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KJC3_013085-T1, KJC3_013085-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013085-T1
Unique NameKJC3_013085-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4182617..4183944-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013085-T1 ID=KJC3_013085-T1|Name=KJC3_013085-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1328bp|location=Sequence derived from alignment at ch6:4182617..4183944- (Aspergillus niger KJC3)
CCAACATCTCCCATCTCCCATCTCCCATCTCCCATCTGCCAGATCCAACT
TCCGCTCCGTCAGAGACAATGCCTCCAGCCCTCTCAGACCTATATGAACA
GGCCAGCCAAATCCAATCCGTTGAGTGGTACGGGATATTGGTTGCTGCCC
TGCTGGGCGTCTGGCTGATCGCGCGGTTGGCGTACCAGCTTGGTCGGTGG
ACTGTCCAACGCACATCGCGGCCTCCCTTGGACGGCGTCTCGGCCGCGAG
TTGCCGTGGCTTCTCCAGACTATTGACATCGCCACCGCTCTCGAGGCGAG
CTTGGTTGGGGTGCTCTTGGGCGCCAACATCGTCCTCCTACTCGTGTCCG
CCCATTCCCTGCTTCATGGAGCCATTGCCATCGCCAGAGCGGATAAGCCG
ACCCCCTCGATGAGGCATGACTGGGTTCCCTTGCTGGTCAGTCACCACGC
CGCCCCTCCATGATGATGACTGTGACCTGAGAGCCATACGTACCACTAAC
CAGAGCTAGGGAGCTGCTGCCATTCTGATGATGATCCCCGTGACCTTGCA
TGCGGTCGTCCGACGGCACTGTCAGGTCGCCATGAAAATTCACTACTTTC
TGACGGTGACGGCAATGGTGGCCCTGGTGCATCATACGTGGGACCAAGGG
CCAGAATCCCGCTGGCAAGTAGTTGGTGCTGAGGCCCTATGGATCGTGCT
GAGTGTCGTTGCCGTTTTTCATGCCGTTTCCGTCCAACAACGTTGGAGTG
CTGGACGGCCCACCGTAACCATATATCGCTTTCATGGGCTGCTTCGCTTG
AACATTACAGTGTCCCCCCATCGGCACATCCGGCCGGGGCAGTACATATA
CCTCTGGTTACCTCACGCAGGATTTCGCTCGTGCTTCCAACTCCAGCCCT
TCTATGTCGCTTACTGGGATGATGCGCCCGAACCGCGCATCCTGTACGTT
CTGGCCCGACCACGAGCCTCCAGCCTCAGTACACGACTCTACCTCCGCGA
ATGGCTACACCAGCGTCGACAGCCCGCACTGTTGCTGGGCCCATACGGCC
GATCGATCGACTTTTCTCTGTTTGGGACGATCGTGTTCATCGTAGAGGAC
ATTGGCATGTTGCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAG
CGAGCAGCGGCGGGCCATGGTACGCAAGCTGAAAATCGTGTGGCAGATGC
AAGACTTTGGTATGGCTGTCTCTTGATGCACTGCCCGATACCGCAGTTAC
TGACAAATCCTAGACCACCAATGCTGGCTGGGCGATTGGATGCAGGGCCT
GTTGGACCTCGACCGCGGTGAATTTAAG
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Coding sequence (CDS) from alignment at ch6:4182617..4183944-

>KJC3_013085-T1 ID=KJC3_013085-T1|Name=KJC3_013085-T1|organism=Aspergillus niger KJC3|type=CDS|length=1488bp|location=Sequence derived from alignment at ch6:4182617..4183944- (Aspergillus niger KJC3)
GGAGCTGCTGCCATTCTGATGATGATCCCCGTGACCTTGCATGCGGTCGT
CCGACGGCACTGTCAGGTCGCCATGAAAATTCACTACTTTCTGACGGTGA
CGGCAATGGTGGCCCTGGTGCATCATACGTGGGACCAAGGGCCAGAATCC
CGCTGGCAAGTAGTTGGTGCTGAGGCCCTATGGATCGTGCTGAGTGTCGT
TGCCGTTTTTCATGCCGTTTCCGTCCAACAACGTTGGAGTGCTGGACGGC
CCACCGTAACCATATATCGCTTTCATGGGCTGCTTCGCTTGAACATTACA
GTGTCCCCCCATCGGCACATCCGGCCGGGGCAGTACATATACCTCTGGTT
ACCTCACGCAGGATTTCGCTCGTGCTTCCAACTCCAGCCCTTCTATGTCG
CTTACTGGGATGATGCGCCCGAACCGCGCATCCTGTACGTTCTGGCCCGA
CCACGAGCCTCCAGCCTCAGTACACGACTCTACCTCCGCGAATGGCTACA
CCAGCGTCGACAGCCCGCACTGTTGCTGGGCCCATACGGCCGATCGATCG
ACTTTTCTCTGTTTGGGACGATCGTGTTCATCGTAGAGGACATTGGCATG
TTGCGAGTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCG
GCGGGCCATGGTACGCAAGCTGAAAATCGTGTGGCAGATGCAAGACTTTG
GTATGGCTGTCTCTTGAATGAGGCATGACTGGGTTCCCTTGCTGGGAGCT
GCTGCCATTCTGATGATGATCCCCGTGACCTTGCATGCGGTCGTCCGACG
GCACTGTCAGGTCGCCATGAAAATTCACTACTTTCTGACGGTGACGGCAA
TGGTGGCCCTGGTGCATCATACGTGGGACCAAGGGCCAGAATCCCGCTGG
CAAGTAGTTGGTGCTGAGGCCCTATGGATCGTGCTGAGTGTCGTTGCCGT
TTTTCATGCCGTTTCCGTCCAACAACGTTGGAGTGCTGGACGGCCCACCG
TAACCATATATCGCTTTCATGGGCTGCTTCGCTTGAACATTACAGTGTCC
CCCCATCGGCACATCCGGCCGGGGCAGTACATATACCTCTGGTTACCTCA
CGCAGGATTTCGCTCGTGCTTCCAACTCCAGCCCTTCTATGTCGCTTACT
GGGATGATGCGCCCGAACCGCGCATCCTGTACGTTCTGGCCCGACCACGA
GCCTCCAGCCTCAGTACACGACTCTACCTCCGCGAATGGCTACACCAGCG
TCGACAGCCCGCACTGTTGCTGGGCCCATACGGCCGATCGATCGACTTTT
CTCTGTTTGGGACGATCGTGTTCATCGTAGAGGACATTGGCATGTTGCGA
GTGCTTCCCTATATCCGCATGCTCGTCCAGGCGAGCGAGCAGCGGCGGGC
CATGGTACGCAAGCTGAAAATCGTGTGGCAGATGCAAGACTTTGGTATGG
CTGTCTCTTGAATGAGGCATGACTGGGTTCCCTTGCTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013085KJC3_013085Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013085-T1KJC3_013085-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013085-T1.cdsKJC3_013085-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013085-T1.utr3p1KJC3_013085-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013085-T1.exon2KJC3_013085-T1.exon2Aspergillus niger KJC3exon
KJC3_013085-T1.exon1KJC3_013085-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013085-T1.utr5p1KJC3_013085-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR039261
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4182617..4183944 -
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