAGCTTTGGACGATACATGCAAATACTTAATCAACGCG
ATCACGAAAGTACGGCGAGATACGGGTGCGGTGGTGGAGATTTTGATTAT
GGGAGACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGACGTGTCTT
TGAGAAGACAAGGTGAAGCGGATCCAATCATCGACCTCATGAACGAATGT
GCGCTCAGCAGTCTTCTCAAACGAGGCACAAAGACGTGGCATGGCGGAGG
ATACAGCGGGGACTGCGAGTCGACGATCGACCTGGTCCTGGCCTCGGACA
ACCTAACAGACTCCGTGATTAAGTGTGCCATACTCGGGACGGAGCACGGC
TCGGACCACTGCGCTATTGAGACCGTCTTTGATGCGCCCTGGTCGCTCCC
ACAGCATCAGGGACGACTTCTGTTGAAAAATGCTCCATGGAAAGAGATCA
ATGCCAGGATAGCGAACACTCTTGCCGCCACTCCGGCAGAGGGCACAGTG
CAGCAGAAAACCGACCGGCTCATGTCGGCGGTCTCGGAAGCGGTGCATGT
GTTAACACCAAGGTCAAAACCATCACCACACGCGAAGCGGTGGTGGACCG
CTGATTTAACGCAGCTCCGTCACATACACACATACTGGAGAAATCACGCC
CGCTCCGAGCGACGGGCGGGACGAAAAGCACCCTACCTGGAGACAATGGC
CCGATGCGCGGCAAAACAATACCACGATGCCATCCGGCAACAGAAGAAAA
AGCACTGGAATCAATTTCTTGCCGACAATGATAACATATGGAAAGCTGCT
AGATACCTGAAGTCGGGAGAAGACGCAGTGTTCGGGAAGATCCCGCAACT
CCTCAGAGCGGATGGGACCACGACCACTGATCACACGGAGCAGGCAGAAG
AATTGCTGACCAAATTCTTCCCGCCCCTGCCGGACAACATTGACGATGAA
GGGACTCGACCACAGAGAGCGCCAGTCGAGATGCCTGCCGTCACGATGGA
AGAGATCGAACGACAGCTGATGGCGGCAAAGTCTTGGAAGGCACCTGGCG
AGGACGGTCTGCCAGCAATAGTCTGGAAGATGACTTGGCCTACAGTCAAG
TACAGAGTCCTGGATCTCTTCCGGGCGTCGCTGGAAGAAGGCACGTTGCC
AAGACAGTGGAGACATGCGAAGATCATACCGCTTAAAAAGCCGAACAAAG
AGAACTACACCATTGCCAAAGCATGGAGACCGATTTCGCTCCTCGCGACG
CTGGGCAAGATACTGGAATCTGTGGTCGCAGAAAGGATCTCACACGCGGT
GGAGACTTATGGTTTGCTCCCGACCAGCCACTTCGGCGCCCGAAAGCAGC
GGTCCGCCGAGCAAGCACTCGTACTCCTGCAGGAGCAAATCTACGCGGCA
TGGCGCGGCCGACGCGTCGTGAGCTTGATCAGCTTCGATGTCAAGGGCGC
CTACAATGGAGTCTGCAAAGAACGGTTACTTCAGAGGATGAAAGCGCGAG
GCATACCGGAGGATCTACTCCGGTGGGTTGAGGCGTTCTGCTCGGAACGA
ACGGCGACCATTCAAATCAATGGGCAACTGTCTGAGACCCACAGCCTGCC
ACAGGCTGGACTGCCGCAAGGCTCGCCGCTATCCCCAATCCTGTTCCTCT
TCTTCAATGCAGACCTCGTACAACGTCAAATCGACGGCCAGGGAGGTGCG
ATTGCGTTCGTAGATGATTTTACCGCGTGGGTGACCGGACCAAGTGCGCA
GAGCAACCGGGAAGGTATTGAGGGAATCATTAAGGAAGCTCTTGACTGGG
AAAGACGAAGTGGGGCAACTTTTGAAGCAGAGAAAACAGCCATCACACAC
TTCACCCCCAAGGCTTACAAGTTGGACCGGGAGCCCTTCACCATCAAGGG
ACAAACTGTTGAACCCAAAGACCATGTCAAGATCCTGGGCGTCCTGATGG
ACACCAGTCTCAAATACAAGGAACACATTGCAAGGGCAGCGTCCAAGGGC
CTTGAGGCAGTGATGGAGCTTCGACGACTTCGAGGTCTGTCCCCATCAAC
AGCGCGGCAGCTATTCACATCGACAGTGGCCCCTGTAGTGGACTACGCGT
CTAATGTCTGGATGCATGCATTCAAAAATAAGGCCACGGGGCCGATCAAC
CGTGTCCAAAGGGTGGGAGCGCAAGCAATCGTCGGGACCTTTCTCACCGT
TGCAACCAGCGTCGCGGAGGCAGAGGCTCACATTGCCACAGCGCAGTACC
GTTTTTGGAGGCGGGCTGTGAAGATGTGGACCGACCTCCACACGCTCCCG
GATACCAATCCGCTCCGCCGAACTACAGCTCGGATCAGGAAATTTAGACG
GTTTCACCGTTCGCCGCTGTACCAGGTGGCAGACGCGCTGAAAAACATTG
ATATGGAAACACTGGAGACGATTAACCCGTTTACATTAGCGCCTTGGGAG
ACACGTATGCAGACTGATGGCGAAACCATGCCGGACCCGCAGTCTGCACC
GGGTGGATCAATACAGATCGCGATCAGCAGCTCGGCACGGAACGGGTTTG
TAGGATTTGGGGTAGCAATCGAAAAGCAGCCACCTCGATATCGAAAACTG
AAATTGAAGACCTTTTCCATGACACTGGGCGCAAGATCAGAGCAAAATCC
ATTCTCCGCAGAGCTAGCGGCTATAGCTCATACATTGAACGGGCTGGTGG
GACTGAAAGGATTCAGGCTCAGGCTGCTCACCAGCAACAAAGCGGCGGCC
CTCACGTTACAGAACCCTCGACAACAGTCAGGCCAGGAGTTCGTCTGCCA
TACGTACAAGCTGGTGAACAGTCTACGGAGGAAAGGAAACCACATCAGGA
TACTTTGGGTCCCTATTAGCGAAGACAACAAACTGCTGGGCCTAGCTAAG
GAGCAGGCCCGAGCCGCAACCCACGAGGACGCTATCCCACAAACACAGGT
TCCCAGAATGAAGTCAACAACGTTGAATCTCGCACGATCCCAAGCAGTCA
CCACGAAAGCCTTGCCAGAGGACGTAGGAAGACACGTCAAACGAGTGGAT
GCCGCACTCCCAGGAAAGCACACCCGACAGCTGTATGACGGATTATCGTG
GAAAGAAGCGACCGTGCTGGCTCAACTCCGGACCGGCATGGCCAGATTAA
ATGGGTATCTCTACCGGATCAATGCCGCGCAGACAGACCAGTGTGCATGC
GGACAAGCAAGAGAAACCGTGGAGCATTTTCTCTTCCGGTGTCAGAAGTG
GACCACGCAACGGATCGCACTGCTACAATGTACTCGAACTCAGCGGGGCA
ATCTCTCCCTCTGCCTGGGCGGGAAATCGCCTTCTGATGATCAGCTATGG
ACGCCGAACTTGGAGGCAGTACGAGCCTCAATACAATTTGCCATCGCCAC
GGGCCGACTCGACGCCACCTAACCATGTCAACCAAGACATTGACACCCTT
CTCCTAACTAACCTACACCAACCACCCTGTGCCACAGATGGTAGACGCGC
TTCAACTGCCGAGGATAGGATGTTGAACACTTGAAGAAGCGCCTTCAAGC
CAGTCTACTAACAAATATACTAACCCACAGGGATTTCTACGATAGTGACA
GCTGAGAGGACATATACTAAAAGGAACTATGTATGGGCTCGAAGGAGATA
CCGCAGATGTACATTAGACTTCGTGTTGATAGATTAGTGATAGTTGCCCT
TTCGGCTGAGCCGCCGGGCGTTAATGAATTGTGTGTGTGTGTGTGT back to topCoding sequence (CDS) from alignment at ch6:714998..720443+ >KJC3_013072-T1 ID=KJC3_013072-T1|Name=KJC3_013072-T1|organism=Aspergillus niger KJC3|type=CDS|length=3768bp|location=Sequence derived from alignment at ch6:714998..720443+ (Aspergillus niger KJC3)
ATGAATAAGACTCTTCGAGTTATTCAACTGAATGTGAGAAAACAGGGGGC
AGTGCACGAGAGCTTAATGAATGACGAAGAGACTCAGAACGCGGTGGCGT
TAGCGATTCAGGAACCCCAAGCGAGGAGGATTCAAGGCCGGCTCTTGACC
ACCCCAATGGGACACCACAGATGGACGAAGATGGTTCCCTCTACTTGGAG
GGAAGGCAGGTGGGCAATTCGAAGCATGCTCTGGATTAACAAAGATGTCG
AGGCGGAACAAGTGCCAATAGAGTCCCCGGATCTCACGGCAGCGGTTATT
AGGCTTCCTGAGCGACTAATTTTCATGGCATCAGTTTACGTGGAAGGGGA
AAATGCCTCAGCTTTGGACGATACATGCAAATACTTAATCAACGCGATCA
CGAAAGTACGGCGAGATACGGGTGCGGTGGTGGAGATTTTGATTATGGGA
GACTTCAACCGGCAGGACCAACTCTGGGGAGGAGACGACGTGTCTTTGAG
AAGACAAGGTGAAGCGGATCCAATCATCGACCTCATGAACGAATGTGCGC
TCAGCAGTCTTCTCAAACGAGGCACAAAGACGTGGCATGGCGGAGGATAC
AGCGGGGACTGCGAGTCGACGATCGACCTGGTCCTGGCCTCGGACAACCT
AACAGACTCCGTGATTAAGTGTGCCATACTCGGGACGGAGCACGGCTCGG
ACCACTGCGCTATTGAGACCGTCTTTGATGCGCCCTGGTCGCTCCCACAG
CATCAGGGACGACTTCTGTTGAAAAATGCTCCATGGAAAGAGATCAATGC
CAGGATAGCGAACACTCTTGCCGCCACTCCGGCAGAGGGCACAGTGCAGC
AGAAAACCGACCGGCTCATGTCGGCGGTCTCGGAAGCGGTGCATGTGTTA
ACACCAAGGTCAAAACCATCACCACACGCGAAGCGGTGGTGGACCGCTGA
TTTAACGCAGCTCCGTCACATACACACATACTGGAGAAATCACGCCCGCT
CCGAGCGACGGGCGGGACGAAAAGCACCCTACCTGGAGACAATGGCCCGA
TGCGCGGCAAAACAATACCACGATGCCATCCGGCAACAGAAGAAAAAGCA
CTGGAATCAATTTCTTGCCGACAATGATAACATATGGAAAGCTGCTAGAT
ACCTGAAGTCGGGAGAAGACGCAGTGTTCGGGAAGATCCCGCAACTCCTC
AGAGCGGATGGGACCACGACCACTGATCACACGGAGCAGGCAGAAGAATT
GCTGACCAAATTCTTCCCGCCCCTGCCGGACAACATTGACGATGAAGGGA
CTCGACCACAGAGAGCGCCAGTCGAGATGCCTGCCGTCACGATGGAAGAG
ATCGAACGACAGCTGATGGCGGCAAAGTCTTGGAAGGCACCTGGCGAGGA
CGGTCTGCCAGCAATAGTCTGGAAGATGACTTGGCCTACAGTCAAGTACA
GAGTCCTGGATCTCTTCCGGGCGTCGCTGGAAGAAGGCACGTTGCCAAGA
CAGTGGAGACATGCGAAGATCATACCGCTTAAAAAGCCGAACAAAGAGAA
CTACACCATTGCCAAAGCATGGAGACCGATTTCGCTCCTCGCGACGCTGG
GCAAGATACTGGAATCTGTGGTCGCAGAAAGGATCTCACACGCGGTGGAG
ACTTATGGTTTGCTCCCGACCAGCCACTTCGGCGCCCGAAAGCAGCGGTC
CGCCGAGCAAGCACTCGTACTCCTGCAGGAGCAAATCTACGCGGCATGGC
GCGGCCGACGCGTCGTGAGCTTGATCAGCTTCGATGTCAAGGGCGCCTAC
AATGGAGTCTGCAAAGAACGGTTACTTCAGAGGATGAAAGCGCGAGGCAT
ACCGGAGGATCTACTCCGGTGGGTTGAGGCGTTCTGCTCGGAACGAACGG
CGACCATTCAAATCAATGGGCAACTGTCTGAGACCCACAGCCTGCCACAG
GCTGGACTGCCGCAAGGCTCGCCGCTATCCCCAATCCTGTTCCTCTTCTT
CAATGCAGACCTCGTACAACGTCAAATCGACGGCCAGGGAGGTGCGATTG
CGTTCGTAGATGATTTTACCGCGTGGGTGACCGGACCAAGTGCGCAGAGC
AACCGGGAAGGTATTGAGGGAATCATTAAGGAAGCTCTTGACTGGGAAAG
ACGAAGTGGGGCAACTTTTGAAGCAGAGAAAACAGCCATCACACACTTCA
CCCCCAAGGCTTACAAGTTGGACCGGGAGCCCTTCACCATCAAGGGACAA
ACTGTTGAACCCAAAGACCATGTCAAGATCCTGGGCGTCCTGATGGACAC
CAGTCTCAAATACAAGGAACACATTGCAAGGGCAGCGTCCAAGGGCCTTG
AGGCAGTGATGGAGCTTCGACGACTTCGAGGTCTGTCCCCATCAACAGCG
CGGCAGCTATTCACATCGACAGTGGCCCCTGTAGTGGACTACGCGTCTAA
TGTCTGGATGCATGCATTCAAAAATAAGGCCACGGGGCCGATCAACCGTG
TCCAAAGGGTGGGAGCGCAAGCAATCGTCGGGACCTTTCTCACCGTTGCA
ACCAGCGTCGCGGAGGCAGAGGCTCACATTGCCACAGCGCAGTACCGTTT
TTGGAGGCGGGCTGTGAAGATGTGGACCGACCTCCACACGCTCCCGGATA
CCAATCCGCTCCGCCGAACTACAGCTCGGATCAGGAAATTTAGACGGTTT
CACCGTTCGCCGCTGTACCAGGTGGCAGACGCGCTGAAAAACATTGATAT
GGAAACACTGGAGACGATTAACCCGTTTACATTAGCGCCTTGGGAGACAC
GTATGCAGACTGATGGCGAAACCATGCCGGACCCGCAGTCTGCACCGGGT
GGATCAATACAGATCGCGATCAGCAGCTCGGCACGGAACGGGTTTGTAGG
ATTTGGGGTAGCAATCGAAAAGCAGCCACCTCGATATCGAAAACTGAAAT
TGAAGACCTTTTCCATGACACTGGGCGCAAGATCAGAGCAAAATCCATTC
TCCGCAGAGCTAGCGGCTATAGCTCATACATTGAACGGGCTGGTGGGACT
GAAAGGATTCAGGCTCAGGCTGCTCACCAGCAACAAAGCGGCGGCCCTCA
CGTTACAGAACCCTCGACAACAGTCAGGCCAGGAGTTCGTCTGCCATACG
TACAAGCTGGTGAACAGTCTACGGAGGAAAGGAAACCACATCAGGATACT
TTGGGTCCCTATTAGCGAAGACAACAAACTGCTGGGCCTAGCTAAGGAGC
AGGCCCGAGCCGCAACCCACGAGGACGCTATCCCACAAACACAGGTTCCC
AGAATGAAGTCAACAACGTTGAATCTCGCACGATCCCAAGCAGTCACCAC
GAAAGCCTTGCCAGAGGACGTAGGAAGACACGTCAAACGAGTGGATGCCG
CACTCCCAGGAAAGCACACCCGACAGCTGTATGACGGATTATCGTGGAAA
GAAGCGACCGTGCTGGCTCAACTCCGGACCGGCATGGCCAGATTAAATGG
GTATCTCTACCGGATCAATGCCGCGCAGACAGACCAGTGTGCATGCGGAC
AAGCAAGAGAAACCGTGGAGCATTTTCTCTTCCGGTGTCAGAAGTGGACC
ACGCAACGGATCGCACTGCTACAATGTACTCGAACTCAGCGGGGCAATCT
CTCCCTCTGCCTGGGCGGGAAATCGCCTTCTGATGATCAGCTATGGACGC
CGAACTTGGAGGCAGTACGAGCCTCAATACAATTTGCCATCGCCACGGGC
CGACTCGACGCCACCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013072-T1.utr5p1 | KJC3_013072-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013072-T1.utr3p1 | KJC3_013072-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043502 |
| DBxref | InterPro:IPR000477 |
| DBxref | InterPro:IPR005135 |
| DBxref | InterPro:IPR036691 |
| DBxref | PFAM:PF00078 |
| DBxref | PFAM:PF14529 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:714998..720443 + |
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