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KJC3_013074-T1, KJC3_013074-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013074-T1
Unique NameKJC3_013074-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3646246..3647271+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013074-T1 ID=KJC3_013074-T1|Name=KJC3_013074-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1026bp|location=Sequence derived from alignment at ch6:3646246..3647271+ (Aspergillus niger KJC3)
AGTCTTCTTGCCTGATCTGTTTCACCATCTCTCTTTATTATCTACTGCCA
CTTTGAACCACATATGCCCCCTTTCTCGAGCCTGGCCGTTCCTATCCTTA
GCGACCTCCGGGCTTTGCCCGCCGGCCACCCTCAGAGTGCCGCGGAACTA
GGATTACTGCCAACGTCCCCAAACCCTCCCCCTGTAACAAGTGACGAGGA
GGATGATGGCGGTATTTCCTTGGCACGTCTACGGAGCCCATCTGCAGGGA
ACTCTATTGAAACTGGTACTTCCAGTAACGTGGAGAGGAACTCCAATAGT
TTCTCACATGGCTCGCACCGTCTAGGAGATAGTATCGGTAAGATTCGGCT
CCACTATGATGTCAATAGCCGCCCTGATCATAAAAGATGACCCGATTGTC
CTTGATGCTACAACTACGGTGCCCAGTCATACAACAAATGTTATTGATAC
CGTTTCGAACAGCCGCCAGCAAAAGGAGTGCGGCACCCGCGGTGAGCAAT
GATTCCCCCACCTTCTCTGGTGTATACATACCGTTGCTGAAAGGGTACAG
GCCGCTCCCTTGAGGAGCATTATGAATGCAAGATATGCTTTTGTGAAGTG
GTAGACCTTGTGTTAGGCTGTGGTCACGTTTATTGCTATGATTGTTTCAA
CAAATTCTTTCACGATTCTGTGCTCTCCAAAGCCCTGGGAAATCCTCTAT
TGGCCGTTCAGTATCTAAGGAAGCGACAGTGCGAACCGTGCTGTCCATTT
TGCAAGAAGACTCTTCCCGGCTGTTTCGCTCGTCCAGATAATCGTGAACG
TCTCATCGGCTTCTACGTTCCTATGCGCTGCCCAGATTTAGAATCCCCTC
ACTGTTTTGTTGATGACTACATGGTGCAAGGTATCAAATTGAGGATGCTG
TGATGTCAGAATGCCCTTTTATGGAATTCTGGAGGACATTTTATATGGTG
TTTACTTCGTACATCTGTCATGCGATGTCCCAAACACGTCGAGGTTCGGA
TGTTACACAATAGCTCCAGTTGTTCC
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Coding sequence (CDS) from alignment at ch6:3646246..3647271+

>KJC3_013074-T1 ID=KJC3_013074-T1|Name=KJC3_013074-T1|organism=Aspergillus niger KJC3|type=CDS|length=2196bp|location=Sequence derived from alignment at ch6:3646246..3647271+ (Aspergillus niger KJC3)
ATGCCCCCTTTCTCGAGCCTGGCCGTTCCTATCCTTAGCGACCTCCGGGC
TTTGCCCGCCGGCCACCCTCAGAGTGCCGCGGAACTAGGATTACTGCCAA
CGTCCCCAAACCCTCCCCCTGTAACAAGTGACGAGGAGGATGATGGCGGT
ATTTCCTTGGCACGTCTACGGAGCCCATCTGCAGGGAACTCTATTGAAAC
TGGTACTTCCAGTAACGTGGAGAGGAACTCCAATAGTTTCTCACATGGCT
CGCACCGTCTAGGAGATAGTATCGATGACCCGATTGTCCTTGATGCTACA
ACTACGGTGCCCAGTCATACAACAAATGTTATTGATACCGTTTCGAACAG
CCGCCAGCAAAAGGAGTGCGGCACCCGCGGCCGCTCCCTTGAGGAGCATT
ATGAATGCAAGATATGCTTTTGTGAAGTGGTAGACCTTGTGTTAGGCTGT
GGTCACGTTTATTGCTATGATTGTTTCAACAAATTCTTTCACGATTCTGT
GCTCTCCAAAGCCCTGGGAAATCCTCTATTGGCCGTTCAGTATCTAAGGA
AGCGACAGTGCGAACCGTGCTGTCCATTTTGCAAGAAGACTCTTCCCGGC
TGTTTCGCTCGTCCAGATAATCGTGAACGTCTCATCGGCTTCTACGTTCC
TATGCGCTGCCCAGATTTAGAATCCCCTCACTGTTTTGTTGATGACTACA
TGGTGCAAGGTATCAAATTGAGGATGCTGTGAATGCCCCCTTTCTCGAGC
CTGGCCGTTCCTATCCTTAGCGACCTCCGGGCTTTGCCCGCCGGCCACCC
TCAGAGTGCCGCGGAACTAGGATTACTGCCAACGTCCCCAAACCCTCCCC
CTGTAACAAGTGACGAGGAGGATGATGGCGGTATTTCCTTGGCACGTCTA
CGGAGCCCATCTGCAGGGAACTCTATTGAAACTGGTACTTCCAGTAACGT
GGAGAGGAACTCCAATAGTTTCTCACATGGCTCGCACCGTCTAGGAGATA
GTATCGATGACCCGATTGTCCTTGATGCTACAACTACGGTGCCCAGTCAT
ACAACAAATGTTATTGATACCGTTTCGAACAGCCGCCAGCAAAAGGAGTG
CGGCACCCGCGGCCGCTCCCTTGAGGAGCATTATGAATGCAAGATATGCT
TTTGTGAAGTGGTAGACCTTGTGTTAGGCTGTGGTCACGTTTATTGCTAT
GATTGTTTCAACAAATTCTTTCACGATTCTGTGCTCTCCAAAGCCCTGGG
AAATCCTCTATTGGCCGTTCAGTATCTAAGGAAGCGACAGTGCGAACCGT
GCTGTCCATTTTGCAAGAAGACTCTTCCCGGCTGTTTCGCTCGTCCAGAT
AATCGTGAACGTCTCATCGGCTTCTACGTTCCTATGCGCTGCCCAGATTT
AGAATCCCCTCACTGTTTTGTTGATGACTACATGGTGCAAGGTATCAAAT
TGAGGATGCTGTGAATGCCCCCTTTCTCGAGCCTGGCCGTTCCTATCCTT
AGCGACCTCCGGGCTTTGCCCGCCGGCCACCCTCAGAGTGCCGCGGAACT
AGGATTACTGCCAACGTCCCCAAACCCTCCCCCTGTAACAAGTGACGAGG
AGGATGATGGCGGTATTTCCTTGGCACGTCTACGGAGCCCATCTGCAGGG
AACTCTATTGAAACTGGTACTTCCAGTAACGTGGAGAGGAACTCCAATAG
TTTCTCACATGGCTCGCACCGTCTAGGAGATAGTATCGATGACCCGATTG
TCCTTGATGCTACAACTACGGTGCCCAGTCATACAACAAATGTTATTGAT
ACCGTTTCGAACAGCCGCCAGCAAAAGGAGTGCGGCACCCGCGGCCGCTC
CCTTGAGGAGCATTATGAATGCAAGATATGCTTTTGTGAAGTGGTAGACC
TTGTGTTAGGCTGTGGTCACGTTTATTGCTATGATTGTTTCAACAAATTC
TTTCACGATTCTGTGCTCTCCAAAGCCCTGGGAAATCCTCTATTGGCCGT
TCAGTATCTAAGGAAGCGACAGTGCGAACCGTGCTGTCCATTTTGCAAGA
AGACTCTTCCCGGCTGTTTCGCTCGTCCAGATAATCGTGAACGTCTCATC
GGCTTCTACGTTCCTATGCGCTGCCCAGATTTAGAATCCCCTCACTGTTT
TGTTGATGACTACATGGTGCAAGGTATCAAATTGAGGATGCTGTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013074KJC3_013074Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013074-T1KJC3_013074-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013074-T1.utr5p1KJC3_013074-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013074-T1.exon1KJC3_013074-T1.exon1Aspergillus niger KJC3exon
KJC3_013074-T1.exon2KJC3_013074-T1.exon2Aspergillus niger KJC3exon
KJC3_013074-T1.exon3KJC3_013074-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013074-T1.cdsKJC3_013074-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013074-T1.utr3p1KJC3_013074-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR001841
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3646246..3647271 +
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