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KJC3_013083-T1, KJC3_013083-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013083-T1
Unique NameKJC3_013083-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4144240..4146687-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013083-T1 ID=KJC3_013083-T1|Name=KJC3_013083-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2448bp|location=Sequence derived from alignment at ch6:4144240..4146687- (Aspergillus niger KJC3)
GCAGTTTGTCCTAAGAGCAACCAAACTGATAAAGAGGGACGCAGCCACCA
GTAGATACCCGTGATGGAGTTTCGGTGCAACGTCTCATTGCATTTGCATT
AGACCAAACAGTGAGAAACTTCTCACTTCACAATTTGACGGACTAAATCA
TATCAAGATGCCCAACTCTGGCTGTCACCAGAACGAATCCTACATGAACT
GCAGGCCATGTAAACGGTGCCATGAAAAATGCGATAAATCCTTGCCGCAA
TGGTATGCCTTCCCACAGAGCACAGTGCATAAAGCCGAGTAAATTAACTA
GCGCAGTGGGCGTTGCATCAAGCGCAGCGTCTCCTGCAACTACCCAAACA
CAGCAGAGATTGAGAAAGGGCCTAAGTATTGGCGGCCTATCAGACCGAAA
CCGAACTACTTGCCTCTAAACAAACTCATTGATCTTATTACCAAGCTCTA
TGAAAGTCTGGAACAACGCGGCATGAGAAACTACACAATCTGGGCTCAGA
AGTTTCCTCTGTAAGTAATTCTAATTCATATTGAAGCCAGAGCTGATATC
ATATCCAGATTCTATTCTATGGCAGGCTCCGATAACTTAGTAATGAGCTC
GCTCCTCACCCTATCCACATCCTTGTTAGCTACAATCGAGCCGAAGGTGG
AAACAAAACAGACAGTTTTCTACTTTCGTCAGACTGCAATCGAGCAACTA
CGAATAGCTTCTAGCAAGCTTTCAACAGAGAACTATGATAGTGTCCTTGC
GGCTACCATCCTGTTATTATGGGCAGACAGTGAACGGTATAGAATCCCTT
ATTGCCAATACTACGGATGCTGATAAGTTTAGGCCAAGCTGGATAGTATT
GTGGACTGGTCTGAAATCTGTCTTCTATTCTATGCCGCAGGAATGGAGGC
ACAAGTCTGAGCTGGCAAAGTTCCTCGAGACTGAACAATACCTTCAAACT
TTGGACTCGTCTTCTATCGTGAGCTGCCAGTTCAATAATAAGAATCTATC
CGGTCTTGCCGATACGATTACAGTCCTGCGGCATATCCAGAGACAACTTG
TGCATATTAAAAAGCACTACAATCAGGTGAACAAACTGGTGGATTTTCTG
GATAAATTCCTTGGTGATATTGGTTCTCTTTCGCCAGATCAGGCTTTCCA
GCGCGTGCACATTCTGCGACAGTGGCTCTTTTGGCTTCCTCCAGTCATGC
TGCGAGATGGCGTTGACGACAACCTCGGTCTAGCGGTTCTAGCACAATTT
TTTGCTGTGGGACTCAACCTGTACTGCTTATTTCCAGAGCTAGGATGCCA
TGATCTTGGGCCATTGGCTGTGGGCCCTATTAAAGAAATTGACCGTACTG
TCCGTGCGCGCAACATGGCGAAGCCTCACGACCCGGACGTGCAACTGGCC
ATGTACCTCATGGGCATGCCCCAAAGTATCGCCACCAAGTATCAGGATCG
CCTTATCGCCGACGAAAGTGCTGTGGGACTATAAGAGCGCCGTGATTATG
TTATGTATCTGGGTCCTCTTTAGCGCAGTTGGAGCACCTGTGTTTCTGTT
AGCCGTCGTGGCGAGGAAAGCTTACCACATCGCATGGACTGAACATGGGG
AAGTACTAAGTCATCATTCTGGTGTGTGCTCGTACGTTCAGTTAAGCTGA
TACAGGAGTCTAAAAGGAGGGGCTAAGTGGCAAATTGCAAGCAAATGTAT
TATAGTTTCATCAAGTAATGGACATCTCAATGGCTTTCGGTTCCCATATA
TATCAATTTGCGTGTGCGAACAGTTTCCGCCTTCGGCAGCGAACAGTCAA
TAGAAGCCTTCCACGGAGTTTGTTGGTCTTTCGATTTCCCCGGTGTGCTG
GATTCAAAGAATTTAAGTTGAGCTACGTTTTTCGTTTCATTAGCTGCCCG
TATCCGGATCCTGGATCTATTCATACTCCGTCCCAGTCAGTCTGGAAGAC
CGTGGCTAGGCGGGAACTGCATCTTTTGCCTGTTGGCAGCTTCACAGTTA
GCTACGCTTGGAGCTTCTTATTTACCTAGAGGTTCTCGGTTGACCAAGTC
GCGGATGCACGTAATGGTGCAGTATGGTCGCGTAGAATGTCCGTCTTTGC
GAGCAGTCCATTCATGGTCTCGGTCGGCTCGGGTTCTTTCACTTCTACTA
GCTGATTGGTGGTGGTTGCCTAGGCCGCCGCTCGATCCGCTGCGCGACGC
CGCTGCTGCAAATGGCGAATGCGATTTTTGATCACTGCCGCTGCCTTAAG
CGGATGTGTACTTCGATGTAGATGCGCCTGGTTGATAAGGAGCGCAAGCG
TCAAGGTTCGTGGTACTAATACCGCAGTGACTATCCCTGCAGTTCGCCGG
ACCGCAGCGGTCACGATCGAGGAAAAGTGAGGGCCACTGCGGGATGTACG
CAGCGGCCCACCTTGTCAGGTGAGGAAGCCAATTAGCAACTATTTTTG
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Coding sequence (CDS) from alignment at ch6:4144240..4146687-

>KJC3_013083-T1 ID=KJC3_013083-T1|Name=KJC3_013083-T1|organism=Aspergillus niger KJC3|type=CDS|length=4716bp|location=Sequence derived from alignment at ch6:4144240..4146687- (Aspergillus niger KJC3)
GCCAAGCTGGATAGTATTGTGGACTGGTCTGAAATCTGTCTTCTATTCTA
TGCCGCAGGAATGGAGGCACAAGTCTGAGCTGGCAAAGTTCCTCGAGACT
GAACAATACCTTCAAACTTTGGACTCGTCTTCTATCGTGAGCTGCCAGTT
CAATAATAAGAATCTATCCGGTCTTGCCGATACGATTACAGTCCTGCGGC
ATATCCAGAGACAACTTGTGCATATTAAAAAGCACTACAATCAGGTGAAC
AAACTGGTGGATTTTCTGGATAAATTCCTTGGTGATATTGGTTCTCTTTC
GCCAGATCAGGCTTTCCAGCGCGTGCACATTCTGCGACAGTGGCTCTTTT
GGCTTCCTCCAGTCATGCTGCGAGATGGCGTTGACGACAACCTCGGTCTA
GCGGTTCTAGCACAATTTTTTGCTGTGGGACTCAACCTGTACTGCTTATT
TCCAGAGCTAGGATGCCATGATCTTGGGCCATTGGCTGTGGGCCCTATTA
AAGAAATTGACCGTACTGTCCGTGCGCGCAACATGGCGAAGCCTCACGAC
CCGGACGTGCAACTGGCCATGTACCTCATGGGCATGCCCCAAAGTATCGC
CACCAAGTATCAGGATCGCCTTATCGCCGACGAAAGTGCTGTGGGACTAT
AAATTCTATTCTATGGCAGGCTCCGATAACTTAGTAATGAGCTCGCTCCT
CACCCTATCCACATCCTTGTTAGCTACAATCGAGCCGAAGGTGGAAACAA
AACAGACAGTTTTCTACTTTCGTCAGACTGCAATCGAGCAACTACGAATA
GCTTCTAGCAAGCTTTCAACAGAGAACTATGATAGTGTCCTTGCGGCTAC
CATCCTGTTATTATGGGCAGACAGTGAACGTGGGCGTTGCATCAAGCGCA
GCGTCTCCTGCAACTACCCAAACACAGCAGAGATTGAGAAAGGGCCTAAG
TATTGGCGGCCTATCAGACCGAAACCGAACTACTTGCCTCTAAACAAACT
CATTGATCTTATTACCAAGCTCTATGAAAGTCTGGAACAACGCGGCATGA
GAAACTACACAATCTGGGCTCAGAAGTTTCCTCTATGCCCAACTCTGGCT
GTCACCAGAACGAATCCTACATGAACTGCAGGCCATGTAAACGGTGCCAT
GAAAAATGCGATAAATCCTTGCCGCAATGGCCAAGCTGGATAGTATTGTG
GACTGGTCTGAAATCTGTCTTCTATTCTATGCCGCAGGAATGGAGGCACA
AGTCTGAGCTGGCAAAGTTCCTCGAGACTGAACAATACCTTCAAACTTTG
GACTCGTCTTCTATCGTGAGCTGCCAGTTCAATAATAAGAATCTATCCGG
TCTTGCCGATACGATTACAGTCCTGCGGCATATCCAGAGACAACTTGTGC
ATATTAAAAAGCACTACAATCAGGTGAACAAACTGGTGGATTTTCTGGAT
AAATTCCTTGGTGATATTGGTTCTCTTTCGCCAGATCAGGCTTTCCAGCG
CGTGCACATTCTGCGACAGTGGCTCTTTTGGCTTCCTCCAGTCATGCTGC
GAGATGGCGTTGACGACAACCTCGGTCTAGCGGTTCTAGCACAATTTTTT
GCTGTGGGACTCAACCTGTACTGCTTATTTCCAGAGCTAGGATGCCATGA
TCTTGGGCCATTGGCTGTGGGCCCTATTAAAGAAATTGACCGTACTGTCC
GTGCGCGCAACATGGCGAAGCCTCACGACCCGGACGTGCAACTGGCCATG
TACCTCATGGGCATGCCCCAAAGTATCGCCACCAAGTATCAGGATCGCCT
TATCGCCGACGAAAGTGCTGTGGGACTATAAATTCTATTCTATGGCAGGC
TCCGATAACTTAGTAATGAGCTCGCTCCTCACCCTATCCACATCCTTGTT
AGCTACAATCGAGCCGAAGGTGGAAACAAAACAGACAGTTTTCTACTTTC
GTCAGACTGCAATCGAGCAACTACGAATAGCTTCTAGCAAGCTTTCAACA
GAGAACTATGATAGTGTCCTTGCGGCTACCATCCTGTTATTATGGGCAGA
CAGTGAACGTGGGCGTTGCATCAAGCGCAGCGTCTCCTGCAACTACCCAA
ACACAGCAGAGATTGAGAAAGGGCCTAAGTATTGGCGGCCTATCAGACCG
AAACCGAACTACTTGCCTCTAAACAAACTCATTGATCTTATTACCAAGCT
CTATGAAAGTCTGGAACAACGCGGCATGAGAAACTACACAATCTGGGCTC
AGAAGTTTCCTCTATGCCCAACTCTGGCTGTCACCAGAACGAATCCTACA
TGAACTGCAGGCCATGTAAACGGTGCCATGAAAAATGCGATAAATCCTTG
CCGCAATGGCCAAGCTGGATAGTATTGTGGACTGGTCTGAAATCTGTCTT
CTATTCTATGCCGCAGGAATGGAGGCACAAGTCTGAGCTGGCAAAGTTCC
TCGAGACTGAACAATACCTTCAAACTTTGGACTCGTCTTCTATCGTGAGC
TGCCAGTTCAATAATAAGAATCTATCCGGTCTTGCCGATACGATTACAGT
CCTGCGGCATATCCAGAGACAACTTGTGCATATTAAAAAGCACTACAATC
AGGTGAACAAACTGGTGGATTTTCTGGATAAATTCCTTGGTGATATTGGT
TCTCTTTCGCCAGATCAGGCTTTCCAGCGCGTGCACATTCTGCGACAGTG
GCTCTTTTGGCTTCCTCCAGTCATGCTGCGAGATGGCGTTGACGACAACC
TCGGTCTAGCGGTTCTAGCACAATTTTTTGCTGTGGGACTCAACCTGTAC
TGCTTATTTCCAGAGCTAGGATGCCATGATCTTGGGCCATTGGCTGTGGG
CCCTATTAAAGAAATTGACCGTACTGTCCGTGCGCGCAACATGGCGAAGC
CTCACGACCCGGACGTGCAACTGGCCATGTACCTCATGGGCATGCCCCAA
AGTATCGCCACCAAGTATCAGGATCGCCTTATCGCCGACGAAAGTGCTGT
GGGACTATAAATTCTATTCTATGGCAGGCTCCGATAACTTAGTAATGAGC
TCGCTCCTCACCCTATCCACATCCTTGTTAGCTACAATCGAGCCGAAGGT
GGAAACAAAACAGACAGTTTTCTACTTTCGTCAGACTGCAATCGAGCAAC
TACGAATAGCTTCTAGCAAGCTTTCAACAGAGAACTATGATAGTGTCCTT
GCGGCTACCATCCTGTTATTATGGGCAGACAGTGAACGTGGGCGTTGCAT
CAAGCGCAGCGTCTCCTGCAACTACCCAAACACAGCAGAGATTGAGAAAG
GGCCTAAGTATTGGCGGCCTATCAGACCGAAACCGAACTACTTGCCTCTA
AACAAACTCATTGATCTTATTACCAAGCTCTATGAAAGTCTGGAACAACG
CGGCATGAGAAACTACACAATCTGGGCTCAGAAGTTTCCTCTATGCCCAA
CTCTGGCTGTCACCAGAACGAATCCTACATGAACTGCAGGCCATGTAAAC
GGTGCCATGAAAAATGCGATAAATCCTTGCCGCAATGGCCAAGCTGGATA
GTATTGTGGACTGGTCTGAAATCTGTCTTCTATTCTATGCCGCAGGAATG
GAGGCACAAGTCTGAGCTGGCAAAGTTCCTCGAGACTGAACAATACCTTC
AAACTTTGGACTCGTCTTCTATCGTGAGCTGCCAGTTCAATAATAAGAAT
CTATCCGGTCTTGCCGATACGATTACAGTCCTGCGGCATATCCAGAGACA
ACTTGTGCATATTAAAAAGCACTACAATCAGGTGAACAAACTGGTGGATT
TTCTGGATAAATTCCTTGGTGATATTGGTTCTCTTTCGCCAGATCAGGCT
TTCCAGCGCGTGCACATTCTGCGACAGTGGCTCTTTTGGCTTCCTCCAGT
CATGCTGCGAGATGGCGTTGACGACAACCTCGGTCTAGCGGTTCTAGCAC
AATTTTTTGCTGTGGGACTCAACCTGTACTGCTTATTTCCAGAGCTAGGA
TGCCATGATCTTGGGCCATTGGCTGTGGGCCCTATTAAAGAAATTGACCG
TACTGTCCGTGCGCGCAACATGGCGAAGCCTCACGACCCGGACGTGCAAC
TGGCCATGTACCTCATGGGCATGCCCCAAAGTATCGCCACCAAGTATCAG
GATCGCCTTATCGCCGACGAAAGTGCTGTGGGACTATAAATTCTATTCTA
TGGCAGGCTCCGATAACTTAGTAATGAGCTCGCTCCTCACCCTATCCACA
TCCTTGTTAGCTACAATCGAGCCGAAGGTGGAAACAAAACAGACAGTTTT
CTACTTTCGTCAGACTGCAATCGAGCAACTACGAATAGCTTCTAGCAAGC
TTTCAACAGAGAACTATGATAGTGTCCTTGCGGCTACCATCCTGTTATTA
TGGGCAGACAGTGAACGTGGGCGTTGCATCAAGCGCAGCGTCTCCTGCAA
CTACCCAAACACAGCAGAGATTGAGAAAGGGCCTAAGTATTGGCGGCCTA
TCAGACCGAAACCGAACTACTTGCCTCTAAACAAACTCATTGATCTTATT
ACCAAGCTCTATGAAAGTCTGGAACAACGCGGCATGAGAAACTACACAAT
CTGGGCTCAGAAGTTTCCTCTATGCCCAACTCTGGCTGTCACCAGAACGA
ATCCTACATGAACTGCAGGCCATGTAAACGGTGCCATGAAAAATGCGATA
AATCCTTGCCGCAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013083KJC3_013083Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013083-T1KJC3_013083-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013083-T1.cdsKJC3_013083-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013083-T1.utr3p1KJC3_013083-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013083-T1.exon5KJC3_013083-T1.exon5Aspergillus niger KJC3exon
KJC3_013083-T1.exon4KJC3_013083-T1.exon4Aspergillus niger KJC3exon
KJC3_013083-T1.exon3KJC3_013083-T1.exon3Aspergillus niger KJC3exon
KJC3_013083-T1.exon2KJC3_013083-T1.exon2Aspergillus niger KJC3exon
KJC3_013083-T1.exon1KJC3_013083-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013083-T1.utr5p1KJC3_013083-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4144240..4146687 -
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