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KJC3_013081-T1, KJC3_013081-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013081-T1
Unique NameKJC3_013081-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4109819..4112911+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013081-T1 ID=KJC3_013081-T1|Name=KJC3_013081-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3093bp|location=Sequence derived from alignment at ch6:4109819..4112911+ (Aspergillus niger KJC3)
GGGTAGGCATGGTAATTGTGCAAGATACTGTATTAGTAGCCCCTGGCGAG
CACGCTGGGTAACTGTTCTCGTCAGACAGTTAGGACGATGGATTTCTACC
TTCTCGTGGTGTCCGGTGTCAGTACCCTCTCGCTGCGTGGAGGGGAAGCC
AAAAGAATCCAGGTGGTGCGGGTAGGGCCGAGCCGCAGAGTTTTCCGTGG
TAGCCGAGCCCGCCCAACCCACGAAAATCAGAGGAAAAGGGTTATGAAAA
CCATCCGACGACTGTTTACTCGATTCGTACTCGAGACCGACACTGGACTT
GCTTTTCCAGCGGACGTGGTATCGCCTAAACAGGAGACAGGACACCTCTG
AGCTTGAACGCTCTCTGAGATTGCGACACGCCCAGCAGAAGTTTTGAGAA
CACAATTTGAATACGCGTGGAGCGACGAGGGAGAATAGAACCAGTCAAGC
AGTGGATCACGCGAGTCTGGGGAATGACGCCAACAGTTCTGGTTACAAGA
CCCTCGTTAAGGCTCTGCCACGGGCAGTCTTGATCGGAAATGCTGACCGT
CTGCTTCTCTAGGGGCGTGCGATCCAGCGACGAACCTCACTGAACTCGTT
AAGGCGTAGCTACGGGTGCTCGGGAGGTCTGCGAAACTGGGGATACAAGC
TTGGTTAGTGGAGGATGGTCGAAGTATCGCGCAGGGCTACTGGAGATACT
TCTAGTCCACCTCTGCAAGACACGGTCGGCTAGTCGAGAGAGATCTCGGC
TAGTAACGCGAAGGAGGGAAACATTCCCTGTGGGGCGTGGCACATAATGG
CAGTGACGGACAAGTAGAAAGAACTTGACGAGACTGTCTATGTGGCCCGA
GAGGACGGACGCGCGTGTCGGTGTGCAAAGAGACGGAAATCAGCTACCTC
ACTCGCACTGGGGACCTGATGTCGAACGGCCAAAGTGGTGACGTCCTAGT
GGGGAGGGTCCTACCCATTTTCGCTATCTCACTCGCACTGAGAACCTGCG
GCTGTTTGACTGACGTGAAGCCGCTCTAGCTGAAATGCCGGTGATGCATG
CTTAAGGAGCAAACCTGGAGACACCCGGGGTGAGAGGTTTTGGCCGGGGC
CTCAATATCTGGAAGACGCTCATCGAGAGTTGAGTGGACTGAAAACCAGG
GCAGTGGCCTGAACAAGCAGGCCTGTCGAAGCTGCTTTACACCAGCTGCA
AGAACTCGTTAAGGCTTGGCCACGGGCAGCCTTGGCTGTGTAGATATGTC
TCTTGGGCCGCTGAAAAAACCGAGCTGATTCACTTGACCCGACGCAAAAA
GGCACACAGAATCGGACAGATCCGGATGAACGGCCAGGTTGTTCAACCAG
CCGACACTGCCAAGCTTCTAGGAGTCATCTTTGACAAGGAGCTGCGGTGG
AAAGCACACGTACAGAGAGCAGTTCAACGAGCAAGCAAGGTAAACATAGC
CCTGAGTGGGCTACGGCACCTTCGGCCGGAACAGATGCGCCAGCTCTACC
AGGCCTGCGTGATACCAGTGCTGGATTACGCATCCACAGTCTGGCATAAA
CCACTCCGAGACAAGATCCATCTGAGGCTTCTTGAGACAGTCCAACGGGC
CGCCCTCATCCGGATCCTGTCGGCCTTCCGGACAGTATCCACGTCAGCTC
TCGAAGTCGAAGCCCACATGCTGCCTACCCACCTGCGACTCAAGCAACGG
GCACAGATAGTGATAGCCCGCTTCAGCACCTTACCGGAAGACCACCCAGT
TCATGACGTAATCAACCGGGCAAGAGTACGCAGCACCCAGGTCGGCAATA
GGGCGCGCTTTCCCCTGGCAGAAACCCTACGAACAATGAACCTCACGCGG
CTGCAAGCCCTGGAAAGGATTGATCCCAGACCACTAGCACCTTGGCGAGC
CCAATCATTCACCGATATTGATATTGAGCTGGATCGGGAGAAAGCACAGA
CCAATGCTCTAGCGAGAGCGGCCACACCCAACATTACAGTCTTTTCGGAT
GCCTCGGGCAAAGAGAATCAGCTAGGAGCCGCAGCGGTGGCTCTCGATCA
CAACCAGCAGATCGTAGGGTCTCGACAAGTCAGCATTGGTTCGATGGAGT
TCTGGTCCGTCTACGCAGCTGAGCTAATGGCGATCTACTACGCGATCGGG
CTGGTTTTTCAGCTCGCGCAGAAGAACCAGAGATCCAGAGCAACAGATGC
AGAGCCAGCGACAATCCTTAGTGACAGCATGTCGGCCCTGCAGGTTATCA
AAAACTCCTGGAACAAATCAGGCCAGCGTATCATTCAGGCGATTCACCAG
TCGGCCGGGGAGCTCAGGGCGCGAGGGATCCCACTGCGACTACAATGGGT
TCCGGGTCACTGCGGCAACCCTGGAAACGAAGCAGCAGACCGCCTAGCCA
AAGCCACGGTAGGGGGTGAAAAGAGACACCCCTTTAGACATCTTCTGTCA
CGAGAGAAAAGGTACATCCGCAAGAATATTAGCGACGAATGGCACCAAGA
ATGGAGGGCCTCTCGAAACGGAGGACATCTCCGCCGCATTGATCGGGCCC
TACCGGCCAACCGGACCCGCCGGCTCTACGGCTCGCTCCCCGAAATCGAG
CCTACTTACTCACCCAACTCCGGACTGGCCACTCATGGCTGGCGACACAC
GGAAAACAGCGCGGGCTCCGAGACGATGAGGAATGTGAATGTGGGGCAAC
GGAAACCGTGGTCCACGTGTTAATCGATTGCCCGCGGCTTAGTGGGCTAC
GCCAAGCCCTCCGACGGAAGATTGGAGGGGCATTCAACAATATTTCCGAT
ATGCTGGGAGGAGCAGGACAAGGTAGGGAGGGTAGGTTCCAAGATGGTCC
GCAAGACAGTAGCGTCCTCGGGGCGGTCCTGGACTTTGCAGAGGCATCGC
AGAGATTCCGAAGTCGCGCGCCACGAGGGCGGCACAACACAACCCCAGGC
ACTGGCCACCACAGGCCTTGACGAGGCTCCAAGTTCGTCAGGAAAGTAAT
AGTCTACGATGAATGGATGTACATAGAGCGTGGAGATAGTAGTACCCTGC
ATATCGCTCAGGCGAGGGGTCAGTGTATGAATCAACAACAACA
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Coding sequence (CDS) from alignment at ch6:4109819..4112911+

>KJC3_013081-T1 ID=KJC3_013081-T1|Name=KJC3_013081-T1|organism=Aspergillus niger KJC3|type=CDS|length=1398bp|location=Sequence derived from alignment at ch6:4109819..4112911+ (Aspergillus niger KJC3)
ATGAACGGCCAGGTTGTTCAACCAGCCGACACTGCCAAGCTTCTAGGAGT
CATCTTTGACAAGGAGCTGCGGTGGAAAGCACACGTACAGAGAGCAGTTC
AACGAGCAAGCAAGGTAAACATAGCCCTGAGTGGGCTACGGCACCTTCGG
CCGGAACAGATGCGCCAGCTCTACCAGGCCTGCGTGATACCAGTGCTGGA
TTACGCATCCACAGTCTGGCATAAACCACTCCGAGACAAGATCCATCTGA
GGCTTCTTGAGACAGTCCAACGGGCCGCCCTCATCCGGATCCTGTCGGCC
TTCCGGACAGTATCCACGTCAGCTCTCGAAGTCGAAGCCCACATGCTGCC
TACCCACCTGCGACTCAAGCAACGGGCACAGATAGTGATAGCCCGCTTCA
GCACCTTACCGGAAGACCACCCAGTTCATGACGTAATCAACCGGGCAAGA
GTACGCAGCACCCAGGTCGGCAATAGGGCGCGCTTTCCCCTGGCAGAAAC
CCTACGAACAATGAACCTCACGCGGCTGCAAGCCCTGGAAAGGATTGATC
CCAGACCACTAGCACCTTGGCGAGCCCAATCATTCACCGATATTGATATT
GAGCTGGATCGGGAGAAAGCACAGACCAATGCTCTAGCGAGAGCGGCCAC
ACCCAACATTACAGTCTTTTCGGATGCCTCGGGCAAAGAGAATCAGCTAG
GAGCCGCAGCGGTGGCTCTCGATCACAACCAGCAGATCGTAGGGTCTCGA
CAAGTCAGCATTGGTTCGATGGAGTTCTGGTCCGTCTACGCAGCTGAGCT
AATGGCGATCTACTACGCGATCGGGCTGGTTTTTCAGCTCGCGCAGAAGA
ACCAGAGATCCAGAGCAACAGATGCAGAGCCAGCGACAATCCTTAGTGAC
AGCATGTCGGCCCTGCAGGTTATCAAAAACTCCTGGAACAAATCAGGCCA
GCGTATCATTCAGGCGATTCACCAGTCGGCCGGGGAGCTCAGGGCGCGAG
GGATCCCACTGCGACTACAATGGGTTCCGGGTCACTGCGGCAACCCTGGA
AACGAAGCAGCAGACCGCCTAGCCAAAGCCACGGTAGGGGGTGAAAAGAG
ACACCCCTTTAGACATCTTCTGTCACGAGAGAAAAGGTACATCCGCAAGA
ATATTAGCGACGAATGGCACCAAGAATGGAGGGCCTCTCGAAACGGAGGA
CATCTCCGCCGCATTGATCGGGCCCTACCGGCCAACCGGACCCGCCGGCT
CTACGGCTCGCTCCCCGAAATCGAGCCTACTTACTCACCCAACTCCGGAC
TGGCCACTCATGGCTGGCGACACACGGAAAACAGCGCGGGCTCCGAGACG
ATGAGGAATGTGAATGTGGGGCAACGGAAACCGTGGTCCACGTGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004523RNA-DNA hybrid ribonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013081KJC3_013081Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013081-T1.utr5p1KJC3_013081-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013081-T1.exon1KJC3_013081-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013081-T1.cdsKJC3_013081-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013081-T1.utr3p1KJC3_013081-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013081-T1KJC3_013081-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR002156
DBxrefInterPro:IPR036397
DBxrefPFAM:PF00075
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4109819..4112911 +
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