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KJC3_013086-T1, KJC3_013086-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013086-T1
Unique NameKJC3_013086-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4210155..4212943-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013086-T1 ID=KJC3_013086-T1|Name=KJC3_013086-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2789bp|location=Sequence derived from alignment at ch6:4210155..4212943- (Aspergillus niger KJC3)
ATTTGGTGTAGTTGACACGCGCCCTAATTTCCGATAGATGTGACGCTTAG
ACGGACTTATGTTGAGCTTATGGGCTCTCCCCATCTATTCAGCTCCATAA
GTATCAAGGACTATCTTATCCAACTGCCACATTCTCTGATAATTCTAGAT
GGGTTTCATGGGTTTTTTGGGTCTGACTGGGTTTTGGGTACCCGCCCATA
CCCATTCGTACGGCGACGCGGTCTGACGCGCCACTAATTCGATATATCCA
AAATCCATAGTGAGGAAAAAGAAAAGAAAAAACCAAAGGCGCGAGACAAG
AACCAGCTCATCATCCTCTAAAACTGAGAATCTTTCTCTAAGCTATCCAT
ATTCATTGAGTTGGGACAGCAAAAACCGCCAGCCATTTATCATGACCTCA
TCCAGTTCTACTTCAGCGAGGCTTATGTCCTTTCCATTTAGCTCTCTGAC
GCCAATTGAGGCGCCCTTAGACTCTGTTCCTTCGTCCGATTTTCCCTCCT
CGGTATGTTGTGGCTCTATCGTTCGAGCCTATCGATACCCTCAAGACCTT
GGACATAGGCTGACCTGGACCGAAGCCCTTTCTTAGTCCAAGACGGAGCC
ATATTTTCTCTCCGGGTGATCCTCCGACTAGCCTTAAGTGCATCGGTCCT
GACCGGAAAAAGAAATGGATTTTATACGACGCGGATTATGAGAGCGATTT
TTTCTCATGGTGGTTGCAGACCGAGTACGGGAGACAGCTGAACGGAAATG
GCAGATCTAAGATCAGGTGGTCAATCGAGACGCGCTTCGCTGATGTTTGG
AATTACTTTGACCAGGTGGCGGAGATACATACAGGTCGCCCAAAGGTTAT
CTGCAAGTCCTGTCTGACCTTACTGGATCATCCGCATCACAAGTCCCACG
GCACAAGCGCTATGGGAAGACACCAGAAGTCAAGTAGCTGCCGAAAAGGA
AAAAAACGGATAGCCCAGCAGACATTCATTGAAGACTCCATCCAACAGCC
TGCAGCAACTACTATAAGTAGGGTTCGGTTTACGAAGGATCAACTGGAAG
AGCAGCTTTTAATGACTATAACAAGCCTGCGGCTCCCTTTCCAGGTGGTA
GAGAATAGTGCATTCCAACAATTATTGAATCTGATCCACTCTGGTACTGA
TCGATTAGAGCTCCCGTCTGCGAAGACGCTTCGTCGCCGCTTGCGTGATG
CTGTGGTTGAACAACATACCTCCCAACTGAACGATTTACCTGAGGGCGCT
AAAGTATCACTTGCTTTAGATTGTTGGACCAGCCCCTTTCAGCAGGCATT
TATGGCAATCACAGCCTACTTTATCGACAGTGATTGGAATTATCGAGAAC
TTCTTCTTGGCTTTGAGCCGTTACACGGTCCCCATTCAGGGAGCAACCTG
AGCGATGTATTGCTGGACCTATTACGAGATCGACACCTCGTGGATCGAAT
CTTTACGGTGACCACAGATAATGCAACCAATAATGATACTTTGATCCGGG
GCTTGCAGGATGTATTGCTTGCCACAGGTGCAATCAACTCTCGCGACTCT
ATTATTCGTGTCCCTTGTATGGCTCATGTTATCCAACTATGCCTCAAGCA
ACTCTTGGGGCATATCAAGGCGGCGCCTAAGAACGATGAAGTTAGCACCT
TATGGTCAGACGCCCAATCCAGCTTTCTAAAGGATTCGGCAGATTGTGGG
GATGTTGCCCACACACTTACAAAGGTTCGTCTCTGTCTAGAAGGAAATTG
AGTCACACTGTAACTTTCATAGGTCCGGTCACTTGCAGTCTTTGTTAATG
CCAGTCCTCAACGACGGGACGCCTTTATTGCTCTACAGCCTGTTCATGAC
CAACTTTTCCCACTACAGGACGTACAAACACGCTGGAACTCGACGTTCCT
AATGTTGCGACGAGCGCGGAAACTACGAAACTGTTTCGATCAGTATTGCA
CGGATCACGATTATGTGCAGTTCAAGATTAGCGATGCTGAATGGCGGCAA
ATTGATTACCTTCTCCAATTGACGAAGCCCTTCTTCCAGTTCACAATGGC
CCTTATGAAAACACGGGATGTAACCATTCATAGCGTTTTTCTGGTCTACA
GAAAGCTCCTGGAGCATATTGAGAAGTCCACAAGGGTTTTGAGCAGGAAG
ACAACTCCGTGGAAAAGAGCTATGCATGATGCCTTGCTTGCAGCCAAACA
GAAATTGAGGGAATACTATGACAAGACTTACCGGGACCATATATTTCTGT
ACGCCACGGGGACAATGCTTGCCCCGCAGTACAAGCTCTCTGCTTTTGGT
GATACAGAATACTCGAAATGCCATAGTGAAACATTGAGAACCTACCGAAG
TTACCTGAGGAAAGGCTTTCACCAATACCAACAGCAGATCCCAGATCTAT
CTTTCTGTACCACCATACATCGTTCCCAGCAACAGACATCAGAGTTAGAC
CAGCTACTCGTGCCGCGTATCTCTTTGCCGAATGATAGGAACCAGCTGGA
CGAGGTTGATCGGTATCTCCAAGAAGGTAAGGCCTTGGTCGGTGTATATT
TTGCTTTTGAGTGGCGATTGACCTTCCAAGGGATTGTGCCGCTTCCGCCC
CGGGCGTACTGGAAGGAACATGAACATGAATTCCCTGTTCTTTCACGTTT
AGCGCGCGACCTGCTCGCCGTGCCAGCCACCGGTGCAGGAGTTGAACGCC
TCTTCAATAGTGCTAGAGATATCTGCCACTATCGCCGAGGATCTCTCCAC
GAAAAGACCATCCAGGACCTGATGATGCATATGTGTGCC
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Coding sequence (CDS) from alignment at ch6:4210155..4212943-

>KJC3_013086-T1 ID=KJC3_013086-T1|Name=KJC3_013086-T1|organism=Aspergillus niger KJC3|type=CDS|length=2574bp|location=Sequence derived from alignment at ch6:4210155..4212943- (Aspergillus niger KJC3)
CCCTTTCTTAGTCCAAGACGGAGCCATATTTTCTCTCCGGGTGATCCTCC
GACTAGCCTTAAGTGCATCGGTCCTGACCGGAAAAAGAAATGGATTTTAT
ACGACGCGGATTATGAGAGCGATTTTTTCTCATGGTGGTTGCAGACCGAG
TACGGGAGACAGCTGAACGGAAATGGCAGATCTAAGATCAGGTGGTCAAT
CGAGACGCGCTTCGCTGATGTTTGGAATTACTTTGACCAGGTGGCGGAGA
TACATACAGGTCGCCCAAAGGTTATCTGCAAGTCCTGTCTGACCTTACTG
GATCATCCGCATCACAAGTCCCACGGCACAAGCGCTATGGGAAGACACCA
GAAGTCAAGTAGCTGCCGAAAAGGAAAAAAACGGATAGCCCAGCAGACAT
TCATTGAAGACTCCATCCAACAGCCTGCAGCAACTACTATAAGTAGGGTT
CGGTTTACGAAGGATCAACTGGAAGAGCAGCTTTTAATGACTATAACAAG
CCTGCGGCTCCCTTTCCAGGTGGTAGAGAATAGTGCATTCCAACAATTAT
TGAATCTGATCCACTCTGGTACTGATCGATTAGAGCTCCCGTCTGCGAAG
ACGCTTCGTCGCCGCTTGCGTGATGCTGTGGTTGAACAACATACCTCCCA
ACTGAACGATTTACCTGAGGGCGCTAAAGTATCACTTGCTTTAGATTGTT
GGACCAGCCCCTTTCAGCAGGCATTTATGGCAATCACAGCCTACTTTATC
GACAGTGATTGGAATTATCGAGAACTTCTTCTTGGCTTTGAGCCGTTACA
CGGTCCCCATTCAGGGAGCAACCTGAGCGATGTATTGCTGGACCTATTAC
GAGATCGACACCTCGTGGATCGAATCTTTACGGTGACCACAGATAATGCA
ACCAATAATGATACTTTGATCCGGGGCTTGCAGGATGTATTGCTTGCCAC
AGGTGCAATCAACTCTCGCGACTCTATTATTCGTGTCCCTTGTATGGCTC
ATGTTATCCAACTATGCCTCAAGCAACTCTTGGGGCATATCAAGGCGGCG
CCTAAGAACGATGAAGTTAGCACCTTATGGTCAGACGCCCAATCCAGCTT
TCTAAAGGATTCGGCAGATTGTGGGGATGTTGCCCACACACTTACAAAGG
TTCGTCTCTGTCTAGAAGGAAATTGAATGACCTCATCCAGTTCTACTTCA
GCGAGGCTTATGTCCTTTCCATTTAGCTCTCTGACGCCAATTGAGGCGCC
CTTAGACTCTGTTCCTTCGTCCGATTTTCCCTCCTCGCCCTTTCTTAGTC
CAAGACGGAGCCATATTTTCTCTCCGGGTGATCCTCCGACTAGCCTTAAG
TGCATCGGTCCTGACCGGAAAAAGAAATGGATTTTATACGACGCGGATTA
TGAGAGCGATTTTTTCTCATGGTGGTTGCAGACCGAGTACGGGAGACAGC
TGAACGGAAATGGCAGATCTAAGATCAGGTGGTCAATCGAGACGCGCTTC
GCTGATGTTTGGAATTACTTTGACCAGGTGGCGGAGATACATACAGGTCG
CCCAAAGGTTATCTGCAAGTCCTGTCTGACCTTACTGGATCATCCGCATC
ACAAGTCCCACGGCACAAGCGCTATGGGAAGACACCAGAAGTCAAGTAGC
TGCCGAAAAGGAAAAAAACGGATAGCCCAGCAGACATTCATTGAAGACTC
CATCCAACAGCCTGCAGCAACTACTATAAGTAGGGTTCGGTTTACGAAGG
ATCAACTGGAAGAGCAGCTTTTAATGACTATAACAAGCCTGCGGCTCCCT
TTCCAGGTGGTAGAGAATAGTGCATTCCAACAATTATTGAATCTGATCCA
CTCTGGTACTGATCGATTAGAGCTCCCGTCTGCGAAGACGCTTCGTCGCC
GCTTGCGTGATGCTGTGGTTGAACAACATACCTCCCAACTGAACGATTTA
CCTGAGGGCGCTAAAGTATCACTTGCTTTAGATTGTTGGACCAGCCCCTT
TCAGCAGGCATTTATGGCAATCACAGCCTACTTTATCGACAGTGATTGGA
ATTATCGAGAACTTCTTCTTGGCTTTGAGCCGTTACACGGTCCCCATTCA
GGGAGCAACCTGAGCGATGTATTGCTGGACCTATTACGAGATCGACACCT
CGTGGATCGAATCTTTACGGTGACCACAGATAATGCAACCAATAATGATA
CTTTGATCCGGGGCTTGCAGGATGTATTGCTTGCCACAGGTGCAATCAAC
TCTCGCGACTCTATTATTCGTGTCCCTTGTATGGCTCATGTTATCCAACT
ATGCCTCAAGCAACTCTTGGGGCATATCAAGGCGGCGCCTAAGAACGATG
AAGTTAGCACCTTATGGTCAGACGCCCAATCCAGCTTTCTAAAGGATTCG
GCAGATTGTGGGGATGTTGCCCACACACTTACAAAGGTTCGTCTCTGTCT
AGAAGGAAATTGAATGACCTCATCCAGTTCTACTTCAGCGAGGCTTATGT
CCTTTCCATTTAGCTCTCTGACGCCAATTGAGGCGCCCTTAGACTCTGTT
CCTTCGTCCGATTTTCCCTCCTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013086KJC3_013086Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013086-T1KJC3_013086-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013086-T1.cdsKJC3_013086-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013086-T1.utr3p2KJC3_013086-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_013086-T1.utr3p1KJC3_013086-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013086-T1.exon3KJC3_013086-T1.exon3Aspergillus niger KJC3exon
KJC3_013086-T1.exon2KJC3_013086-T1.exon2Aspergillus niger KJC3exon
KJC3_013086-T1.exon1KJC3_013086-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013086-T1.utr5p1KJC3_013086-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR003656
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4210155..4212943 -
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