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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4485454..4487985+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013099-T1 ID=KJC3_013099-T1|Name=KJC3_013099-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2532bp|location=Sequence derived from alignment at ch6:4485454..4487985+ (Aspergillus niger KJC3)
CGTGCCCTTCCTCCGTTTCTTTATCTCATATGACGCTAAAGTAAATAGAC
GGAAAGTCTATTCCTCCGTCGGCCTTGGTTCCTGCAGCCAGACGTATAGG
TAAGAATGGATTTTCCGGAATCCTACAGTCTCGGCTTATTCCATGAATGG
TTAAAGCCGGATGGTACTCTACGAGTTACGGTATCCAACTGTTCATCCGG
AGTGGCAAAGTCCACACTTCAGGCGCGGCTGGACCTCCGAAGGTTACCAT
TACTCCTGAGAACAGTGTCAGAACAGCAAGAGGCTCTGGCTGGTCCCCCC
CTAGATCTCTGGCCGGTCACAGTCACAGTCGATCGACCTCCCTCCTACTC
TCCGTCGCCCACGGCAGTTGACCATGCCGAGCGGCGAAGATTATTCAATC
TCACCCGATAATATAAAGATACCCCATCACTCATGGAGGGTCTTTCCCAT
TCCACGTCGACACAGTCGAATGGAGAGCGATGATATGATGCCAAGTGCTG
GCCAGCGTCCTACAGACCCGGACATCCTTGTCGTGGAGGCGTGGGGACAA
GGATTCCTGGTGGGCTCCCTTATTGTCATGATTGCCATCACCGCGGCCAA
CATGAAAAAAGGGGTGCTCCTGCACAGACTCATCGTGGCAGAGGTAAGTT
GTGCTGTGTCTTTGGGGCGAAAGGGACGCTATCCCCTGCTGACGTGGACG
CTTAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCG
CCTGCGTATGGCTGGTATCTCTCGGTCACGGCCGTGGGTCTCACAATTTC
GCATTCCCTCCACAACGTGATTGCATGGATGAAGATCCGCGGCTTTTTCC
CACCCTGGGGCACGCGGCTCTATTTGATCACCCTGCTGGCGGCCCAGCCG
TACTGGGTCGTCGAGATCTATGCCAATTTTGCCTTTTTCAACCGGGGCCA
GGCCTTGTACACCACCACTCGGCCACTCGAGCCGCTTTTCCGGTGCGGTG
TTCGAGCGCAATTCTTTCCACGCCCGGCGTTGCTAATCCGAATATAGGGA
CCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACATCATCCAGCGTG
GGTATGGGTGTTCGCTGATGCAGCTGATCCGCATCAGCCCACGGTTCGGC
GTCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCAATGGTGGACAT
GTGTGCGATCCGGGTCGAGAATCGCCTAGGTTATCCTCCGGGCATGGAGC
CGTTCTGGAAGGTAAACAGCCGCCACTGACGAGAAAAAGATCAGCATGCT
AACCCTGCTGTAGTTAGCGTTTGTTTTCAAGTGCCTAAGCGACACCATCA
TCTTGGATGACTTCCGGAGCGCCCTGAACCGACTGCGCTATCACTATCAC
CCGGACGCGCCCCCACCGCAGGAGACCACGCACGCTCGCGGTCGGAGCAC
AAACCGGCTTGTGGACTGTGTGCCCGAGGCATCTATCAAACGCCCTGATC
CAGTATGTCGTCCACCTGACATGGTGTAAAGCCTGGAGTATCGTGTGTCG
GCGCCAACGCGCACGGCACAGGCTGAATATAAATGCTGGATCTGCTAGGT
ACATAGCCGCTACGCATGGGAAGGGGCGCGACACACGTCCGTGACACATC
CTCGCGTCTTTGTCTGGCGGACATGATGGAGACCCACTTCACCGAACCGC
TGGAGTTTAAATGATCACCTGTGCGGCTGATTCGTTCAACAACCAACGCC
ACCGACGATCAAATGCAGCTACGGGGTGGAAGTTTTTGTTTACGGAGTAG
ACAACGTATTCCTTTACCTTGGGATCGACAGACCAGGTTGCCCTCGCTCT
ACTACAGCCAGCACAAACATTCACTCTTCATTGAAGATAGCTATATACTC
TAGAATCGAGCAGATCTTAATTCCGGCCGGACAAGATTGGTGAAAGACAG
TGGTTCTAAACGATGTTCATTCCGACTCCATCTCCTTGTACCGAGCTGAG
CGACGGGATTTGGTGTGAGAGGTCGGGACACTCTCATAGGTGCTGCTCAC
TCTCCTGTGCAGGCGGTGATTTTCCTGGTTTTGATCTTCCATTTGTTCCT
CCAGCTTTCTATAGCTCTCCGTCAGCTCAAGGTCCCGTAGAGTATCACTT
GGTAACGCAATGAAGATAAGCTTACCGGACTCTAGCTTCGAGACTTGAAA
ATACAGATCAGCACCGTTCAAGAATGAATGACGGCCGGGTTTGGGACATC
ATATGACGGGACATACTCGCGGATCAACGACGCGAGAGCCTTCAGATCAT
CCACATTATTGGGATGCTCAGGAAGCTCGTTTGTGATCACGCTGTCGACC
TCCCACATTGCATCTCTGTCGCTTGCGCCGTTTTCCCGTTTTCTAGGGTT
AAAATGCCCTCACCCAAGGCGGCCTGAAAGTTCGGTTTCCTGTCATCTGG
CGGAGCTGATTCTGTGAAGTGCGAGGCATTAGACCAAATACCAGATTGCG
ATTTCTTTTCAGCTGATGCTAGTAGATTCCAG back to topCoding sequence (CDS) from alignment at ch6:4485454..4487985+ >KJC3_013099-T1 ID=KJC3_013099-T1|Name=KJC3_013099-T1|organism=Aspergillus niger KJC3|type=CDS|length=3948bp|location=Sequence derived from alignment at ch6:4485454..4487985+ (Aspergillus niger KJC3)
ATGCCGAGCGGCGAAGATTATTCAATCTCACCCGATAATATAAAGATACC
CCATCACTCATGGAGGGTCTTTCCCATTCCACGTCGACACAGTCGAATGG
AGAGCGATGATATGATGCCAAGTGCTGGCCAGCGTCCTACAGACCCGGAC
ATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTGGGCTCCCTTAT
TGTCATGATTGCCATCACCGCGGCCAACATGAAAAAAGGGGTGCTCCTGC
ACAGACTCATCGTGGCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTC
ATCTTTCTCCATGCGCCTGCGTATGGCTGGTATCTCTCGGTCACGGCCGT
GGGTCTCACAATTTCGCATTCCCTCCACAACGTGATTGCATGGATGAAGA
TCCGCGGCTTTTTCCCACCCTGGGGCACGCGGCTCTATTTGATCACCCTG
CTGGCGGCCCAGCCGTACTGGGTCGTCGAGATCTATGCCAATTTTGCCTT
TTTCAACCGGGGCCAGGCCTTGTACACCACCACTCGGCCACTCGAGCCGC
TTTTCCGGGACCCTTGGTGGATCTTCACCACCTGCTTTCTCCTGTACATC
ATCCAGCGTGGGTATGGGTGTTCGCTGATGCAGCTGATCCGCATCAGCCC
ACGGTTCGGCGTCATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCAA
TGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAGGTTATCCTCCG
GGCATGGAGCCGTTCTGGAAGTTAGCGTTTGTTTTCAAGTGCCTAAGCGA
CACCATCATCTTGGATGACTTCCGGAGCGCCCTGAACCGACTGCGCTATC
ACTATCACCCGGACGCGCCCCCACCGCAGGAGACCACGCACGCTCGCGGT
CGGAGCACAAACCGGCTTGTGGACTGTGTGCCCGAGGCATCTATCAAACG
CCCTGATCCAGTATGTCGTCCACCTGACATGGTGTAAATGCCGAGCGGCG
AAGATTATTCAATCTCACCCGATAATATAAAGATACCCCATCACTCATGG
AGGGTCTTTCCCATTCCACGTCGACACAGTCGAATGGAGAGCGATGATAT
GATGCCAAGTGCTGGCCAGCGTCCTACAGACCCGGACATCCTTGTCGTGG
AGGCGTGGGGACAAGGATTCCTGGTGGGCTCCCTTATTGTCATGATTGCC
ATCACCGCGGCCAACATGAAAAAAGGGGTGCTCCTGCACAGACTCATCGT
GGCAGAGCTCGCCCTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATG
CGCCTGCGTATGGCTGGTATCTCTCGGTCACGGCCGTGGGTCTCACAATT
TCGCATTCCCTCCACAACGTGATTGCATGGATGAAGATCCGCGGCTTTTT
CCCACCCTGGGGCACGCGGCTCTATTTGATCACCCTGCTGGCGGCCCAGC
CGTACTGGGTCGTCGAGATCTATGCCAATTTTGCCTTTTTCAACCGGGGC
CAGGCCTTGTACACCACCACTCGGCCACTCGAGCCGCTTTTCCGGGACCC
TTGGTGGATCTTCACCACCTGCTTTCTCCTGTACATCATCCAGCGTGGGT
ATGGGTGTTCGCTGATGCAGCTGATCCGCATCAGCCCACGGTTCGGCGTC
ATGCTCCTGTTCATGGTGATCTCCGTCGTGTTTGCAATGGTGGACATGTG
TGCGATCCGGGTCGAGAATCGCCTAGGTTATCCTCCGGGCATGGAGCCGT
TCTGGAAGTTAGCGTTTGTTTTCAAGTGCCTAAGCGACACCATCATCTTG
GATGACTTCCGGAGCGCCCTGAACCGACTGCGCTATCACTATCACCCGGA
CGCGCCCCCACCGCAGGAGACCACGCACGCTCGCGGTCGGAGCACAAACC
GGCTTGTGGACTGTGTGCCCGAGGCATCTATCAAACGCCCTGATCCAGTA
TGTCGTCCACCTGACATGGTGTAAATGCCGAGCGGCGAAGATTATTCAAT
CTCACCCGATAATATAAAGATACCCCATCACTCATGGAGGGTCTTTCCCA
TTCCACGTCGACACAGTCGAATGGAGAGCGATGATATGATGCCAAGTGCT
GGCCAGCGTCCTACAGACCCGGACATCCTTGTCGTGGAGGCGTGGGGACA
AGGATTCCTGGTGGGCTCCCTTATTGTCATGATTGCCATCACCGCGGCCA
ACATGAAAAAAGGGGTGCTCCTGCACAGACTCATCGTGGCAGAGCTCGCC
CTGGCCCTCGGGCACGGAACGTTCATCTTTCTCCATGCGCCTGCGTATGG
CTGGTATCTCTCGGTCACGGCCGTGGGTCTCACAATTTCGCATTCCCTCC
ACAACGTGATTGCATGGATGAAGATCCGCGGCTTTTTCCCACCCTGGGGC
ACGCGGCTCTATTTGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGT
CGAGATCTATGCCAATTTTGCCTTTTTCAACCGGGGCCAGGCCTTGTACA
CCACCACTCGGCCACTCGAGCCGCTTTTCCGGGACCCTTGGTGGATCTTC
ACCACCTGCTTTCTCCTGTACATCATCCAGCGTGGGTATGGGTGTTCGCT
GATGCAGCTGATCCGCATCAGCCCACGGTTCGGCGTCATGCTCCTGTTCA
TGGTGATCTCCGTCGTGTTTGCAATGGTGGACATGTGTGCGATCCGGGTC
GAGAATCGCCTAGGTTATCCTCCGGGCATGGAGCCGTTCTGGAAGTTAGC
GTTTGTTTTCAAGTGCCTAAGCGACACCATCATCTTGGATGACTTCCGGA
GCGCCCTGAACCGACTGCGCTATCACTATCACCCGGACGCGCCCCCACCG
CAGGAGACCACGCACGCTCGCGGTCGGAGCACAAACCGGCTTGTGGACTG
TGTGCCCGAGGCATCTATCAAACGCCCTGATCCAGTATGTCGTCCACCTG
ACATGGTGTAAATGCCGAGCGGCGAAGATTATTCAATCTCACCCGATAAT
ATAAAGATACCCCATCACTCATGGAGGGTCTTTCCCATTCCACGTCGACA
CAGTCGAATGGAGAGCGATGATATGATGCCAAGTGCTGGCCAGCGTCCTA
CAGACCCGGACATCCTTGTCGTGGAGGCGTGGGGACAAGGATTCCTGGTG
GGCTCCCTTATTGTCATGATTGCCATCACCGCGGCCAACATGAAAAAAGG
GGTGCTCCTGCACAGACTCATCGTGGCAGAGCTCGCCCTGGCCCTCGGGC
ACGGAACGTTCATCTTTCTCCATGCGCCTGCGTATGGCTGGTATCTCTCG
GTCACGGCCGTGGGTCTCACAATTTCGCATTCCCTCCACAACGTGATTGC
ATGGATGAAGATCCGCGGCTTTTTCCCACCCTGGGGCACGCGGCTCTATT
TGATCACCCTGCTGGCGGCCCAGCCGTACTGGGTCGTCGAGATCTATGCC
AATTTTGCCTTTTTCAACCGGGGCCAGGCCTTGTACACCACCACTCGGCC
ACTCGAGCCGCTTTTCCGGGACCCTTGGTGGATCTTCACCACCTGCTTTC
TCCTGTACATCATCCAGCGTGGGTATGGGTGTTCGCTGATGCAGCTGATC
CGCATCAGCCCACGGTTCGGCGTCATGCTCCTGTTCATGGTGATCTCCGT
CGTGTTTGCAATGGTGGACATGTGTGCGATCCGGGTCGAGAATCGCCTAG
GTTATCCTCCGGGCATGGAGCCGTTCTGGAAGTTAGCGTTTGTTTTCAAG
TGCCTAAGCGACACCATCATCTTGGATGACTTCCGGAGCGCCCTGAACCG
ACTGCGCTATCACTATCACCCGGACGCGCCCCCACCGCAGGAGACCACGC
ACGCTCGCGGTCGGAGCACAAACCGGCTTGTGGACTGTGTGCCCGAGGCA
TCTATCAAACGCCCTGATCCAGTATGTCGTCCACCTGACATGGTGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013099-T1.utr5p1 | KJC3_013099-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013099-T1.utr3p1 | KJC3_013099-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4485454..4487985 + |
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