You are here

Home

KJC3_013097-T1, KJC3_013097-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013097-T1
Unique NameKJC3_013097-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4372416..4375469+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013097-T1 ID=KJC3_013097-T1|Name=KJC3_013097-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3054bp|location=Sequence derived from alignment at ch6:4372416..4375469+ (Aspergillus niger KJC3)
GCCCCCTAGAACAGCGCCGATTAGGGCCATCTGCATTCCTAGCCTAATAA
GATTTGCCCGCTAGATAAGTCCTGATTGCACATTATAATCGTAGGTCGAG
GGCCCGGTCAACGATATGCGTTTATCGACCCATGGCGGTAGACGCATTCT
CTCGCCCGTCCCTGCCCAGTTTGCCCGCACCGTTCTCTACCCGCCACCAT
CCCTCAACTTCTTTCAAAAGACCTCACCACGGATGCATTCGCAGAACGAT
TGGGAAGAATGTAATTGACCATCACATCAAATCAATACGATTTAAGTTTT
CATTCTGGCATTACCTGGGCTCTTTTTTGACGGTCACCATGTCTCAACCG
GAACAACAATGTGCGGCCCGTGGACTTGTTTTTGGGCCCTGGTCTGCTGG
TTCCCTCATGGCTCAACTATAACGAGGGGAGATAAGCTATTCAGTGTTAG
CGTGCGCTCAATGCGATGTTGTCCTCGATATATCAATAGCCAGGTCGCCA
TGATTCCCAGGATCGTCATCAAGCATGCGGCCAACACACCAAGCTCGCAT
CGAATCCGAGGAGAAGGCGCTGGAAGCCTACCGCCAGGAGCGCTACCAGG
GTAGCGCCCGAGTCCGCCTGGACTGTCTGACGTTCGAAAATGGCTTTGGC
CGCTTGATGGACGACGGCCGAAATGCCCTCCGACTGGAGCAAATCCTCGA
GATACAAGGATGTCTCCGCATCAATCGAGACTACCATGTGCCCGTCTTGG
TCCGAGCCACGGACTGGGGCTCCCACATCAGGCTGTTGCCGGGCGAGGCG
GAGCCGTTTCCCGAGCTGATCGTGCCCTTGAACATGTCGCTGCGCGCATT
GGGCCACGAGAACGTCATTGCCGCAGCGCGAAAAAAGCTCTACGGCGAGA
ACCGATGGTGGGTGGTCGATGTGTATGTGGAGGATCCCAGTAAGTTGGCG
CTGGAGTCTTTCCGAGTCTCAGCCTGTGTGCCCCTTCCGGTCCACCTGCT
AAGTGTGGCTCGTCAGATGAGCAACCCCACCGACAGTCTCTCCATTCTCA
ACTCGTTCGCTCGCTTCGAGAGCATTTCCCAAACCAACGCCGACCGCCGG
ACGGATTGATCTACGAAAGAATTCGGTTCTATCAAGGATATCTGGGCCAT
CCGCCGGACGAACAAGCGGAGGCACTTTGGTGGGCCGTCCTCCGACACGA
CCCCAAGAGTAAGAAGCATATATATCTCCGGGCCTTTCTCCAACATCCCA
GTTTCCCTGCAGCATTTGATGCCCTGCTCCTTATTCCGGGGCTTTGGGCC
AAAATGCAATTGGGCGTGCTGCATACCATGGTGTCACTGCGATGTGACGA
GGTGAGTGAGTGGCCCAAGTGTCTACGAAATGAAAGTCTCTTCTAAGGAA
CCCGTTATCTCTAGCCCATCCTGTCCTACCTCGAAACTATCCGCACGGTC
TGGATGGACCGTATTTTCGGCGGGAGCGACACCCTTCCTGTTCACGCAGA
CGCGGAGACCGTTCTCGCGCTGGAATCTCAAGTCCCAAAGCTCTCGGAAC
CGGACCGGGAAAATCTGCGATCTCGGATGATGGGCGGCCGGACGTTGTTT
CCATCGATCGACGACTCCGACACACGGGCGGCACTGTGGGAGCGACTGAA
GCAGATCGATACCCCTTTTCCCACCCTGGGGACGTTCTTCCAGGACCTCC
GTTTCTTAGGTGTTGCCAGCAAGGTGATGAAGGCTCTTCTTTTTCCACCA
GAGGACCTGGGCTCGAAGAAGACCAAGAAGATCACTATCGACTGTGAACT
CGGTACGCAGCATCGGACCGATGCCAGCGTGTCATTAAGAGAGACAAGAC
TGCAAGTACGGCGGGGATTGCACGAGCTCTGGCGCTTCAGCTTCCAATAC
GGGCTGGACATGACCGAAGTTGCACGTCGTCAGCCGCATAAGAGGAAGAA
AGCGTGTAGCTCCTATCCTGTCCCGAATTGCTCGACATCGGTTGACCGAA
TGGCGTTGTGGCGCCACTTCTTCTGGCTGGCTGACCAGCAAGGCTTTCAG
ATCCCGGCTATAGCCGAGTTTGCGCCGGGACAAGCGTCCCTGCCCAACCC
GCAAACTCCGGAGGGCCTTGGCAGCACCGAACAGGATGAAGCAGTGAATC
GGCGTTGCGGTATCCCATACGCTGATACGGTCGATGCGGATCGCTTCGCC
CTAGAAGGGAATAGACTGTGGCAGCCCTGGGAGGCCCCACAGGTTACAAC
CGTGTTCTTCCGACAGTCACAGTTTCAGACCTTCTTCCGCTACCTTTGGG
ATGGAACTGGAATCAATCAGGCCACGAACGCCGCCCGCGAATCTGCAGCG
ACCGATGGAACCGCAGCGGTAGATCAAGAGATGTTGAATGACGAGTTGGA
GCATCGCATGCCATCGCCAAGTTTCTCTCAGATTCTACAAATAAGCAGTC
CGATCGACTGGTCTATGGCAATGTGGGACTGCGGAATGGGATCACTTGAA
ATGCCTATAGGCAATCTGGAGGTGGTTGTGACCATCCCGAATCACAACCC
AAGACCAATTTCGCTGCCATGTGACGAAATGATCATCAACAACTTCTTCA
ATGGACTGAAAGAGCGTAGATTTGTTATCCACAGCCTGGATTACCACACG
GTGTCCGCAGAGCCAAGTCTTTATCTCTGGCATCTGAGGTACCCATGGGA
AAGAGTTCAGGCCATATTGACCGAGGAGAATGTGCAGGAGTATACGGCAT
CCGACGGAAATCGACTTAAAAGGAGACGAAGAGAGATCGCTGAGGCAATA
GATGACATTGCTGCGTGGGTGGACGAGCAAATTCTTAAGCTATCTGTTCC
CGCTCCCCCCTCTTGGGAATGGAATGTACATGAGGAGGAGTATTGATCAG
AATAGAAAAGATTTGATATTTTCGATTTACAGAGATCATATCATCGTGAC
AAGATAAACATGCTGGATCTTCTGTTGTATGGTATCATTACAGCACGAAG
CAAATGGCTCATTGGTAAAATAGTATTCTACCCTATTGCGGGATTATGCT
CGGA
back to top

Coding sequence (CDS) from alignment at ch6:4372416..4375469+

>KJC3_013097-T1 ID=KJC3_013097-T1|Name=KJC3_013097-T1|organism=Aspergillus niger KJC3|type=CDS|length=1443bp|location=Sequence derived from alignment at ch6:4372416..4375469+ (Aspergillus niger KJC3)
ATGGACCGTATTTTCGGCGGGAGCGACACCCTTCCTGTTCACGCAGACGC
GGAGACCGTTCTCGCGCTGGAATCTCAAGTCCCAAAGCTCTCGGAACCGG
ACCGGGAAAATCTGCGATCTCGGATGATGGGCGGCCGGACGTTGTTTCCA
TCGATCGACGACTCCGACACACGGGCGGCACTGTGGGAGCGACTGAAGCA
GATCGATACCCCTTTTCCCACCCTGGGGACGTTCTTCCAGGACCTCCGTT
TCTTAGGTGTTGCCAGCAAGGTGATGAAGGCTCTTCTTTTTCCACCAGAG
GACCTGGGCTCGAAGAAGACCAAGAAGATCACTATCGACTGTGAACTCGG
TACGCAGCATCGGACCGATGCCAGCGTGTCATTAAGAGAGACAAGACTGC
AAGTACGGCGGGGATTGCACGAGCTCTGGCGCTTCAGCTTCCAATACGGG
CTGGACATGACCGAAGTTGCACGTCGTCAGCCGCATAAGAGGAAGAAAGC
GTGTAGCTCCTATCCTGTCCCGAATTGCTCGACATCGGTTGACCGAATGG
CGTTGTGGCGCCACTTCTTCTGGCTGGCTGACCAGCAAGGCTTTCAGATC
CCGGCTATAGCCGAGTTTGCGCCGGGACAAGCGTCCCTGCCCAACCCGCA
AACTCCGGAGGGCCTTGGCAGCACCGAACAGGATGAAGCAGTGAATCGGC
GTTGCGGTATCCCATACGCTGATACGGTCGATGCGGATCGCTTCGCCCTA
GAAGGGAATAGACTGTGGCAGCCCTGGGAGGCCCCACAGGTTACAACCGT
GTTCTTCCGACAGTCACAGTTTCAGACCTTCTTCCGCTACCTTTGGGATG
GAACTGGAATCAATCAGGCCACGAACGCCGCCCGCGAATCTGCAGCGACC
GATGGAACCGCAGCGGTAGATCAAGAGATGTTGAATGACGAGTTGGAGCA
TCGCATGCCATCGCCAAGTTTCTCTCAGATTCTACAAATAAGCAGTCCGA
TCGACTGGTCTATGGCAATGTGGGACTGCGGAATGGGATCACTTGAAATG
CCTATAGGCAATCTGGAGGTGGTTGTGACCATCCCGAATCACAACCCAAG
ACCAATTTCGCTGCCATGTGACGAAATGATCATCAACAACTTCTTCAATG
GACTGAAAGAGCGTAGATTTGTTATCCACAGCCTGGATTACCACACGGTG
TCCGCAGAGCCAAGTCTTTATCTCTGGCATCTGAGGTACCCATGGGAAAG
AGTTCAGGCCATATTGACCGAGGAGAATGTGCAGGAGTATACGGCATCCG
ACGGAAATCGACTTAAAAGGAGACGAAGAGAGATCGCTGAGGCAATAGAT
GACATTGCTGCGTGGGTGGACGAGCAAATTCTTAAGCTATCTGTTCCCGC
TCCCCCCTCTTGGGAATGGAATGTACATGAGGAGGAGTATTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013097KJC3_013097Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013097-T1.utr5p1KJC3_013097-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013097-T1.exon1KJC3_013097-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013097-T1.cdsKJC3_013097-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013097-T1.utr3p1KJC3_013097-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013097-T1KJC3_013097-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR022198
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4372416..4375469 +
Powered by Drupal