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KJC3_013084-T1, KJC3_013084-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013084-T1
Unique NameKJC3_013084-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4170443..4176394-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013084-T1 ID=KJC3_013084-T1|Name=KJC3_013084-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5952bp|location=Sequence derived from alignment at ch6:4170443..4176394- (Aspergillus niger KJC3)
CTGAACCGCCCGACCGCGACGAACGCGAAAACTCGCCACCGCGATTGGTG
AGGCCGAAACGCACGACAAGACCACCAGCCCACTATGCTCAAGAGCAAGA
GATCGATACTGAGCAGAGAAACACGCGCTCCCAGCGAAAGAAGAAGAACC
AGGGTAAGCCAGTCGCCCAACGTGACGCGGCGACTTCGGACGACTCCTCG
GCAGAGAGCGAGGACCCAGACACCTCCAAACTTGTGAAAGAGATTGTTAA
GCTCAGGAGAGAAATCAGACGACGAGATGAGTTACACAAGGAGGAGCTCC
ACAGAGTCAAAGAAGAGTTTGGCGCTGCCCTCGCAGAGTTTCGACATGAA
TTACAGACCTTGGCGAATCGACCCTCGACACCGCAACCCCACCCCGAGTC
ATGCGCTCAGAACAGCCACGAGGAGATCCTTCGCGAAATCCAATCCTTGC
GCATTGCAGTCAATCCTTCGGGATCCCCGTCCTATGCAGATGTCGCCCGT
ACTCCCCCAACCAGCCAACCGAGTAATATACGGACTCTCTCATCGTGGAA
CACGACACCGACTACCTTCACCGACACGCTATATTGCACGATAGACACCT
CGAAAATGGCAGATACTGAAAATGAGAGACCATCAGCAGGTCCAATTAGA
ACGGCAGTTGAGGCTGAGATCCGGACAATGGAAAACTACACGAACTGGCG
GTGCCGCGCTGTCACGGTGGACCCGAAGAACACCAGCCGGATCAGAATTG
CTTGCCGAGATGAGGCTGAACACCAGCTGGTTAAGAAGGTGGCAGAAACC
AAGGTCGGCACAGGAGCCCGAGTGCTTCGTGACGAACTGTATCCGATCAA
AGTTGACAGCGTCAACAGAACTGCAGTGCTTGATGAAAACGGTGACATCC
GAGCAGGAGCTGCGGCAGCCTTTGGCGAAGAGAACGAAGCTTCCATCGCT
AAGATTGCATGGCTCAGCAGAAAGGAGAATGCGAAGGCTTACGGGTCAAT
GGTCGTTTACCTGACCAGAGGCAGTGATGCACGGAGGCTCCTGGCCGACG
GGTTCTTTCACGCTGGGGGAGAATCCGGCGTGACCAGCACCTTTGAATAC
CGACCCCGACCGATGCAATGCTATAATTGCCAAGAGATTGGGCATAAGGC
GTTCCAGTGCAAGAACGCGCAGAAATGTGCAAAATGTGCCGCGGAGGGCC
ATCACCACAGTAGCTGCGACCAAACGATTCCAAAGTGCATTCCATGCGGA
GGCCCCCACGAATCGTACAGCAAAAACTGTCGGAAGCTCTACCCATCGCA
TCATGAATAAGACTCTTCGAGTTATTCAACTGAATGTGAGTAAACAGGGC
GCAGTGCACGAGAGCTTAATGAATGACGAAGAGACTCAAAACGCGGTGGC
ATTAGCGGTTCAGGAACCCCAAGCGCGGAGGGTTCAAGGCCGGCTCTTGA
CCACCCCGATGGGACACCACAAATGGACGAAGATGGTTCCCTCTACGTGG
AGGGAAGGCAGGTGGGCGATTCGAAGCATGCTCTGGATTAACAAAGATGT
CGAGGCGGAACAAGTGCCAATAGAGTCCCCGGATCTCACGGCAGCGGTTA
TTAGGCTTCCCGAGCGACTGATTTTCATGGCATCAGTTTACGTGGAAGGG
GACAATGCCTCAGCTTTGGACGATACATGCAAATACTTAATCAACGCGAT
CACGAAAGTACGGCGAGACACGGGTGCGGTGGTGGAGGTTTTGATTATGG
GAGACTTCAACCGGCATGACCAACTCTGGGGAGGAGATGACGTGTCTTTG
GGAAGACAAGGCGAAGCGGACCCAATCATCAATCTCATGAGCGAATACGC
TCTCAGCAGTCTCCTCAAACGGGGCACAAAGACATGGCATGGCGGAGGAT
ACAGCGGGGACACTGAGTCGACGATCGACCTGGTCCTGGCCTCGGACAAC
CTAACAGAGTCCGTGATCAAGTGTGCTATACTCGGGACGGAGCACGGCTC
GGACCACTGCGCTATTGAGACCGTCTTTGATGCGCCCTGGTCGCTCCCAC
AGCATCAGGGACGACTTCTGTTGAAAAATGCTCCATGGAAAGAGATCAAT
GCCAGGATAGCGAACACTCTTGCCGCCACTCCGGCGGAGGGCACAGTGCA
GCAGAAAACCGACCGGCTCATGTCGGCTGTCTCGGAAGCGGTGCATGCGT
TAACACCAAAGTCAAAACCATCACCACACGCGAAGCGGTGGTGGACCGCT
GATTTAACGCAGCTCCGTCACATATACACATACTGGAGAAATCACGCCCG
CTCCGAGCGACGGGCGGGACAAAAAGCACCCTACCTGGAGACGATGGCCC
GAGGCGCGGCAAAACAATACCATGATGCCATCCGGCAACAAAAGAAAAAG
CACTGGAATCAATTTCTTGCCGACAATGATAACATATGGAAAGCCGCTAG
ATACCTGAAGTCGGGAGAAGACGCAGCGTTCGGGAAGATCCCGCAACTCC
TCAGAGCGGATGGGACCACGACCAGCGATCACACGGAGCAGGCAGAAGAA
TTGCTGATCAAATTCTTCCCGCCCCTGCCGGACAATATTGACGATGAAGG
GACTCGACCACAAAGAGCGCCAGTTGAGATGCCTGCCATCACGATGGAGG
AGATCGAACGACAGCTGATGGCGGCAAAGTCTTGGAAGGCACCCGGCGAA
GACGGTCTGCCAGCAATAGTCTGGAAGATGACGTGGCCCACGGTCAAGCA
CAGAGTCCTGGATCTCTTCCAGGCGTCGCTGGAAGAAGGCACGTTGCCAA
GACAGTGGAGACATGCGAAGATCATACCGCTCAAAAAGCCGAACAAAGAG
AACTACACCATTGCCAAAGCATGGAGACCGATTTCGCTCCTCGCGACGCT
GGGCAAGATACTGGAATCTGTGGTCGCAGAAAGGATCTCACACGCGGTGG
AGACTTATGGGTTGCTCCCGACCAGCCACTTCGGCGCCCGAAAGCAGCGG
TCCGCGGAGCAAGCACTCGTACTCCTGCAAGAGCAAATCTACGCGGCGTG
GCGTGGCCGACGGGTCGTAAGCTTGATCAGCTTCGATGTCAAGGGAGCCT
ACAATGGAGTGTGCAAAGAACGGCTGCTTCAGAGAATGAAAGCGCGAGGC
ATACCGGAGAATCTACTCCGGTGGGTTGAGGCGTTCTGCTCGGAACGAAC
GGCGACCATCCAAATCAATGGGCAACTATCTGAGACCCACAGCCTGCCAC
AGGCTGGACTGCCGCAGGGCTCGCCGCTGTCCCCAATCCTGTTTCTCTTC
TTCAACGCAGACCTCGTACAACGTCAAATCGACGGCAAGGGAGGTGCGAT
TGCGTTCGTAGATGATTTTACCGCGTGGGTGACCGGACCAAGTGCGCAGA
GTAATCGGGAAGGTATTGAAGCTATTATCAATGAAGCACTTGACTGGGAG
AAAAGGAGCGGCGCGACTTTCGAAGCGGACAAAACAGCCATTATACACTT
CACTCCCAAGGCGTACAAATCGGACAAGGGGCCCTTCACCGTCAAGGGAC
AAACGGTGGAACCCAAAGACCACGTCAAGATTCTGGGCGTCCTCATGGAC
ACAAGTCTCAAATACAAGGAACACATTGCAAGGGCAGCGTCCAAGGGCCT
TGAGGCAGTGATGGAGCTTCGACGACTTCGAGGTCTGTCCCCATCAACAG
CGCGGCAGCTATTCACATCGACAGTGGCACCCGTAGTGGACTACGCGTCT
AATGTCTGGATGCATGCATTCAAAAATAAGGCCACGGGGCCGATCAACCG
AGTCCAAAGGGTGGGGGCGCAGGCAATCGTCGGGACCTTTCTCACCGTTG
CAACCAGCGTCGCGGAGGCAGAGGCTCACATTGCCACGGCGCAACACCGG
TTTTGGAGGCGGGCCGTGAATATATGGACGGACCTCCACACGCTCCCGGA
TACCAATCCGCTCCGCCGAACTACAGCTCGGATCAGGAAATTCAGACGGT
TTCACCGTTCGCCGCTGTACCAAGTGGCAGACGCGCTGAAGAACATTGAT
ATGGAAACACTGGAGACTATTAACCCGTTTACATTAGCACCATGGGAGAC
ACGTATACAGACTGATGGTGAAGCCATGCCGGACCCACAGTCTGTACCGG
GTGGGTCAATACAGATCGCGATCAGCAGCTCAGCACGGAACGGGTTTGTA
GGATTTGGGGTAGCAATCGAAAAGCAGCCACCTCAATATCGAAAACCGAG
ATTGAAGACCTTTTCCATGACCCTGGGCGCAAGATCAGAGCAGAATCCGT
TCTCCGCAGAGCTAGCGGCTATAGGTCATACATTGAACGGGCTGGTGGGA
CTGAAAGGTTTCAGGCTCAGGTTGCTCACCAGCAACAAAGCTGCAGCCCT
CACGTTACAGAACCCTCGACAACAGTCAGGCCAGGAGTTCGTCTGCCAGA
CGTACAAGTTAATAAACAGACTGCGGAGAAAAGGAAACCATATCAAGATT
CGTTGGGTCCCTACCAGCGAAGACAACAAATTACTGGGCCTAGCTAAGGA
ACAGGCCAGGGCCGCGACCCATGAGGACGCTATCCCACAAGCACAGGTTC
CCAGAATGAAGTCAACAACGTTGAATCTCGCACGATCCCAAGCAGTCACC
ACGAAAGCCTTGCCGGAGGACGTAGGGAGGCACGTCAAACGAGTGGATTC
AGCACTCCCAGGAAAGCACACCCGGCAGCTGTATGACGGATTATCGTGGA
AAGAAGCGACCGTGCTGGCTCAACTTCGGACCGGCATGGCAAGATTAAAT
GGGTATCTCTACCGAATAAATGTCGCGCAGACAGACCAGTGTGCATGCGG
ACAAGCAAAAGAAACCGTGGAGCATTTCCTCTTCCGGTGTCGGAAGTGGA
CTACGCAACGGATCGCACTGCTACAATGTACTCGAACTCAGCGGGGCAAT
CTCTCCCTCTGCCTGGGCGGGAAATCGCCATCCGATGATCAGCAATGGAC
GCCGAACTTGGAGGCAGTACGGTCCTCGATACGATTTGCCATCGCCACGG
GCCGACTCGACGCCACCTAACCATATCAACCAAGACAATGACACCCTTCC
CCTAACTAACCTACACCAACCGCCTTGTGCCACAGATGGTAGACGCGCTT
CAACTGCCGAGGATAGGATGTTGAACACTTGAAGAAGGGCCTTCAAGCCA
GTCTACTAACAAATATACAAACCCACAGGGAATCCTACGATAGTGACAGC
TGAGAGGACATATACTGACAGGATTTATGTATGGGCTCGAAGGAGACACC
GCAGATGTACAATAGAACCGGTGTTGATAGATCAGTGATAGCTGCCCCTT
CGGCTCAGCCGCCGGGCGTTAATGAATTGTGTGTGTGTATGACATGACGA
CTCTCTTTGCGCGCAGCCAATGCCATGTGGCAATGGCATCCATCGCTGCT
TTTCGTCTTCTCCCTACAGTCCGATTCCTACGCGCTCAACACAGACCGTC
ACCGATTCTAAATTACCTCGTCCATCGGTTGGTGAACGGTCCAATCGATT
GCGGGCTCCCCTCCCTTCCTCGGTAAGCCTTTGATGCTGGCACATCTGTT
GTGCCGCCGCGAACAGGTTCCCCAAGGATACCCTGTGAAGTCCTGCCAAT
GCTTACCATGACAGGTCGAAGAGCTACAGCCACTACAGTGCTCACATCGC
GATCGCTTAACACTGCTCTGTTGCGGTAAGCTGATGCATGTGGCATTGCA
CGGGCAGTCCTCAGCGGTCATTAAGCAGCCTTGGATCATGCGATGGCGAA
TGCACAAGGGCACCCAACCGGAGCCGTGTCCGATCGCTGTCGGGATATGC
TACGCTGGAGCCTAGCGAGCATATACAAATTCTTTCTCTGTGTTGGATTG
CCTCGAAGACTCCATGCATCCACTGATATTGTCACAACGGCCAGAACATC
CC
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Coding sequence (CDS) from alignment at ch6:4170443..4176394-

>KJC3_013084-T1 ID=KJC3_013084-T1|Name=KJC3_013084-T1|organism=Aspergillus niger KJC3|type=CDS|length=3768bp|location=Sequence derived from alignment at ch6:4170443..4176394- (Aspergillus niger KJC3)
ATGAATAAGACTCTTCGAGTTATTCAACTGAATGTGAGTAAACAGGGCGC
AGTGCACGAGAGCTTAATGAATGACGAAGAGACTCAAAACGCGGTGGCAT
TAGCGGTTCAGGAACCCCAAGCGCGGAGGGTTCAAGGCCGGCTCTTGACC
ACCCCGATGGGACACCACAAATGGACGAAGATGGTTCCCTCTACGTGGAG
GGAAGGCAGGTGGGCGATTCGAAGCATGCTCTGGATTAACAAAGATGTCG
AGGCGGAACAAGTGCCAATAGAGTCCCCGGATCTCACGGCAGCGGTTATT
AGGCTTCCCGAGCGACTGATTTTCATGGCATCAGTTTACGTGGAAGGGGA
CAATGCCTCAGCTTTGGACGATACATGCAAATACTTAATCAACGCGATCA
CGAAAGTACGGCGAGACACGGGTGCGGTGGTGGAGGTTTTGATTATGGGA
GACTTCAACCGGCATGACCAACTCTGGGGAGGAGATGACGTGTCTTTGGG
AAGACAAGGCGAAGCGGACCCAATCATCAATCTCATGAGCGAATACGCTC
TCAGCAGTCTCCTCAAACGGGGCACAAAGACATGGCATGGCGGAGGATAC
AGCGGGGACACTGAGTCGACGATCGACCTGGTCCTGGCCTCGGACAACCT
AACAGAGTCCGTGATCAAGTGTGCTATACTCGGGACGGAGCACGGCTCGG
ACCACTGCGCTATTGAGACCGTCTTTGATGCGCCCTGGTCGCTCCCACAG
CATCAGGGACGACTTCTGTTGAAAAATGCTCCATGGAAAGAGATCAATGC
CAGGATAGCGAACACTCTTGCCGCCACTCCGGCGGAGGGCACAGTGCAGC
AGAAAACCGACCGGCTCATGTCGGCTGTCTCGGAAGCGGTGCATGCGTTA
ACACCAAAGTCAAAACCATCACCACACGCGAAGCGGTGGTGGACCGCTGA
TTTAACGCAGCTCCGTCACATATACACATACTGGAGAAATCACGCCCGCT
CCGAGCGACGGGCGGGACAAAAAGCACCCTACCTGGAGACGATGGCCCGA
GGCGCGGCAAAACAATACCATGATGCCATCCGGCAACAAAAGAAAAAGCA
CTGGAATCAATTTCTTGCCGACAATGATAACATATGGAAAGCCGCTAGAT
ACCTGAAGTCGGGAGAAGACGCAGCGTTCGGGAAGATCCCGCAACTCCTC
AGAGCGGATGGGACCACGACCAGCGATCACACGGAGCAGGCAGAAGAATT
GCTGATCAAATTCTTCCCGCCCCTGCCGGACAATATTGACGATGAAGGGA
CTCGACCACAAAGAGCGCCAGTTGAGATGCCTGCCATCACGATGGAGGAG
ATCGAACGACAGCTGATGGCGGCAAAGTCTTGGAAGGCACCCGGCGAAGA
CGGTCTGCCAGCAATAGTCTGGAAGATGACGTGGCCCACGGTCAAGCACA
GAGTCCTGGATCTCTTCCAGGCGTCGCTGGAAGAAGGCACGTTGCCAAGA
CAGTGGAGACATGCGAAGATCATACCGCTCAAAAAGCCGAACAAAGAGAA
CTACACCATTGCCAAAGCATGGAGACCGATTTCGCTCCTCGCGACGCTGG
GCAAGATACTGGAATCTGTGGTCGCAGAAAGGATCTCACACGCGGTGGAG
ACTTATGGGTTGCTCCCGACCAGCCACTTCGGCGCCCGAAAGCAGCGGTC
CGCGGAGCAAGCACTCGTACTCCTGCAAGAGCAAATCTACGCGGCGTGGC
GTGGCCGACGGGTCGTAAGCTTGATCAGCTTCGATGTCAAGGGAGCCTAC
AATGGAGTGTGCAAAGAACGGCTGCTTCAGAGAATGAAAGCGCGAGGCAT
ACCGGAGAATCTACTCCGGTGGGTTGAGGCGTTCTGCTCGGAACGAACGG
CGACCATCCAAATCAATGGGCAACTATCTGAGACCCACAGCCTGCCACAG
GCTGGACTGCCGCAGGGCTCGCCGCTGTCCCCAATCCTGTTTCTCTTCTT
CAACGCAGACCTCGTACAACGTCAAATCGACGGCAAGGGAGGTGCGATTG
CGTTCGTAGATGATTTTACCGCGTGGGTGACCGGACCAAGTGCGCAGAGT
AATCGGGAAGGTATTGAAGCTATTATCAATGAAGCACTTGACTGGGAGAA
AAGGAGCGGCGCGACTTTCGAAGCGGACAAAACAGCCATTATACACTTCA
CTCCCAAGGCGTACAAATCGGACAAGGGGCCCTTCACCGTCAAGGGACAA
ACGGTGGAACCCAAAGACCACGTCAAGATTCTGGGCGTCCTCATGGACAC
AAGTCTCAAATACAAGGAACACATTGCAAGGGCAGCGTCCAAGGGCCTTG
AGGCAGTGATGGAGCTTCGACGACTTCGAGGTCTGTCCCCATCAACAGCG
CGGCAGCTATTCACATCGACAGTGGCACCCGTAGTGGACTACGCGTCTAA
TGTCTGGATGCATGCATTCAAAAATAAGGCCACGGGGCCGATCAACCGAG
TCCAAAGGGTGGGGGCGCAGGCAATCGTCGGGACCTTTCTCACCGTTGCA
ACCAGCGTCGCGGAGGCAGAGGCTCACATTGCCACGGCGCAACACCGGTT
TTGGAGGCGGGCCGTGAATATATGGACGGACCTCCACACGCTCCCGGATA
CCAATCCGCTCCGCCGAACTACAGCTCGGATCAGGAAATTCAGACGGTTT
CACCGTTCGCCGCTGTACCAAGTGGCAGACGCGCTGAAGAACATTGATAT
GGAAACACTGGAGACTATTAACCCGTTTACATTAGCACCATGGGAGACAC
GTATACAGACTGATGGTGAAGCCATGCCGGACCCACAGTCTGTACCGGGT
GGGTCAATACAGATCGCGATCAGCAGCTCAGCACGGAACGGGTTTGTAGG
ATTTGGGGTAGCAATCGAAAAGCAGCCACCTCAATATCGAAAACCGAGAT
TGAAGACCTTTTCCATGACCCTGGGCGCAAGATCAGAGCAGAATCCGTTC
TCCGCAGAGCTAGCGGCTATAGGTCATACATTGAACGGGCTGGTGGGACT
GAAAGGTTTCAGGCTCAGGTTGCTCACCAGCAACAAAGCTGCAGCCCTCA
CGTTACAGAACCCTCGACAACAGTCAGGCCAGGAGTTCGTCTGCCAGACG
TACAAGTTAATAAACAGACTGCGGAGAAAAGGAAACCATATCAAGATTCG
TTGGGTCCCTACCAGCGAAGACAACAAATTACTGGGCCTAGCTAAGGAAC
AGGCCAGGGCCGCGACCCATGAGGACGCTATCCCACAAGCACAGGTTCCC
AGAATGAAGTCAACAACGTTGAATCTCGCACGATCCCAAGCAGTCACCAC
GAAAGCCTTGCCGGAGGACGTAGGGAGGCACGTCAAACGAGTGGATTCAG
CACTCCCAGGAAAGCACACCCGGCAGCTGTATGACGGATTATCGTGGAAA
GAAGCGACCGTGCTGGCTCAACTTCGGACCGGCATGGCAAGATTAAATGG
GTATCTCTACCGAATAAATGTCGCGCAGACAGACCAGTGTGCATGCGGAC
AAGCAAAAGAAACCGTGGAGCATTTCCTCTTCCGGTGTCGGAAGTGGACT
ACGCAACGGATCGCACTGCTACAATGTACTCGAACTCAGCGGGGCAATCT
CTCCCTCTGCCTGGGCGGGAAATCGCCATCCGATGATCAGCAATGGACGC
CGAACTTGGAGGCAGTACGGTCCTCGATACGATTTGCCATCGCCACGGGC
CGACTCGACGCCACCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013084KJC3_013084Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013084-T1KJC3_013084-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013084-T1.cdsKJC3_013084-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013084-T1.utr3p2KJC3_013084-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_013084-T1.utr3p1KJC3_013084-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013084-T1.exon3KJC3_013084-T1.exon3Aspergillus niger KJC3exon
KJC3_013084-T1.exon2KJC3_013084-T1.exon2Aspergillus niger KJC3exon
KJC3_013084-T1.exon1KJC3_013084-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013084-T1.utr5p2KJC3_013084-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_013084-T1.utr5p1KJC3_013084-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR043502
DBxrefInterPro:IPR036691
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR000477
DBxrefInterPro:IPR005135
DBxrefPFAM:PF00078
DBxrefPFAM:PF14529
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4170443..4176394 -
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