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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4480390..4482889- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013098-T1 ID=KJC3_013098-T1|Name=KJC3_013098-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2500bp|location=Sequence derived from alignment at ch6:4480390..4482889- (Aspergillus niger KJC3)
ATACACTACCAAGATCCTCGTGTTTGTTACGGTGGCGTCGCTCGTTCAGG
TAAAACGGCCACCGCCTACTCCTATTGACAATCGTTCGGTGTCTAATTGA
GTCATTAGGTATTTCTCACGGTCTTGATGTGGCTCATCTCTCGCAAATGG
CATCGTACTTGGGGGAATCCAGGCACCGAGGTCCATGGAACCGAGATGCA
GCAAAAGTCGGCAATGGAGCGGGGCTGGGAGTGGTAAGAAAGCCTCCCGA
CATACGCCTAGCGCATGTACGGCGAGAGCTGCGCGCTAACCGATATGCAG
GTAGCCTGGCGTGTTTGGACAGGTGTTCTGGTCGTGGATTGTGGGCCCCG
TCGTTCTCTGGAAATCCCGGCACATCCACGACACCCACGGCTGGAGAGTC
CAGACGATAGGCTGCGTCATCGCCAAGTGAGTCAATCGATCTGATGAGGT
CTGTCGCACGACTGATCCATCATCTAGTCTCCCGGCGACGCCGATGTGGC
TCATCGCCCTCCATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTA
CCCCCCCAGTGGTAGGTGCTCTCTGTGACCAACAGGAAAATAGAAACGAA
GAAGAAAAGAAGCAGGAAAGCGGGGCTGACCCTTGTAGGATTTGTCTCTC
TATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGAGAGGTAA
TGCGCCATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACGGTGG
GAACCCAATACCAATCCTTTTGCTGATGGCACCACGGCCCGCAGGTCAGC
CTCCATTCTTGTCGAGCTCACAGGGTCTGGCCGGGAATCATGGGATAGAT
CTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCG
CTTGAATGCGTCTTGGCGCTCAATCCTGCCCCGCTGCAGGATTCCTCCGC
CCATCGCGACTTTTCTGGAGAGAATATAGCTTTTCTGACCCGGGTGGCAG
AATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGAATCTCAGAC
TATGGAGATCTTACCGATTTGATTCGGGAGCAGTTTTACCGCGCGCTGTG
TATTTACACGACGTTCATCAGTGGTCGCGCGCAGTTTCCAATCAACATCT
CTTCGCAGCACCAGAAGGAGCTGGAGAACGTTTTTGAGGGCCCTGCTGGG
CTTCTGTTTGGACACGCGCGCCCGGCCAATCCTGCCGTTCCCTTTGATGC
GCCAGGCTATGGCCCCACGCCCTCAGCGTCTCCGATCGCCTCCATAAAGG
CCGACTCCGGTTTGCTATTCACCGACAATAGTCGGGCGCAATACTGGGGC
GAAATCCCCCAAACATTCAATGCGACGGTCTTTGACCGAGCCGAGGAGAG
CATCAAAGACCTCGTCCTCACCAACACATGGCCCAAGTTTGTTCGAGGTT
GCGGCCTCGCAGCTGAGGTTGGTTTGCTCGCGGAAAGCTAGAGTCCCTGC
GTAGCTGGTTTCGGAACGAGGTCGCCAGCGATGGAAGGTTGGACTGCATG
GCATCTGTTTGGGATGTTGACAAAATACTATAGATATATATGGTGGAGTC
ACTCATTGGATCATATAGTCTGTCGGAACGTCGCACTGTCTTGTTACTAT
AGAATAGTCGAGCAATAGGTGAAGACCATCTGGTCAGAAGAGCCAATGAC
GCCGAAATTATTGACTCAGCCACCGCTTACGAGTCTACTGTTCCCCGCTC
AACACCACGTTCTACGGGTATTGCAGCAGCGCTTGGAGCGCTCTGCGTTC
GAGTCTATCCAGAAATGCCACCCCCAGCTCGGCCAGTCAAACGGATAGGA
TTGTGCCGAGAAGGTGGAACTGCACATGGCGTTTAGAGCGCTCCAGCGAA
GAAGCCGTATCCATTCCGCATCTAAGGCTTCGATCATCCCAAAGGGGCTG
AATCGGTTGCGAGCTGACATTGAGGGCATCCGTCACGCGGCTGTGCACCG
CCAGCTACAGGATCATCGTCGTCTACTACAGCAACTGCACTCAGCCCGAG
TGTTTGCAATTGTATGGCTGGGCGACTCGCAGTGTGGAATGGAGATCGAG
CAGTGTCAAATGCGGATCAACCGGCTTTTCAGCGGATGGAAGGCACACAC
CCGCCGTCTCCATGGCAATCTGGCTGCGCGGATGGGATGTAACAGGATGC
CTGAAGGCCGACATCACCAATTTCTCTTGCTTGAGGCGACAAGGAGACTC
TTGGAAAAGACCAATCACGATTGTGTTGGGCAAGAGGACTACATCCTACG
AGCGAGCTTTCCGTCATTGTATATGACGATGAGGGCAGGGCATGCGTAGC
ATGGCATATGACATGTTCTTGAATACAAAGAGGCCAGGAGCGAGAATACA
TGATATAAATTTAGCATATGTTATCGCTCCTATGCCAACACGAATTAAAC
ACGCAAGGCCGAAGATGACTCTGTTCGTTGCAGTATTGGGCCTCCAATTG
back to topCoding sequence (CDS) from alignment at ch6:4480390..4482889- >KJC3_013098-T1 ID=KJC3_013098-T1|Name=KJC3_013098-T1|organism=Aspergillus niger KJC3|type=CDS|length=3681bp|location=Sequence derived from alignment at ch6:4480390..4482889- (Aspergillus niger KJC3)
TCTCCCGGCGACGCCGATGTGGCTCATCGCCCTCCATGTTCCCGCCATGG
AGCCGGTCAATCAGTACTGGCTACCCCCCCAGTGGTAGGTGCTCTCTGTG
ACCAACAGGAAAATAGAAACGAAGAAGAAAAGAAGCAGGAAAGCGGGGCT
GACCCTTGTAGGATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGT
TCTCCTGCCGTGCCGAGAGGTAATGCGCCATCACGCTATCCGACAAGGGG
CCTTCGATTCGATCGCACGGTGGGAACCCAATACCAATCCTTTTGCTGAT
GGCACCACGGCCCGCAGGTCAGCCTCCATTCTTGTCGAGCTCACAGGGTC
TGGCCGGGAATCATGGGATAGATCTCTTGGCTCCAGCTCCAGCTCTCGGG
ATAGCATATTCACCAAGCGTGCGCTTGAATGCGTCTTGGCGCTCAATCCT
GCCCCGCTGCAGGATTCCTCCGCCCATCGCGACTTTTCTGGAGAGAATAT
AGCTTTTCTGACCCGGGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGG
TCTGGGATAGCAGAATCTCAGACTATGGAGATCTTACCGATTTGATTCGG
GAGCAGTTTTACCGCGCGCTGTGTATTTACACGACGTTCATCAGTGGTCG
CGCGCAGTTTCCAATCAACATCTCTTCGCAGCACCAGAAGGAGCTGGAGA
ACGTTTTTGAGGGCCCTGCTGGGCTTCTGTTTGGACACGCGCGCCCGGCC
AATCCTGCCGTTCCCTTTGATGCGCCAGGCTATGGCCCCACGCCCTCAGC
GTCTCCGATCGCCTCCATAAAGGCCGACTCCGGTTTGCTATTCACCGACA
ATAGTCGGGCGCAATACTGGGGCGAAATCCCCCAAACATTCAATGCGACG
GTCTTTGACCGAGCCGAGGAGAGCATCAAAGACCTCGTCCTCACCAACAC
ATGGCCCAAGTTTGTTCGAGGTTGCGGCCTCGCAGCTGAGGTTGGTTTGC
TCGCGGAAAGCTAGGTAGCCTGGCGTGTTTGGACAGGTGTTCTGGTCGTG
GATTGTGGGCCCCGTCGTTCTCTGGAAATCCCGGCACATCCACGACACCC
ACGGCTGGAGAGTCCAGACGATAGGCTGCGTCATCGCCAAATGGCATCGT
ACTTGGGGGAATCCAGGCACCGAGGTCCATGGAACCGAGATGCAGCAAAA
GTCGGCAATGGAGCGGGGCTGGGAGTGTCTCCCGGCGACGCCGATGTGGC
TCATCGCCCTCCATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTA
CCCCCCCAGTGGTAGGTGCTCTCTGTGACCAACAGGAAAATAGAAACGAA
GAAGAAAAGAAGCAGGAAAGCGGGGCTGACCCTTGTAGGATTTGTCTCTC
TATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGAGAGGTAA
TGCGCCATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACGGTGG
GAACCCAATACCAATCCTTTTGCTGATGGCACCACGGCCCGCAGGTCAGC
CTCCATTCTTGTCGAGCTCACAGGGTCTGGCCGGGAATCATGGGATAGAT
CTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCG
CTTGAATGCGTCTTGGCGCTCAATCCTGCCCCGCTGCAGGATTCCTCCGC
CCATCGCGACTTTTCTGGAGAGAATATAGCTTTTCTGACCCGGGTGGCAG
AATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGAATCTCAGAC
TATGGAGATCTTACCGATTTGATTCGGGAGCAGTTTTACCGCGCGCTGTG
TATTTACACGACGTTCATCAGTGGTCGCGCGCAGTTTCCAATCAACATCT
CTTCGCAGCACCAGAAGGAGCTGGAGAACGTTTTTGAGGGCCCTGCTGGG
CTTCTGTTTGGACACGCGCGCCCGGCCAATCCTGCCGTTCCCTTTGATGC
GCCAGGCTATGGCCCCACGCCCTCAGCGTCTCCGATCGCCTCCATAAAGG
CCGACTCCGGTTTGCTATTCACCGACAATAGTCGGGCGCAATACTGGGGC
GAAATCCCCCAAACATTCAATGCGACGGTCTTTGACCGAGCCGAGGAGAG
CATCAAAGACCTCGTCCTCACCAACACATGGCCCAAGTTTGTTCGAGGTT
GCGGCCTCGCAGCTGAGGTTGGTTTGCTCGCGGAAAGCTAGGTAGCCTGG
CGTGTTTGGACAGGTGTTCTGGTCGTGGATTGTGGGCCCCGTCGTTCTCT
GGAAATCCCGGCACATCCACGACACCCACGGCTGGAGAGTCCAGACGATA
GGCTGCGTCATCGCCAAATGGCATCGTACTTGGGGGAATCCAGGCACCGA
GGTCCATGGAACCGAGATGCAGCAAAAGTCGGCAATGGAGCGGGGCTGGG
AGTGTCTCCCGGCGACGCCGATGTGGCTCATCGCCCTCCATGTTCCCGCC
ATGGAGCCGGTCAATCAGTACTGGCTACCCCCCCAGTGGTAGGTGCTCTC
TGTGACCAACAGGAAAATAGAAACGAAGAAGAAAAGAAGCAGGAAAGCGG
GGCTGACCCTTGTAGGATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTG
CTGTTCTCCTGCCGTGCCGAGAGGTAATGCGCCATCACGCTATCCGACAA
GGGGCCTTCGATTCGATCGCACGGTGGGAACCCAATACCAATCCTTTTGC
TGATGGCACCACGGCCCGCAGGTCAGCCTCCATTCTTGTCGAGCTCACAG
GGTCTGGCCGGGAATCATGGGATAGATCTCTTGGCTCCAGCTCCAGCTCT
CGGGATAGCATATTCACCAAGCGTGCGCTTGAATGCGTCTTGGCGCTCAA
TCCTGCCCCGCTGCAGGATTCCTCCGCCCATCGCGACTTTTCTGGAGAGA
ATATAGCTTTTCTGACCCGGGTGGCAGAATGGAAGAGCTCGCTGCCCCAT
GCGGTCTGGGATAGCAGAATCTCAGACTATGGAGATCTTACCGATTTGAT
TCGGGAGCAGTTTTACCGCGCGCTGTGTATTTACACGACGTTCATCAGTG
GTCGCGCGCAGTTTCCAATCAACATCTCTTCGCAGCACCAGAAGGAGCTG
GAGAACGTTTTTGAGGGCCCTGCTGGGCTTCTGTTTGGACACGCGCGCCC
GGCCAATCCTGCCGTTCCCTTTGATGCGCCAGGCTATGGCCCCACGCCCT
CAGCGTCTCCGATCGCCTCCATAAAGGCCGACTCCGGTTTGCTATTCACC
GACAATAGTCGGGCGCAATACTGGGGCGAAATCCCCCAAACATTCAATGC
GACGGTCTTTGACCGAGCCGAGGAGAGCATCAAAGACCTCGTCCTCACCA
ACACATGGCCCAAGTTTGTTCGAGGTTGCGGCCTCGCAGCTGAGGTTGGT
TTGCTCGCGGAAAGCTAGGTAGCCTGGCGTGTTTGGACAGGTGTTCTGGT
CGTGGATTGTGGGCCCCGTCGTTCTCTGGAAATCCCGGCACATCCACGAC
ACCCACGGCTGGAGAGTCCAGACGATAGGCTGCGTCATCGCCAAATGGCA
TCGTACTTGGGGGAATCCAGGCACCGAGGTCCATGGAACCGAGATGCAGC
AAAAGTCGGCAATGGAGCGGGGCTGGGAGTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013098-T1.utr3p1 | KJC3_013098-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036305 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4480390..4482889 - |
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