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KJC3_013094-T2, KJC3_013094-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013094-T2
Unique NameKJC3_013094-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4361932..4363542+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013094-T2 ID=KJC3_013094-T2|Name=KJC3_013094-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1611bp|location=Sequence derived from alignment at ch6:4361932..4363542+ (Aspergillus niger KJC3)
CGCCTTGCATACACTACCAAGATCCTTGTGCTTGTTACGGTGGCGTCGCT
CGTTCAGGTAAAACGGCCACCGCCTACCCCTACTGATTATCGTATCAGTG
TTTAATTGAATCATTAGGTGTTCCTCACGGTCTTGATGTGGCTCATCTCT
CGCAAATGGCACAGCACTTGGGGGATTCCAGGCACCGAGGTCCATGGAAC
CGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGGTAAGAAG
GCCTCCGACATACGCCCGGCGCATATACGACGAGAAGTGCGTGCTAACCG
ATATGCAGGTGGCCTGGCGTGTTCGGACAGTTCTTCTGGTCCTGGATTGT
GGGCCCCGTCGTTCTCCGGAAATCCCGTCACATCCACGACACCCACGGCT
GGCGAGTCCAGACAATGGGCTGCGTCATCGCCAAGTGAGTCAATCGGTCT
GATGAGGTCTGTCGTACGACTAACCCGTCCTGTAGTCTCCCGGCGACGCC
GATGTGGCTCATCGCCCTCTATGTCCCCGCCATGGAGCGAGTCAATCAGT
ACTGGCTACCGCCCCAGTGGTAGGTGCTCCGAGCCGTGACCAACAGGAAC
ATAGAAATAAAGATGGAAAGAAGCACGAAAATGTGGCTGACACCTGTAGG
ATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTG
CAGGGAGGTAATGCGCTATCACGCTATCCGACAAGGGGCCTTCGATTCGA
TCGCACGGTGGGAACCAAATACCAATCTCTTTGCCGGTAGCACCATGGCC
CGCAGGTCCGCCTCCATTCTCGTCGAGCTCACAGGGTCTGGCCGGCAATC
ATGGAGTAGATCTCTTGGCTCCAGCTCCAGCTCTCGGGACAGCATATTCA
CCAAGCGTGCGCTTGAATGTGTCTTGGCGCGCAATCCCGCCCCGCTGCAG
GATTTTTCCGCCCATCGCGACTTTTCCGGAGAGAATATAGCTTTTCTGAC
CCGAGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCA
GGATCTCAGACTATGGAGACCTTACCGACTTGATTCGGGAGCAGTTTCAC
CGCGCGCTGTGTATTTACACGACGTTCATCAGTGATCGCCATGCGCACTT
TCCGATCAACATCTCTTCGCAGGACCGGAAGGAGCTGGAGAAGGTCTTCG
CGGGCCCTGCTGGGCTTCTCTTCGGGGACGGGCGCCCGGCCAATCCCGCC
GTTCCCTTCGATGCGCCAGGGTATCCCCCCACACCCTTAGCGTCTCCGAT
CGCCTCCATGAAGGCCGAAGCTGGTTCTCTAGTCGCCGACAACCGCCCGG
TGCAATCCTGGGGCGAGATTCCCCAGACATTCAGTGCGACAGTCTTTGAC
CGAGCCGAGGAGAGCATCAAGTACCTCGTCCTGACCAACACGTGGCCTAA
GTTTGTTCGAAGTTGCGGCATCGCAGCTGAGGTTGATTTGCTGGCAGGGA
GCTAGGGTCCCGCGTAGCTGGTTCCGGAACGAGGTCGCCAGCGATGGAAG
ATTGGACTGCATGGCATCTGTCCGGGATGTCGACAAACTTCTATAGATTA
ATATGGCGGAG
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Coding sequence (CDS) from alignment at ch6:4361932..4363542+

>KJC3_013094-T2 ID=KJC3_013094-T2|Name=KJC3_013094-T2|organism=Aspergillus niger KJC3|type=CDS|length=963bp|location=Sequence derived from alignment at ch6:4361932..4363542+ (Aspergillus niger KJC3)
ATGTGGCTCATCTCTCGCAAATGGCACAGCACTTGGGGGATTCCAGGCAC
CGAGGTCCATGGAACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCT
GGGAGTGGTGGCCTGGCGTGTTCGGACAGTTCTTCTGGTCCTGGATTGTG
GGCCCCGTCGTTCTCCGGAAATCCCGTCACATCCACGACACCCACGGCTG
GCGAGTCCAGACAATGGGCTGCGTCATCGCCAATCTCCCGGCGACGCCGA
TGTGGCTCATCGCCCTCTATGTCCCCGCCATGGAGCGAGTCAATCAGTAC
TGGCTACCGCCCCAGTGGTAGATGTGGCTCATCTCTCGCAAATGGCACAG
CACTTGGGGGATTCCAGGCACCGAGGTCCATGGAACCGAGATGCAGCAAA
AGTCGGAAATGGGCCGGGGCTGGGAGTGGTGGCCTGGCGTGTTCGGACAG
TTCTTCTGGTCCTGGATTGTGGGCCCCGTCGTTCTCCGGAAATCCCGTCA
CATCCACGACACCCACGGCTGGCGAGTCCAGACAATGGGCTGCGTCATCG
CCAATCTCCCGGCGACGCCGATGTGGCTCATCGCCCTCTATGTCCCCGCC
ATGGAGCGAGTCAATCAGTACTGGCTACCGCCCCAGTGGTAGATGTGGCT
CATCTCTCGCAAATGGCACAGCACTTGGGGGATTCCAGGCACCGAGGTCC
ATGGAACCGAGATGCAGCAAAAGTCGGAAATGGGCCGGGGCTGGGAGTGG
TGGCCTGGCGTGTTCGGACAGTTCTTCTGGTCCTGGATTGTGGGCCCCGT
CGTTCTCCGGAAATCCCGTCACATCCACGACACCCACGGCTGGCGAGTCC
AGACAATGGGCTGCGTCATCGCCAATCTCCCGGCGACGCCGATGTGGCTC
ATCGCCCTCTATGTCCCCGCCATGGAGCGAGTCAATCAGTACTGGCTACC
GCCCCAGTGGTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013094KJC3_013094Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013094-T2KJC3_013094-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013094-T2.utr5p1KJC3_013094-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013094-T2.exon1KJC3_013094-T2.exon1Aspergillus niger KJC3exon
KJC3_013094-T2.exon2KJC3_013094-T2.exon2Aspergillus niger KJC3exon
KJC3_013094-T2.exon3KJC3_013094-T2.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013094-T2.cdsKJC3_013094-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013094-T2.utr3p1KJC3_013094-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036305
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4361932..4363542 +
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