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KJC3_013106-T1, KJC3_013106-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013106-T1
Unique NameKJC3_013106-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3509816..3511599+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013106-T1 ID=KJC3_013106-T1|Name=KJC3_013106-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1784bp|location=Sequence derived from alignment at ch7:3509816..3511599+ (Aspergillus niger KJC3)
GCTTTACCGCAGCGTTTGGTGCTTCCCGGGGGTCCATCTGGGGTCAAGGT
GATAGGCAAGTAGTCTTAACGGTAATTTTCTGTTTCGGGATCTCCACCAC
TGCTTATTATCATGCGGGTTCAAATCTTATTGGATACCATGGATTACTGG
CTGACATCTTACGGCACTGTTCAGGTCACACTAATCGAAAGATACTCACG
ATGACCAATAGCTTTTTGGATGACGATGCCTATCGAACCCAGATGGCCGG
CCCCTGGGACGGGAATTCAGATTATGCTCCCACGCCAGGTATCTTCGGTC
GCACGCCCGCCACCTTATACTCTCCTAGCCCTGCCCCAGATTGTGCCACA
GACCAGCCGCAGCCCGATCATCTTAACTTTCTCCCATTGGCTGAATGGAA
AGAAGGTGGCGAATATGATGAGATGCCGCCAAGATATATCTGCTACACCA
TTGCATGGAGGGTTATCCTCAACCGGAAAACGGTAGGTAAAGTGACCGAG
GAAGACCTAGTAATAGCTCCTAGTGAGTACTGGGGAAAGAGCTTGCAAGC
GAATGTTGAAAACATGCTGCAAACGAAGAAAAAGCGCCACCAGCGAGTTA
GATCTGAAGGCACAGCCGTTACGGTGAAAGTGGACGAGCGGTCTCAGAAA
AACCTGGAAAAATTCTGTAATTCCACTAACATAAATTGGGTACCAGTGGA
GAAGCAGCTACGTAAGTGGAGCAATCTGCTTCGTATTGGCAGGAAGGTCA
CCATCGAGCTTGCCTTCACTTATAGGGAGGATGATGATGATGCCCGTTCT
ATGCCTTCATCAAGAAGAGTCGAAAAGAGAGGGCGTGTGTCTGCAACTAG
TAGAATGCTAGATGATTGTGAGGCACACATTGTGGCGGAGGAAGAGGCTA
CTGGGGAGCCTTCGACTTGGGAATATGTATATCGGCTAATGCGATGTGAT
GTCCGCTCATGTCCCCATAAGTCTGACTGGTGTTGGGAGGACCCGAAGGA
CAAGAAGCATTACAAACTCAGGAACCCTCATTTAGAACGGCTTATCGACT
ATGTCGATGAGGGTGGCATTCTAGACGGCCATGACGATGTTCCCAGCGAT
ATTCGTAGGGACCTAGTCCTAGAAAGCCAGACAGGAAGAAAGTCGAAAAA
GGCCGATACGTCAACACCGGAAGCACCGTATCATCCAACCATTATCAATG
TTTTATCCGGAAAAGATGGTAGTGCATCCACGGTCACCTCGGTCCCATCC
AAGACTTTGGCTGAGGAGCCTCTCGTTATTGCTGGACCTCGTGAATTGGC
CGTGAAAACATACTGCAAATGGCTGGAATCACGCGCTACAGAAGAAACTT
ATAAAGCCGATTTCCGCAAAATTTGCCAAGTGACTTTGGACAATCGCCTA
GATCTCGAATTGATCCTCGAGGATCCAGACACTGGCTTCTTCGTACAACA
AGGGGTTCCAATTGGAACTGCTCGTCGCTTTCTACGTGACATAAACGAAT
GGGCCACAGCGGTGAACTCAAACTCATTACCTGATCAGATCGTTGGATAA
CCACTCAGCTATGCCCAATAGTCTTAACAGCTGGTTTGTTCACAGTAACC
CAGGTATGGCCGGCTCCACAAAGGGTTCACTCCCATCATTATATTTCTGC
TGGTTGAGGAGGCATGCACATTGCGTTTTGGTCTGTTATCGCTTGCGTTT
GGATTATTGGCTTGTTATACAATTAGATCAGTACAGAATATCCCGAAATC
AATTCCGCTACTTACAGTAGTATTTGAAATCAAT
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Coding sequence (CDS) from alignment at ch7:3509816..3511599+

>KJC3_013106-T1 ID=KJC3_013106-T1|Name=KJC3_013106-T1|organism=Aspergillus niger KJC3|type=CDS|length=1350bp|location=Sequence derived from alignment at ch7:3509816..3511599+ (Aspergillus niger KJC3)
ATGACCAATAGCTTTTTGGATGACGATGCCTATCGAACCCAGATGGCCGG
CCCCTGGGACGGGAATTCAGATTATGCTCCCACGCCAGGTATCTTCGGTC
GCACGCCCGCCACCTTATACTCTCCTAGCCCTGCCCCAGATTGTGCCACA
GACCAGCCGCAGCCCGATCATCTTAACTTTCTCCCATTGGCTGAATGGAA
AGAAGGTGGCGAATATGATGAGATGCCGCCAAGATATATCTGCTACACCA
TTGCATGGAGGGTTATCCTCAACCGGAAAACGGTAGGTAAAGTGACCGAG
GAAGACCTAGTAATAGCTCCTAGTGAGTACTGGGGAAAGAGCTTGCAAGC
GAATGTTGAAAACATGCTGCAAACGAAGAAAAAGCGCCACCAGCGAGTTA
GATCTGAAGGCACAGCCGTTACGGTGAAAGTGGACGAGCGGTCTCAGAAA
AACCTGGAAAAATTCTGTAATTCCACTAACATAAATTGGGTACCAGTGGA
GAAGCAGCTACGTAAGTGGAGCAATCTGCTTCGTATTGGCAGGAAGGTCA
CCATCGAGCTTGCCTTCACTTATAGGGAGGATGATGATGATGCCCGTTCT
ATGCCTTCATCAAGAAGAGTCGAAAAGAGAGGGCGTGTGTCTGCAACTAG
TAGAATGCTAGATGATTGTGAGGCACACATTGTGGCGGAGGAAGAGGCTA
CTGGGGAGCCTTCGACTTGGGAATATGTATATCGGCTAATGCGATGTGAT
GTCCGCTCATGTCCCCATAAGTCTGACTGGTGTTGGGAGGACCCGAAGGA
CAAGAAGCATTACAAACTCAGGAACCCTCATTTAGAACGGCTTATCGACT
ATGTCGATGAGGGTGGCATTCTAGACGGCCATGACGATGTTCCCAGCGAT
ATTCGTAGGGACCTAGTCCTAGAAAGCCAGACAGGAAGAAAGTCGAAAAA
GGCCGATACGTCAACACCGGAAGCACCGTATCATCCAACCATTATCAATG
TTTTATCCGGAAAAGATGGTAGTGCATCCACGGTCACCTCGGTCCCATCC
AAGACTTTGGCTGAGGAGCCTCTCGTTATTGCTGGACCTCGTGAATTGGC
CGTGAAAACATACTGCAAATGGCTGGAATCACGCGCTACAGAAGAAACTT
ATAAAGCCGATTTCCGCAAAATTTGCCAAGTGACTTTGGACAATCGCCTA
GATCTCGAATTGATCCTCGAGGATCCAGACACTGGCTTCTTCGTACAACA
AGGGGTTCCAATTGGAACTGCTCGTCGCTTTCTACGTGACATAAACGAAT
GGGCCACAGCGGTGAACTCAAACTCATTACCTGATCAGATCGTTGGATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013106KJC3_013106Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013106-T1KJC3_013106-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013106-T1.utr5p1KJC3_013106-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_013106-T1.utr5p2KJC3_013106-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013106-T1.exon1KJC3_013106-T1.exon1Aspergillus niger KJC3exon
KJC3_013106-T1.exon2KJC3_013106-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013106-T1.cdsKJC3_013106-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013106-T1.utr3p1KJC3_013106-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3509816..3511599 +
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