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KJC3_013102-T1, KJC3_013102-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013102-T1
Unique NameKJC3_013102-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:1147336..1149272-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013102-T1 ID=KJC3_013102-T1|Name=KJC3_013102-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1937bp|location=Sequence derived from alignment at ch7:1147336..1149272- (Aspergillus niger KJC3)
AGAGAACAAACTATACAGCATAGTGGCTGCCAGAGCTGTAAGGCAGCAAT
ACCCCGCCCGTTTGCATAGAGACTGTGGCTGGAAGATGGCTGGGCTTTGA
TGAACATGAAGATAAAAAACCCGTCAGCTACATTATTGCTTGTGTTAACG
AAACTCAAGCATTCCAAATCTTAGTTAACCTACTACAAAAGCTTTGACAG
CCAAGAGTTAACGTCTTTTGGGTCTGACAGTTCGGATCGCCCATCTGTGG
CTTGCCTCTTTCTGTGGCTGATACTCCGGGGCCGGAACATTCTAGATCCG
GCAATCCTGTCGCTCCCTTCGGCGTCCCGTTGTTATCCCCGATCAATGCT
TCACAGCGCCACCACCTCAGCCTGTACATACTCATCATTTATTCCATCCG
TGACGACACCGCGTTGAGTTACCGAGTAGCCTGCAGCGGGCTGCATCGCA
TTCTACCCGTTGTTCAACACGCATCCGGTCGCAGCCCGAAGGCCGCCCGA
TAGCGGTATCATCAAGGCCCGATTCATATCGGGAACAACGACCAGAGAAC
GCGCAAGATGTCGCAGGCCCAGGACGATCCCGCGGCGGTTCTGGAACTGT
TCGTTCACGATGTGGCGAACCTTCCAGCTGAAATCAACCATCTGATGGAA
GAAATTCAGGCCAAGGACAAGATCATCCAAGAATGCCGCACGACCATCAA
CTCCCGCGACACCAGTCTCCAGAAATTCATCCGATTAAACGGCAGCTTAA
CGCCCAACCCGAAGGAAGAACAATACGGCAAGGCCATAATACAGAACCTC
GACAAGTCTCAGCAGCTACAGGATGAAAAGATCCAACTGAGCGAGAAAGC
GTGTGTGTTGCTGGACCGACATATTAGGAAACTGGATATCGCAATCCACA
AGCTGCAAAGTAACGGCATGCTCTCGAACGACCCTCCCATCCCCTCCCTT
TTCAACAACAAAGACCAATATCGCGACCCTCCCAAGATCTTCTTCCCCGA
TTCCACCGTCGAAAATTCCTCCTTCCCGTCTCCTCTCAATAGCGCCTCCG
CAAACGCCAATGTCATATTAGGCGCCACTCAGAAGCTGAATTCCCTGGGC
CGAAACGCCGCCGCACTCGCCCTGAACTCCCCGACTGCTGTGCGAAGCTC
CGCGCCAGCAACCCCCTCAGGAACAATCCACTTCCAACGACAACAGCGAG
AATCATCCGCCGGCGCAGTGGAGAACAAACGCCGGCGTCTCAACGCTTCA
CTGGGAACACTTCCTGCGGCCTCGTCCAACCTCCGACAATCGTCTCTCGG
TCCTGGTACACCCAAAGCCGGAACCCCCGCATCAAGTCGAGCCGGCAGCG
CAGGTCCGCGTTCAACAGCCTCAACCAAAAAGGCCTTAACCAAGAAAGTG
GCCCCGCACCAACAAGTCAAGAAGATCAAAGCCTCCGGGCTCAACGGAAA
GCAAACGAAGCGGTCCTCCAGCGCAAGCGGTCGTCTCAAAGTCAGCGGGA
CAAAACAATCACCATCCGCTGCTGGAGGAGACGAAGACGAGGACGACTCC
ATGCTCAGCAGCGCTGATATCTCGGATTCCGAGAACGCCGACGAGGGTAG
AAGAGACGAAGACATGGAGGACGAGGAAGAAGACGAAGGCAATGAAGATA
CCAAGGTTTATTGTACGTGTCGCAGTGTTAGCCATGGAGACATGGTTGCG
TGCGATAACGACAATTGCGAATTTGAATGGTTCCATTGGAAGTGTGTTGG
CTTGACGAGAGAACCCGTTGGAAAATGGTTCTGTCCACAGTGTTCGGCGA
AATTGCAGGCTTAGTTTATATAGTTATACCCCCTTCTTTCTCTTTCTCCG
TCTGTGTGTATTATAATGACCATATAGGATGTTATGACGGCGTTTATTTT
TCTTCTTTCCAGTCAATTCAGGATGCATTCGACTTTC
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Coding sequence (CDS) from alignment at ch7:1147336..1149272-

>KJC3_013102-T1 ID=KJC3_013102-T1|Name=KJC3_013102-T1|organism=Aspergillus niger KJC3|type=CDS|length=1257bp|location=Sequence derived from alignment at ch7:1147336..1149272- (Aspergillus niger KJC3)
ATGTCGCAGGCCCAGGACGATCCCGCGGCGGTTCTGGAACTGTTCGTTCA
CGATGTGGCGAACCTTCCAGCTGAAATCAACCATCTGATGGAAGAAATTC
AGGCCAAGGACAAGATCATCCAAGAATGCCGCACGACCATCAACTCCCGC
GACACCAGTCTCCAGAAATTCATCCGATTAAACGGCAGCTTAACGCCCAA
CCCGAAGGAAGAACAATACGGCAAGGCCATAATACAGAACCTCGACAAGT
CTCAGCAGCTACAGGATGAAAAGATCCAACTGAGCGAGAAAGCGTGTGTG
TTGCTGGACCGACATATTAGGAAACTGGATATCGCAATCCACAAGCTGCA
AAGTAACGGCATGCTCTCGAACGACCCTCCCATCCCCTCCCTTTTCAACA
ACAAAGACCAATATCGCGACCCTCCCAAGATCTTCTTCCCCGATTCCACC
GTCGAAAATTCCTCCTTCCCGTCTCCTCTCAATAGCGCCTCCGCAAACGC
CAATGTCATATTAGGCGCCACTCAGAAGCTGAATTCCCTGGGCCGAAACG
CCGCCGCACTCGCCCTGAACTCCCCGACTGCTGTGCGAAGCTCCGCGCCA
GCAACCCCCTCAGGAACAATCCACTTCCAACGACAACAGCGAGAATCATC
CGCCGGCGCAGTGGAGAACAAACGCCGGCGTCTCAACGCTTCACTGGGAA
CACTTCCTGCGGCCTCGTCCAACCTCCGACAATCGTCTCTCGGTCCTGGT
ACACCCAAAGCCGGAACCCCCGCATCAAGTCGAGCCGGCAGCGCAGGTCC
GCGTTCAACAGCCTCAACCAAAAAGGCCTTAACCAAGAAAGTGGCCCCGC
ACCAACAAGTCAAGAAGATCAAAGCCTCCGGGCTCAACGGAAAGCAAACG
AAGCGGTCCTCCAGCGCAAGCGGTCGTCTCAAAGTCAGCGGGACAAAACA
ATCACCATCCGCTGCTGGAGGAGACGAAGACGAGGACGACTCCATGCTCA
GCAGCGCTGATATCTCGGATTCCGAGAACGCCGACGAGGGTAGAAGAGAC
GAAGACATGGAGGACGAGGAAGAAGACGAAGGCAATGAAGATACCAAGGT
TTATTGTACGTGTCGCAGTGTTAGCCATGGAGACATGGTTGCGTGCGATA
ACGACAATTGCGAATTTGAATGGTTCCATTGGAAGTGTGTTGGCTTGACG
AGAGAACCCGTTGGAAAATGGTTCTGTCCACAGTGTTCGGCGAAATTGCA
GGCTTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013102KJC3_013102Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013102-T1KJC3_013102-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013102-T1.cdsKJC3_013102-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013102-T1.utr3p1KJC3_013102-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013102-T1.exon2KJC3_013102-T1.exon2Aspergillus niger KJC3exon
KJC3_013102-T1.exon1KJC3_013102-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013102-T1.utr5p2KJC3_013102-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_013102-T1.utr5p1KJC3_013102-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011011
DBxrefInterPro:IPR019787
DBxrefInterPro:IPR019786
DBxrefInterPro:IPR013083
DBxrefInterPro:IPR024610
DBxrefInterPro:IPR001965
DBxrefPFAM:PF12998
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:1147336..1149272 -
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