You are here

Home

KJC3_013078-T2, KJC3_013078-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013078-T2
Unique NameKJC3_013078-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3859985..3863200+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013078-T2 ID=KJC3_013078-T2|Name=KJC3_013078-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3216bp|location=Sequence derived from alignment at ch6:3859985..3863200+ (Aspergillus niger KJC3)
CCCACCCCAGTTCCCGATAGATGTGACGCTTAGACGGACTTATGTTGACC
TAATGGACTCTCCCCATCTATTCAGCTCCATTTGTATCAAGGACTATCCT
ATTCAACTGCCATATTCCCTGATAATTCTAGATGGGTTTCATGGGCTTTT
TGGGTCCGACTGGGTTTTGGGTACCCGCCCATACCCATTCGTACGGCGAC
GCGGTCTGACGCGCCACTAATTCGATCTATCCAAAACCCATAGTGAGGAA
AAAGAAAAGAAAAACCAAAGGCGCGAGACAAGAACCAGCTTACCATCCTC
TAAAATTGAATATTTATTTTTTTCTAAGCTATCCATATTCATTGAGTTGG
GACAGCAAAAACCGCCGGCCATTTATCATGACCTCATCCAGTTCTACTTC
AGCGAGGCTTATGTCCTTTCCATTTAGCTCTCTGACGCCAATCGAGGCGC
CCTCAGATTCAATTCCTTCGTCCGATTTTCCCTCGTCGGTATGTTGTGGC
TCTATCATTCGAGCCTATCGATACCCTCAAGATCTTGGACATAGACTGAC
CTGGGCCGAAGCCCTTTCTTAGTCCAAGACAGAACCATATTTTCTCTCCG
GATGATCCTCCGACTAGCCTTAAGTGCATCGGTCCTGACCGGAAAAAGAA
ATGGATTCTATACGACGCGGATTATGAAAGCGATTTTTTCTTATGGTGGT
TGCAAACCGAGTACGGGAGACAGCTGAACGGAAATGGCAGATCTAAGATC
AGGTGGTCAATCGAGACGCGCTTCGCTGATGTTTGGAATTACTTTGATCA
GGTGGCGGAGATATATACAGGTCGCCCAAAGGTTATCTGCAAGTCCTGTC
TGACGTTACTGGATCATCCGCATCACAAGTCCCACGGCACAAGCGCTATG
GGAAGGCACCAGAAGTCGAGTAGCTGCCGAAAAGGGAAAAAACGGATAGC
CCAGCAGACATTCATTGAAGACTCCATCCAACAGCCTGCAGCAACTACAG
TAAGTAGGGTTCGGTTTACGAAGGATCAACTGGAAGAGCAGCTTTTAAGG
ACTATAACAAGCCTGCGGCTCCCTTTCCAGGTGGTAGAGAATAGTGCATT
CCAACAACTATTGAGTCTGATCCACTCTGGTACTGATCGATTAGAGCTCC
CGTCTGCGAAGACGCTTCGTCGCCGCTTGCGTGATGCTGTGGTTGAACAA
CATACCTCCCAACTGAACGATTTACCTGAGGGCGCTAAAGTATCACTTGC
TTTAGATTGTTGGACCAGCCCGTTTCAGCAGGCATTCATGGCAATCACAG
CCTACTTTATTGACAGTGATTGGAATTATCGAGAACTTCTTCTTGGCTTT
GAGCCATTGCACGGTCCCCATTCAGGGAGCAATCTGAGCGATGTATTGCT
GGACCTGTTACGAGATCGACACCTCGTGGATCGAATCTTTACGGTGACCA
CAGATAATGCAACGAACAATGATACTTTAGTCCGGGGCTTGCAGGATGTA
TTGCTTGCCACAGGTGCAATCAACTCTCGCGACTCTATTATCCGTGTCCC
TTGCATGGCTCATGTTATCCAACTATGCCTCAAGCAACTCTTGGGGCATA
TTAAGGCGGCGCCTAAGAACGATGAAGTTAGCACCTTATGGTCAGACTCC
CAAGCCAGCTTTCTAAAGGATTCGGCAGATTGTGGGGATGTTGCTCACAC
ACTTACAAAGGTTCGTCTCTGCCTAGAAGCAAATTGAGTCGCACTAAAAC
GTTCATAGGTCCGGTCACTTGCAGTCTTTGTTAATGCCAGTCCTCAACGA
CGGGACGCCTTTATTGCTCTACAGCCTGTTCATGACCAACTTTTCCCACT
ACAGGACGTGCAAACACGCTGGAACTCGACGTTCCTAATGCTGCGACGAG
CCCGGAAACTACGAAACTGTATCGATCGGTATTGCACGGATCACGATTAT
GTGCAGTTCAAAATCAGCGATACTGAATGGCGGCAAATCGATTATCTTCT
CCAATTGACGAAGCCCTTCTTCCAGTTCACAATGGCTCTTATGAAAACAC
GGGACGTAACCATTCATAGCGTTTTTCTGGTCTACAGAAAGCTCCTGGAG
CATATTGAGAAGTCCACAAGGAGTTTGAGCAGGAAGACAACGCCGTGGAA
AAGAGCTATACATGATGCTTTGCTTGCAGCCAAACAGAAATTGAGGGAAT
ACTATGACAAGACTTACCGGGACCATGGCTTTCTGTACGCCACGGGGACA
ATGCTTGCCCCGCAGTACAAGCTCTCTGCTTTTGGTGATACAGAATACTC
GAAATGCCACAGTGAAACATTGAGAACCTACCGAAGTTACCTGAGGAAAG
GCTTTCACCAATACCAACAGCAGATCCCAGATCTATCTTTCTGTACCACA
ATACATCGTTCCCAGCAACAGACATCAGAGTTAGACCAGCTACTCGTGCC
GCGTATCTCTTTGCCGAATGATAGGAACCAGCTGGACGAGGTTGATCGGT
ATCTCCAAGAAGGTAAGGCCTTGGTCCGTGTATATTTTGCTTTTGAGTGG
CGATTGACCTTCCAAGGGATTGTGCCGCTTCCGCCGCGGGCGTACTGGAA
GGAACATGAGCATGAATTTCCTGTTCTTTCACGTTTAGCGCGCGACCTAC
TCGCCGTGCCAGCCACCGGTGCAGGAGTTGAACGCCTCTTCAATAGTGCC
AGAGATATCTGCCACTATCGCCGAGGATCTCTCCACGAAAAGACCATCCA
GGACCTGATGATGCATATGTGTGCCCAGAAGTTCACTTTAGACAGTCAGC
AACTCAGTCACCTTGAAAAAACGATACCAATGGCAGAAAATCAAGTAACG
CGCGAAGAGGAACTGGCCCTTAAGGCAACTGAAGAAGAGTTTGATCTGAT
CAGTGACTGTGAGGAAGACGAACCGGACGATATGGAAGAGGCCAGAGTAG
AGGCTATAGAATTAGAAGGGACAGAGGGTGAGCCAGAAGTCACAAGGATA
GAGAGGCTATCCAGGAGTGTCTCTGAAGAGCTAGATAGAGAAGATGAGGG
AATGTCCTTGCTTCCAGCCCCCCTGATCCAGCTTCGTGAGAGCTCACAGA
AGAGATCATCTGGCAGGGTTACTGTGCCATCTAGCAGATTGCAAGGGTAT
GAACTGTATTAGTGTTCGAAATTAGACAAGAGGAAGCTCACTTTAGTATC
ATGTTATTCAAGCAAA
back to top

Coding sequence (CDS) from alignment at ch6:3859985..3863200+

>KJC3_013078-T2 ID=KJC3_013078-T2|Name=KJC3_013078-T2|organism=Aspergillus niger KJC3|type=CDS|length=5352bp|location=Sequence derived from alignment at ch6:3859985..3863200+ (Aspergillus niger KJC3)
ATGACCTCATCCAGTTCTACTTCAGCGAGGCTTATGTCCTTTCCATTTAG
CTCTCTGACGCCAATCGAGGCGCCCTCAGATTCAATTCCTTCGTCCGATT
TTCCCTCGTCGCCCTTTCTTAGTCCAAGACAGAACCATATTTTCTCTCCG
GATGATCCTCCGACTAGCCTTAAGTGCATCGGTCCTGACCGGAAAAAGAA
ATGGATTCTATACGACGCGGATTATGAAAGCGATTTTTTCTTATGGTGGT
TGCAAACCGAGTACGGGAGACAGCTGAACGGAAATGGCAGATCTAAGATC
AGGTGGTCAATCGAGACGCGCTTCGCTGATGTTTGGAATTACTTTGATCA
GGTGGCGGAGATATATACAGGTCGCCCAAAGGTTATCTGCAAGTCCTGTC
TGACGTTACTGGATCATCCGCATCACAAGTCCCACGGCACAAGCGCTATG
GGAAGGCACCAGAAGTCGAGTAGCTGCCGAAAAGGGAAAAAACGGATAGC
CCAGCAGACATTCATTGAAGACTCCATCCAACAGCCTGCAGCAACTACAG
TAAGTAGGGTTCGGTTTACGAAGGATCAACTGGAAGAGCAGCTTTTAAGG
ACTATAACAAGCCTGCGGCTCCCTTTCCAGGTGGTAGAGAATAGTGCATT
CCAACAACTATTGAGTCTGATCCACTCTGGTACTGATCGATTAGAGCTCC
CGTCTGCGAAGACGCTTCGTCGCCGCTTGCGTGATGCTGTGGTTGAACAA
CATACCTCCCAACTGAACGATTTACCTGAGGGCGCTAAAGTATCACTTGC
TTTAGATTGTTGGACCAGCCCGTTTCAGCAGGCATTCATGGCAATCACAG
CCTACTTTATTGACAGTGATTGGAATTATCGAGAACTTCTTCTTGGCTTT
GAGCCATTGCACGGTCCCCATTCAGGGAGCAATCTGAGCGATGTATTGCT
GGACCTGTTACGAGATCGACACCTCGTGGATCGAATCTTTACGGTGACCA
CAGATAATGCAACGAACAATGATACTTTAGTCCGGGGCTTGCAGGATGTA
TTGCTTGCCACAGGTGCAATCAACTCTCGCGACTCTATTATCCGTGTCCC
TTGCATGGCTCATGTTATCCAACTATGCCTCAAGCAACTCTTGGGGCATA
TTAAGGCGGCGCCTAAGAACGATGAAATTGTGGGGATGTTGCTCACACAC
TTACAAAGGTCCGGTCACTTGCAGTCTTTGTTAATGCCAGTCCTCAACGA
CGGGACGCCTTTATTGCTCTACAGCCTGTTCATGACCAACTTTTCCCACT
ACAGGACGTGCAAACACGCTGGAACTCGACGTTCCTAAATGACCTCATCC
AGTTCTACTTCAGCGAGGCTTATGTCCTTTCCATTTAGCTCTCTGACGCC
AATCGAGGCGCCCTCAGATTCAATTCCTTCGTCCGATTTTCCCTCGTCGC
CCTTTCTTAGTCCAAGACAGAACCATATTTTCTCTCCGGATGATCCTCCG
ACTAGCCTTAAGTGCATCGGTCCTGACCGGAAAAAGAAATGGATTCTATA
CGACGCGGATTATGAAAGCGATTTTTTCTTATGGTGGTTGCAAACCGAGT
ACGGGAGACAGCTGAACGGAAATGGCAGATCTAAGATCAGGTGGTCAATC
GAGACGCGCTTCGCTGATGTTTGGAATTACTTTGATCAGGTGGCGGAGAT
ATATACAGGTCGCCCAAAGGTTATCTGCAAGTCCTGTCTGACGTTACTGG
ATCATCCGCATCACAAGTCCCACGGCACAAGCGCTATGGGAAGGCACCAG
AAGTCGAGTAGCTGCCGAAAAGGGAAAAAACGGATAGCCCAGCAGACATT
CATTGAAGACTCCATCCAACAGCCTGCAGCAACTACAGTAAGTAGGGTTC
GGTTTACGAAGGATCAACTGGAAGAGCAGCTTTTAAGGACTATAACAAGC
CTGCGGCTCCCTTTCCAGGTGGTAGAGAATAGTGCATTCCAACAACTATT
GAGTCTGATCCACTCTGGTACTGATCGATTAGAGCTCCCGTCTGCGAAGA
CGCTTCGTCGCCGCTTGCGTGATGCTGTGGTTGAACAACATACCTCCCAA
CTGAACGATTTACCTGAGGGCGCTAAAGTATCACTTGCTTTAGATTGTTG
GACCAGCCCGTTTCAGCAGGCATTCATGGCAATCACAGCCTACTTTATTG
ACAGTGATTGGAATTATCGAGAACTTCTTCTTGGCTTTGAGCCATTGCAC
GGTCCCCATTCAGGGAGCAATCTGAGCGATGTATTGCTGGACCTGTTACG
AGATCGACACCTCGTGGATCGAATCTTTACGGTGACCACAGATAATGCAA
CGAACAATGATACTTTAGTCCGGGGCTTGCAGGATGTATTGCTTGCCACA
GGTGCAATCAACTCTCGCGACTCTATTATCCGTGTCCCTTGCATGGCTCA
TGTTATCCAACTATGCCTCAAGCAACTCTTGGGGCATATTAAGGCGGCGC
CTAAGAACGATGAAATTGTGGGGATGTTGCTCACACACTTACAAAGGTCC
GGTCACTTGCAGTCTTTGTTAATGCCAGTCCTCAACGACGGGACGCCTTT
ATTGCTCTACAGCCTGTTCATGACCAACTTTTCCCACTACAGGACGTGCA
AACACGCTGGAACTCGACGTTCCTAAATGACCTCATCCAGTTCTACTTCA
GCGAGGCTTATGTCCTTTCCATTTAGCTCTCTGACGCCAATCGAGGCGCC
CTCAGATTCAATTCCTTCGTCCGATTTTCCCTCGTCGCCCTTTCTTAGTC
CAAGACAGAACCATATTTTCTCTCCGGATGATCCTCCGACTAGCCTTAAG
TGCATCGGTCCTGACCGGAAAAAGAAATGGATTCTATACGACGCGGATTA
TGAAAGCGATTTTTTCTTATGGTGGTTGCAAACCGAGTACGGGAGACAGC
TGAACGGAAATGGCAGATCTAAGATCAGGTGGTCAATCGAGACGCGCTTC
GCTGATGTTTGGAATTACTTTGATCAGGTGGCGGAGATATATACAGGTCG
CCCAAAGGTTATCTGCAAGTCCTGTCTGACGTTACTGGATCATCCGCATC
ACAAGTCCCACGGCACAAGCGCTATGGGAAGGCACCAGAAGTCGAGTAGC
TGCCGAAAAGGGAAAAAACGGATAGCCCAGCAGACATTCATTGAAGACTC
CATCCAACAGCCTGCAGCAACTACAGTAAGTAGGGTTCGGTTTACGAAGG
ATCAACTGGAAGAGCAGCTTTTAAGGACTATAACAAGCCTGCGGCTCCCT
TTCCAGGTGGTAGAGAATAGTGCATTCCAACAACTATTGAGTCTGATCCA
CTCTGGTACTGATCGATTAGAGCTCCCGTCTGCGAAGACGCTTCGTCGCC
GCTTGCGTGATGCTGTGGTTGAACAACATACCTCCCAACTGAACGATTTA
CCTGAGGGCGCTAAAGTATCACTTGCTTTAGATTGTTGGACCAGCCCGTT
TCAGCAGGCATTCATGGCAATCACAGCCTACTTTATTGACAGTGATTGGA
ATTATCGAGAACTTCTTCTTGGCTTTGAGCCATTGCACGGTCCCCATTCA
GGGAGCAATCTGAGCGATGTATTGCTGGACCTGTTACGAGATCGACACCT
CGTGGATCGAATCTTTACGGTGACCACAGATAATGCAACGAACAATGATA
CTTTAGTCCGGGGCTTGCAGGATGTATTGCTTGCCACAGGTGCAATCAAC
TCTCGCGACTCTATTATCCGTGTCCCTTGCATGGCTCATGTTATCCAACT
ATGCCTCAAGCAACTCTTGGGGCATATTAAGGCGGCGCCTAAGAACGATG
AAATTGTGGGGATGTTGCTCACACACTTACAAAGGTCCGGTCACTTGCAG
TCTTTGTTAATGCCAGTCCTCAACGACGGGACGCCTTTATTGCTCTACAG
CCTGTTCATGACCAACTTTTCCCACTACAGGACGTGCAAACACGCTGGAA
CTCGACGTTCCTAAATGACCTCATCCAGTTCTACTTCAGCGAGGCTTATG
TCCTTTCCATTTAGCTCTCTGACGCCAATCGAGGCGCCCTCAGATTCAAT
TCCTTCGTCCGATTTTCCCTCGTCGCCCTTTCTTAGTCCAAGACAGAACC
ATATTTTCTCTCCGGATGATCCTCCGACTAGCCTTAAGTGCATCGGTCCT
GACCGGAAAAAGAAATGGATTCTATACGACGCGGATTATGAAAGCGATTT
TTTCTTATGGTGGTTGCAAACCGAGTACGGGAGACAGCTGAACGGAAATG
GCAGATCTAAGATCAGGTGGTCAATCGAGACGCGCTTCGCTGATGTTTGG
AATTACTTTGATCAGGTGGCGGAGATATATACAGGTCGCCCAAAGGTTAT
CTGCAAGTCCTGTCTGACGTTACTGGATCATCCGCATCACAAGTCCCACG
GCACAAGCGCTATGGGAAGGCACCAGAAGTCGAGTAGCTGCCGAAAAGGG
AAAAAACGGATAGCCCAGCAGACATTCATTGAAGACTCCATCCAACAGCC
TGCAGCAACTACAGTAAGTAGGGTTCGGTTTACGAAGGATCAACTGGAAG
AGCAGCTTTTAAGGACTATAACAAGCCTGCGGCTCCCTTTCCAGGTGGTA
GAGAATAGTGCATTCCAACAACTATTGAGTCTGATCCACTCTGGTACTGA
TCGATTAGAGCTCCCGTCTGCGAAGACGCTTCGTCGCCGCTTGCGTGATG
CTGTGGTTGAACAACATACCTCCCAACTGAACGATTTACCTGAGGGCGCT
AAAGTATCACTTGCTTTAGATTGTTGGACCAGCCCGTTTCAGCAGGCATT
CATGGCAATCACAGCCTACTTTATTGACAGTGATTGGAATTATCGAGAAC
TTCTTCTTGGCTTTGAGCCATTGCACGGTCCCCATTCAGGGAGCAATCTG
AGCGATGTATTGCTGGACCTGTTACGAGATCGACACCTCGTGGATCGAAT
CTTTACGGTGACCACAGATAATGCAACGAACAATGATACTTTAGTCCGGG
GCTTGCAGGATGTATTGCTTGCCACAGGTGCAATCAACTCTCGCGACTCT
ATTATCCGTGTCCCTTGCATGGCTCATGTTATCCAACTATGCCTCAAGCA
ACTCTTGGGGCATATTAAGGCGGCGCCTAAGAACGATGAAATTGTGGGGA
TGTTGCTCACACACTTACAAAGGTCCGGTCACTTGCAGTCTTTGTTAATG
CCAGTCCTCAACGACGGGACGCCTTTATTGCTCTACAGCCTGTTCATGAC
CAACTTTTCCCACTACAGGACGTGCAAACACGCTGGAACTCGACGTTCCT
AA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013078KJC3_013078Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013078-T2KJC3_013078-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013078-T2.utr5p1KJC3_013078-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013078-T2.exon1KJC3_013078-T2.exon1Aspergillus niger KJC3exon
KJC3_013078-T2.exon2KJC3_013078-T2.exon2Aspergillus niger KJC3exon
KJC3_013078-T2.exon3KJC3_013078-T2.exon3Aspergillus niger KJC3exon
KJC3_013078-T2.exon4KJC3_013078-T2.exon4Aspergillus niger KJC3exon
KJC3_013078-T2.exon5KJC3_013078-T2.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013078-T2.cdsKJC3_013078-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013078-T2.utr3p1KJC3_013078-T2.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_013078-T2.utr3p2KJC3_013078-T2.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR003656
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3859985..3863200 +
Powered by Drupal