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KJC3_013098-T2, KJC3_013098-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013098-T2
Unique NameKJC3_013098-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:4480390..4482889-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013098-T2 ID=KJC3_013098-T2|Name=KJC3_013098-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2500bp|location=Sequence derived from alignment at ch6:4480390..4482889- (Aspergillus niger KJC3)
ATACACTACCAAGATCCTCGTGTTTGTTACGGTGGCGTCGCTCGTTCAGG
TAAAACGGCCACCGCCTACTCCTATTGACAATCGTTCGGTGTCTAATTGA
GTCATTAGGTATTTCTCACGGTCTTGATGTGGCTCATCTCTCGCAAATGG
CATCGTACTTGGGGGAATCCAGGCACCGAGGTCCATGGAACCGAGATGCA
GCAAAAGTCGGCAATGGAGCGGGGCTGGGAGTGGTAAGAAAGCCTCCCGA
CATACGCCTAGCGCATGTACGGCGAGAGCTGCGCGCTAACCGATATGCAG
GTAGCCTGGCGTGTTTGGACAGGTGTTCTGGTCGTGGATTGTGGGCCCCG
TCGTTCTCTGGAAATCCCGGCACATCCACGACACCCACGGCTGGAGAGTC
CAGACGATAGGCTGCGTCATCGCCAAGTGAGTCAATCGATCTGATGAGGT
CTGTCGCACGACTGATCCATCATCTAGTCTCCCGGCGACGCCGATGTGGC
TCATCGCCCTCCATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTA
CCCCCCCAGTGGTAGGTGCTCTCTGTGACCAACAGGAAAATAGAAACGAA
GAAGAAAAGAAGCAGGAAAGCGGGGCTGACCCTTGTAGGATTTGTCTCTC
TATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGAGAGGTAA
TGCGCCATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACGGTGG
GAACCCAATACCAATCCTTTTGCTGATGGCACCACGGCCCGCAGGTCAGC
CTCCATTCTTGTCGAGCTCACAGGGTCTGGCCGGGAATCATGGGATAGAT
CTCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCG
CTTGAATGCGTCTTGGCGCTCAATCCTGCCCCGCTGCAGGATTCCTCCGC
CCATCGCGACTTTTCTGGAGAGAATATAGCTTTTCTGACCCGGGTGGCAG
AATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGAATCTCAGAC
TATGGAGATCTTACCGATTTGATTCGGGAGCAGTTTTACCGCGCGCTGTG
TATTTACACGACGTTCATCAGTGGTCGCGCGCAGTTTCCAATCAACATCT
CTTCGCAGCACCAGAAGGAGCTGGAGAACGTTTTTGAGGGCCCTGCTGGG
CTTCTGTTTGGACACGCGCGCCCGGCCAATCCTGCCGTTCCCTTTGATGC
GCCAGGCTATGGCCCCACGCCCTCAGCGTCTCCGATCGCCTCCATAAAGG
CCGACTCCGGTTTGCTATTCACCGACAATAGTCGGGCGCAATACTGGGGC
GAAATCCCCCAAACATTCAATGCGACGGTCTTTGACCGAGCCGAGGAGAG
CATCAAAGACCTCGTCCTCACCAACACATGGCCCAAGTTTGTTCGAGGTT
GCGGCCTCGCAGCTGAGGTTGGTTTGCTCGCGGAAAGCTAGAGTCCCTGC
GTAGCTGGTTTCGGAACGAGGTCGCCAGCGATGGAAGGTTGGACTGCATG
GCATCTGTTTGGGATGTTGACAAAATACTATAGATATATATGGTGGAGTC
ACTCATTGGATCATATAGTCTGTCGGAACGTCGCACTGTCTTGTTACTAT
AGAATAGTCGAGCAATAGGTGAAGACCATCTGGTCAGAAGAGCCAATGAC
GCCGAAATTATTGACTCAGCCACCGCTTACGAGTCTACTGTTCCCCGCTC
AACACCACGTTCTACGGGTATTGCAGCAGCGCTTGGAGCGCTCTGCGTTC
GAGTCTATCCAGAAATGCCACCCCCAGCTCGGCCAGTCAAACGGATAGGA
TTGTGCCGAGAAGGTGGAACTGCACATGGCGTTTAGAGCGCTCCAGCGAA
GAAGCCGTATCCATTCCGCATCTAAGGCTTCGATCATCCCAAAGGGGCTG
AATCGGTTGCGAGCTGACATTGAGGGCATCCGTCACGCGGCTGTGCACCG
CCAGCTACAGGATCATCGTCGTCTACTACAGCAACTGCACTCAGCCCGAG
TGTTTGCAATTGTATGGCTGGGCGACTCGCAGTGTGGAATGGAGATCGAG
CAGTGTCAAATGCGGATCAACCGGCTTTTCAGCGGATGGAAGGCACACAC
CCGCCGTCTCCATGGCAATCTGGCTGCGCGGATGGGATGTAACAGGATGC
CTGAAGGCCGACATCACCAATTTCTCTTGCTTGAGGCGACAAGGAGACTC
TTGGAAAAGACCAATCACGATTGTGTTGGGCAAGAGGACTACATCCTACG
AGCGAGCTTTCCGTCATTGTATATGACGATGAGGGCAGGGCATGCGTAGC
ATGGCATATGACATGTTCTTGAATACAAAGAGGCCAGGAGCGAGAATACA
TGATATAAATTTAGCATATGTTATCGCTCCTATGCCAACACGAATTAAAC
ACGCAAGGCCGAAGATGACTCTGTTCGTTGCAGTATTGGGCCTCCAATTG
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Coding sequence (CDS) from alignment at ch6:4480390..4482889-

>KJC3_013098-T2 ID=KJC3_013098-T2|Name=KJC3_013098-T2|organism=Aspergillus niger KJC3|type=CDS|length=2352bp|location=Sequence derived from alignment at ch6:4480390..4482889- (Aspergillus niger KJC3)
TCTCCCGGCGACGCCGATGTGGCTCATCGCCCTCCATGTTCCCGCCATGG
AGCCGGTCAATCAGTACTGGCTACCCCCCCAGTGGTAGGTGCTCTCTGTG
ACCAACAGGAAAATAGAAACGAAGAAGAAAAGAAGCAGGAAAGCGGGGCT
GACCCTTGTAGGATTTGTCTCTCTATCTGGGTGATGGAGGTTTTTGCTGT
TCTCCTGCCGTGCCGAGAGGTAATGCGCCATCACGCTATCCGACAAGGGG
CCTTCGATTCGATCGCACGGTGGGAACCCAATACCAATCCTTTTGCTGAT
GGCACCACGGCCCGCAGGTCAGCCTCCATTCTTGTCGAGCTCACAGGGTC
TGGCCGGGAATCATGGGATAGATCTCTTGGCTCCAGCTCCAGCTCTCGGG
ATAGCATATTCACCAAGCGTGCGCTTGAATGCGTCTTGGCGCTCAATCCT
GCCCCGCTGCAGGATTCCTCCGCCCATCGCGACTTTTCTGGAGAGAATAT
AGCTTTTCTGACCCGGGTGGCAGAATGGAAGAGCTCGCTGCCCCATGCGG
TCTGGGATAGCAGAATCTCAGACTATGGAGATCTTACCGATTTGATTCGG
GAGCAGTTTTACCGCGCGCTGTGTATTTACACGACGTTCATCAGTGGTCG
CGCGCAGTTTCCAATCAACATCTCTTCGCAGCACCAGAAGGAGCTGGAGA
ACGTTTTTGAGGGCCCTGCTGGGCTTCTGTTTGGACACGCGCGCCCGGCC
AATCCTGCCGTTCCCTTTGATGCGCCAGGCTATGGCCCCACGCCCTCAGC
GTCTCCGATCGCCTCCATAAAGGCCGACTCCGGTTTGCTATTCACCGACA
ATAGTCGGGCGCAATACTGGGGCGAAATCCCCCAAACATTCAATGCGACG
GTCTTTGACCGAGCCGAGGAGAGCATCAAAGACCTCGTCCTCACCAACAC
ATGGCCCAAGTTTGTTCGAGGTTGCGGCCTCGCAGCTGAGGTTGGTTTGC
TCGCGGAAAGCTAGATGTACGGCGAGAGCTGCGCGCTAACCGATATGCAG
GTAGCCTGGCGTGTTTGGACAGGTGTTCTGGTCGTGGATTGTGGGCCCCG
TCGTTCTCTGGAAATCCCGGCACATCCACGACACCCACGGCTGGAGAGTC
CAGACGATAGGCTGCGTCATCGCCAATCTCCCGGCGACGCCGATGTGGCT
CATCGCCCTCCATGTTCCCGCCATGGAGCCGGTCAATCAGTACTGGCTAC
CCCCCCAGTGGTAGGTGCTCTCTGTGACCAACAGGAAAATAGAAACGAAG
AAGAAAAGAAGCAGGAAAGCGGGGCTGACCCTTGTAGGATTTGTCTCTCT
ATCTGGGTGATGGAGGTTTTTGCTGTTCTCCTGCCGTGCCGAGAGGTAAT
GCGCCATCACGCTATCCGACAAGGGGCCTTCGATTCGATCGCACGGTGGG
AACCCAATACCAATCCTTTTGCTGATGGCACCACGGCCCGCAGGTCAGCC
TCCATTCTTGTCGAGCTCACAGGGTCTGGCCGGGAATCATGGGATAGATC
TCTTGGCTCCAGCTCCAGCTCTCGGGATAGCATATTCACCAAGCGTGCGC
TTGAATGCGTCTTGGCGCTCAATCCTGCCCCGCTGCAGGATTCCTCCGCC
CATCGCGACTTTTCTGGAGAGAATATAGCTTTTCTGACCCGGGTGGCAGA
ATGGAAGAGCTCGCTGCCCCATGCGGTCTGGGATAGCAGAATCTCAGACT
ATGGAGATCTTACCGATTTGATTCGGGAGCAGTTTTACCGCGCGCTGTGT
ATTTACACGACGTTCATCAGTGGTCGCGCGCAGTTTCCAATCAACATCTC
TTCGCAGCACCAGAAGGAGCTGGAGAACGTTTTTGAGGGCCCTGCTGGGC
TTCTGTTTGGACACGCGCGCCCGGCCAATCCTGCCGTTCCCTTTGATGCG
CCAGGCTATGGCCCCACGCCCTCAGCGTCTCCGATCGCCTCCATAAAGGC
CGACTCCGGTTTGCTATTCACCGACAATAGTCGGGCGCAATACTGGGGCG
AAATCCCCCAAACATTCAATGCGACGGTCTTTGACCGAGCCGAGGAGAGC
ATCAAAGACCTCGTCCTCACCAACACATGGCCCAAGTTTGTTCGAGGTTG
CGGCCTCGCAGCTGAGGTTGGTTTGCTCGCGGAAAGCTAGATGTACGGCG
AGAGCTGCGCGCTAACCGATATGCAGGTAGCCTGGCGTGTTTGGACAGGT
GTTCTGGTCGTGGATTGTGGGCCCCGTCGTTCTCTGGAAATCCCGGCACA
TCCACGACACCCACGGCTGGAGAGTCCAGACGATAGGCTGCGTCATCGCC
AA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013098KJC3_013098Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013098-T2KJC3_013098-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013098-T2.cdsKJC3_013098-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013098-T2.utr3p1KJC3_013098-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013098-T2.exon2KJC3_013098-T2.exon2Aspergillus niger KJC3exon
KJC3_013098-T2.exon1KJC3_013098-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013098-T2.utr5p1KJC3_013098-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036305
DBxrefInterPro:IPR016137
DBxrefPFAM:PF00615
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:4480390..4482889 -
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