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KJC3_013089-T1, KJC3_013089-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013089-T1
Unique NameKJC3_013089-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4241979..4243252-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013089-T1 ID=KJC3_013089-T1|Name=KJC3_013089-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1274bp|location=Sequence derived from alignment at ch6:4241979..4243252- (Aspergillus niger KJC3)
ACCCACGGCTGGAGAGTCCAGACGATAGGCTGCGTCATCGCCAAGTGAGT
CAATCGGTCCGATGAGGTCTGTCGCACGACTAACCCGTCATCTAGTCTCC
CGGCGACGCCGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCG
GTCAATCAGTACTGGCTACCGCCCCAGTGGTAGGTGCTCTCTGTGACCAA
CAGGAAAATAGAAACGAAAAAGAAAGGAATCAGGAAAACAGGGCTGACAC
CTGTAGGATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCC
TGCCGTGCCGGGAGGTAATGCGCCATCACGCTATCCGACAAGGAGCCTTC
GATTCGATCGCACGGTGGGAACCAAATACTAATCCGTTTGCTGATCGCAC
CATGGCCCGCAGGTCAGCCTCCATTCTTGCCGAGTTCGCAGGGTCTGGCC
GGGAATCATGGGATAGATCTCTTGGCTCCAGTTCCAGCTCTCGGGATAGC
ATATTCACCAAGCGTGCGCTTGAATATGTCTTGGCGCGCAATCCTGCCCC
GCTGCAGGATTTCTCTGCCCATCGCGACTTTTCCGGAGAGAATATAGCTT
TTCTGACCCGGGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGG
GATAGCAGAATCTCAGACTATGGAGATCTTACCGACTTGATTCGGGAGCA
GTTTCACCGCGCGCTGTGTATTTACATGATGTTCATCAGTGATCGCGCGC
AGTTTCCAATCAACATCTCTTCGCAGCACCGGAAGGAGCTGGAAAACGTT
TTTGAGGGCCCTGCTGGGCTTCTGTTTGGAGACGCGCGCCCGGCCAATCC
TGCCGTTCCCTTTGATGCGCCAGGCTATGCTCCCACGCCCTCAGCGTCTC
CGATCGCCCCCATAAAGGCCTACTCCGGTTCGTTATTCACCGACAACAGT
CGGGTGCAATACTGGGGCCAGATTCCCCAGACATTTAATGCGACAGTCTT
TGACCGAGCCGAGGAGAGCATCAAAGACCTCGTTCTCACCAACACGTGGC
CTAAGTTTGTTCGAAGTTGCGGCATCGCAGCTGAGGCTCATTTGCTGGCG
GGAAGCTAGAGCCCTGCGTAGTTGGTTGCGGAATGAGGTCGCCAGCGATG
GAAGATTGGACTGAATGGCATCTGTCTGGGATGTCGACTGAATACTATAG
ATTAAGACTGTATGGTGGAGTAACTCATTGGACCACATTTTCTATCAGAA
CGTAGCACTGTCTTGGTACTTTAG
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Coding sequence (CDS) from alignment at ch6:4241979..4243252-

>KJC3_013089-T1 ID=KJC3_013089-T1|Name=KJC3_013089-T1|organism=Aspergillus niger KJC3|type=CDS|length=1842bp|location=Sequence derived from alignment at ch6:4241979..4243252- (Aspergillus niger KJC3)
GATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGT
GCCGGGAGGTAATGCGCCATCACGCTATCCGACAAGGAGCCTTCGATTCG
ATCGCACGGTGGGAACCAAATACTAATCCGTTTGCTGATCGCACCATGGC
CCGCAGGTCAGCCTCCATTCTTGCCGAGTTCGCAGGGTCTGGCCGGGAAT
CATGGGATAGATCTCTTGGCTCCAGTTCCAGCTCTCGGGATAGCATATTC
ACCAAGCGTGCGCTTGAATATGTCTTGGCGCGCAATCCTGCCCCGCTGCA
GGATTTCTCTGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTTCTGA
CCCGGGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGC
AGAATCTCAGACTATGGAGATCTTACCGACTTGATTCGGGAGCAGTTTCA
CCGCGCGCTGTGTATTTACATGATGTTCATCAGTGATCGCGCGCAGTTTC
CAATCAACATCTCTTCGCAGCACCGGAAGGAGCTGGAAAACGTTTTTGAG
GGCCCTGCTGGGCTTCTGTTTGGAGACGCGCGCCCGGCCAATCCTGCCGT
TCCCTTTGATGCGCCAGGCTATGCTCCCACGCCCTCAGCGTCTCCGATCG
CCCCCATAAAGGCCTACTCCGGTTCGTTATTCACCGACAACAGTCGGGTG
CAATACTGGGGCCAGATTCCCCAGACATTTAATGCGACAGTCTTTGACCG
AGCCGAGGAGAGCATCAAAGACCTCGTTCTCACCAACACGTGGCCTAAGT
TTGTTCGAAGTTGCGGCATCGCAGCTGAGGCTCATTTGCTGGCGGGAAGC
TAGATGTGGCTCATCGCCCTCTATGTTCCCGCCATGGAGCCGGTCAATCA
GTACTGGCTACCGCCCCAGTGGATTTGTCTCTCTATCTGGGTGATGGAGG
TTTTTGCTGTTCTCCTGCCGTGCCGGGAGGTAATGCGCCATCACGCTATC
CGACAAGGAGCCTTCGATTCGATCGCACGGTGGGAACCAAATACTAATCC
GTTTGCTGATCGCACCATGGCCCGCAGGTCAGCCTCCATTCTTGCCGAGT
TCGCAGGGTCTGGCCGGGAATCATGGGATAGATCTCTTGGCTCCAGTTCC
AGCTCTCGGGATAGCATATTCACCAAGCGTGCGCTTGAATATGTCTTGGC
GCGCAATCCTGCCCCGCTGCAGGATTTCTCTGCCCATCGCGACTTTTCCG
GAGAGAATATAGCTTTTCTGACCCGGGTGGCAGAATGGAAGAGCTCGCTG
CCCCATGCGGTCTGGGATAGCAGAATCTCAGACTATGGAGATCTTACCGA
CTTGATTCGGGAGCAGTTTCACCGCGCGCTGTGTATTTACATGATGTTCA
TCAGTGATCGCGCGCAGTTTCCAATCAACATCTCTTCGCAGCACCGGAAG
GAGCTGGAAAACGTTTTTGAGGGCCCTGCTGGGCTTCTGTTTGGAGACGC
GCGCCCGGCCAATCCTGCCGTTCCCTTTGATGCGCCAGGCTATGCTCCCA
CGCCCTCAGCGTCTCCGATCGCCCCCATAAAGGCCTACTCCGGTTCGTTA
TTCACCGACAACAGTCGGGTGCAATACTGGGGCCAGATTCCCCAGACATT
TAATGCGACAGTCTTTGACCGAGCCGAGGAGAGCATCAAAGACCTCGTTC
TCACCAACACGTGGCCTAAGTTTGTTCGAAGTTGCGGCATCGCAGCTGAG
GCTCATTTGCTGGCGGGAAGCTAGATGTGGCTCATCGCCCTCTATGTTCC
CGCCATGGAGCCGGTCAATCAGTACTGGCTACCGCCCCAGTG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013089KJC3_013089Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013089-T1KJC3_013089-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013089-T1.cdsKJC3_013089-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013089-T1.utr3p1KJC3_013089-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013089-T1.exon3KJC3_013089-T1.exon3Aspergillus niger KJC3exon
KJC3_013089-T1.exon2KJC3_013089-T1.exon2Aspergillus niger KJC3exon
KJC3_013089-T1.exon1KJC3_013089-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013089-T1.utr5p2KJC3_013089-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_013089-T1.utr5p1KJC3_013089-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036305
DBxrefInterPro:IPR016137
DBxrefPFAM:PF00615
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4241979..4243252 -
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