You are here

Home

KJC3_013110-T1, KJC3_013110-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013110-T1
Unique NameKJC3_013110-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3537167..3538492+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013110-T1 ID=KJC3_013110-T1|Name=KJC3_013110-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1326bp|location=Sequence derived from alignment at ch7:3537167..3538492+ (Aspergillus niger KJC3)
GTTTCCTATACAACACAACATTTAACGATTTAGCCTTATCGCAAATATGC
CAACCGAACAGGCTCCACCAATCATTGACTTTTCGCGTACGTCTACTCTT
TTCATTATCATTAGACACTTTGAAGTTGAAACGCTGGGTCTCTGCGATCA
GTTAATTGATCTTTATCCTTGAAGCTTTCTACGAGAAAGATCAGTCCGCG
AGACGGGGACTGATCAATCAAGTTCGCTCTGCATGTGAAAGCTTCGGCTT
CTTTCAGATTGTCAACCATGGCGTTCCCGAGTCCCTTCGTCAGGATATCT
TAAAGCAATCGGCCGATTTTTTTAAACTCTCTCTGGAGATAAAGGAGAAG
TATAACAAGGGTGATTCACTCCGTCATGTTCATATTTGTAGAGTTTTTAA
CTGACATGGCGAATCGCTAGATATTGGCGGATTCAACCGTGGCTACGAGC
GCCTGCGAGCACAGAACTTCGAGAAAAAAACGGAGGGTGACTTGAAAGAG
GGTTATTACTTTGGCACCGATCTTCCTCTCGATCACCCTTACGTTGTTGG
ACGTAAAATCAATCTAGGACCCAACAAATATCCAGAAGATGTATCCGACC
CAACGGCATTCAAGGTGATTGTCGATAGCTATTTCGAAAGTGTGGAGAAG
CTGGCACATGATATATTGAGAATTTTGGCTTCTACATTGAACTTGGATGA
GGATTTCTTCCAAGACTATGTCGACACACCCATCGCTATATTGCGTCTAC
TGCATTATCCTCCCCAGCCGGCTAATGCATCTTCTGATGAGAGAGGTATG
AGAGCCGTGGACGTCGTGGAAAATAAGAAGTCTCTAACAATGGGTGGAAT
CAGGAATTGGGGCTCACACTGACTTTGGTGGCATCACCATTCTTCTACAA
GACATGATCGGTGGCCTCCAAGTGTGGAATAAAGACCACTCGACTTGGGT
TGATGTGAAGCCTCTGGAGGGCGCCTTCGTCGTCAACCTTGGCAACATGA
TGATGCGCTGGACGAATGATCGTTACTTGTCCAATCTACACCGTGTGATC
AACAAGACGGGGAAAGAACGTTACTCTGTCCCCTTTTTTTTCTCTGGTAA
CCCAGAATATGTTGTGAAATGTCTGCCAAGCTGCGAGGAAGCCAGCGGCG
GCGCAAAGTACCCCCCTATCTCGGTCGAGGAGTGGATTACAGGACGATAC
GCGGATACTTACGGTACGAAGGATAATGCCACGGCAATGAAGGATCTGTC
AGTCGAAGCAGAGAAGGCCTATGCATGATCGTACACCATGACAAAGGAAA
AGAAAAGGAAGGGAAAATAAATAAAG
back to top

Coding sequence (CDS) from alignment at ch7:3537167..3538492+

>KJC3_013110-T1 ID=KJC3_013110-T1|Name=KJC3_013110-T1|organism=Aspergillus niger KJC3|type=CDS|length=4104bp|location=Sequence derived from alignment at ch7:3537167..3538492+ (Aspergillus niger KJC3)
ATGCCAACCGAACAGGCTCCACCAATCATTGACTTTTCGCCTTTCTACGA
GAAAGATCAGTCCGCGAGACGGGGACTGATCAATCAAGTTCGCTCTGCAT
GTGAAAGCTTCGGCTTCTTTCAGATTGTCAACCATGGCGTTCCCGAGTCC
CTTCGTCAGGATATCTTAAAGCAATCGGCCGATTTTTTTAAACTCTCTCT
GGAGATAAAGGAGAAGTATAACAAGGATATTGGCGGATTCAACCGTGGCT
ACGAGCGCCTGCGAGCACAGAACTTCGAGAAAAAAACGGAGGGTGACTTG
AAAGAGGGTTATTACTTTGGCACCGATCTTCCTCTCGATCACCCTTACGT
TGTTGGACGTAAAATCAATCTAGGACCCAACAAATATCCAGAAGATGTAT
CCGACCCAACGGCATTCAAGGTGATTGTCGATAGCTATTTCGAAAGTGTG
GAGAAGCTGGCACATGATATATTGAGAATTTTGGCTTCTACATTGAACTT
GGATGAGGATTTCTTCCAAGACTATGTCGACACACCCATCGCTATATTGC
GTCTACTGCATTATCCTCCCCAGCCGGCTAATGCATCTTCTGATGAGAGA
GGAATTGGGGCTCACACTGACTTTGGTGGCATCACCATTCTTCTACAAGA
CATGATCGGTGGCCTCCAAGTGTGGAATAAAGACCACTCGACTTGGGTTG
ATGTGAAGCCTCTGGAGGGCGCCTTCGTCGTCAACCTTGGCAACATGATG
ATGCGCTGGACGAATGATCGTTACTTGTCCAATCTACACCGTGTGATCAA
CAAGACGGGGAAAGAACGTTACTCTGTCCCCTTTTTTTTCTCTGGTAACC
CAGAATATGTTGTGAAATGTCTGCCAAGCTGCGAGGAAGCCAGCGGCGGC
GCAAAGTACCCCCCTATCTCGGTCGAGGAGTGGATTACAGGACGATACGC
GGATACTTACGGTACGAAGGATAATGCCACGGCAATGAAGGATCTGTCAG
TCGAAGCAGAGAAGGCCTATGCATGAATGCCAACCGAACAGGCTCCACCA
ATCATTGACTTTTCGCCTTTCTACGAGAAAGATCAGTCCGCGAGACGGGG
ACTGATCAATCAAGTTCGCTCTGCATGTGAAAGCTTCGGCTTCTTTCAGA
TTGTCAACCATGGCGTTCCCGAGTCCCTTCGTCAGGATATCTTAAAGCAA
TCGGCCGATTTTTTTAAACTCTCTCTGGAGATAAAGGAGAAGTATAACAA
GGATATTGGCGGATTCAACCGTGGCTACGAGCGCCTGCGAGCACAGAACT
TCGAGAAAAAAACGGAGGGTGACTTGAAAGAGGGTTATTACTTTGGCACC
GATCTTCCTCTCGATCACCCTTACGTTGTTGGACGTAAAATCAATCTAGG
ACCCAACAAATATCCAGAAGATGTATCCGACCCAACGGCATTCAAGGTGA
TTGTCGATAGCTATTTCGAAAGTGTGGAGAAGCTGGCACATGATATATTG
AGAATTTTGGCTTCTACATTGAACTTGGATGAGGATTTCTTCCAAGACTA
TGTCGACACACCCATCGCTATATTGCGTCTACTGCATTATCCTCCCCAGC
CGGCTAATGCATCTTCTGATGAGAGAGGAATTGGGGCTCACACTGACTTT
GGTGGCATCACCATTCTTCTACAAGACATGATCGGTGGCCTCCAAGTGTG
GAATAAAGACCACTCGACTTGGGTTGATGTGAAGCCTCTGGAGGGCGCCT
TCGTCGTCAACCTTGGCAACATGATGATGCGCTGGACGAATGATCGTTAC
TTGTCCAATCTACACCGTGTGATCAACAAGACGGGGAAAGAACGTTACTC
TGTCCCCTTTTTTTTCTCTGGTAACCCAGAATATGTTGTGAAATGTCTGC
CAAGCTGCGAGGAAGCCAGCGGCGGCGCAAAGTACCCCCCTATCTCGGTC
GAGGAGTGGATTACAGGACGATACGCGGATACTTACGGTACGAAGGATAA
TGCCACGGCAATGAAGGATCTGTCAGTCGAAGCAGAGAAGGCCTATGCAT
GAATGCCAACCGAACAGGCTCCACCAATCATTGACTTTTCGCCTTTCTAC
GAGAAAGATCAGTCCGCGAGACGGGGACTGATCAATCAAGTTCGCTCTGC
ATGTGAAAGCTTCGGCTTCTTTCAGATTGTCAACCATGGCGTTCCCGAGT
CCCTTCGTCAGGATATCTTAAAGCAATCGGCCGATTTTTTTAAACTCTCT
CTGGAGATAAAGGAGAAGTATAACAAGGATATTGGCGGATTCAACCGTGG
CTACGAGCGCCTGCGAGCACAGAACTTCGAGAAAAAAACGGAGGGTGACT
TGAAAGAGGGTTATTACTTTGGCACCGATCTTCCTCTCGATCACCCTTAC
GTTGTTGGACGTAAAATCAATCTAGGACCCAACAAATATCCAGAAGATGT
ATCCGACCCAACGGCATTCAAGGTGATTGTCGATAGCTATTTCGAAAGTG
TGGAGAAGCTGGCACATGATATATTGAGAATTTTGGCTTCTACATTGAAC
TTGGATGAGGATTTCTTCCAAGACTATGTCGACACACCCATCGCTATATT
GCGTCTACTGCATTATCCTCCCCAGCCGGCTAATGCATCTTCTGATGAGA
GAGGAATTGGGGCTCACACTGACTTTGGTGGCATCACCATTCTTCTACAA
GACATGATCGGTGGCCTCCAAGTGTGGAATAAAGACCACTCGACTTGGGT
TGATGTGAAGCCTCTGGAGGGCGCCTTCGTCGTCAACCTTGGCAACATGA
TGATGCGCTGGACGAATGATCGTTACTTGTCCAATCTACACCGTGTGATC
AACAAGACGGGGAAAGAACGTTACTCTGTCCCCTTTTTTTTCTCTGGTAA
CCCAGAATATGTTGTGAAATGTCTGCCAAGCTGCGAGGAAGCCAGCGGCG
GCGCAAAGTACCCCCCTATCTCGGTCGAGGAGTGGATTACAGGACGATAC
GCGGATACTTACGGTACGAAGGATAATGCCACGGCAATGAAGGATCTGTC
AGTCGAAGCAGAGAAGGCCTATGCATGAATGCCAACCGAACAGGCTCCAC
CAATCATTGACTTTTCGCCTTTCTACGAGAAAGATCAGTCCGCGAGACGG
GGACTGATCAATCAAGTTCGCTCTGCATGTGAAAGCTTCGGCTTCTTTCA
GATTGTCAACCATGGCGTTCCCGAGTCCCTTCGTCAGGATATCTTAAAGC
AATCGGCCGATTTTTTTAAACTCTCTCTGGAGATAAAGGAGAAGTATAAC
AAGGATATTGGCGGATTCAACCGTGGCTACGAGCGCCTGCGAGCACAGAA
CTTCGAGAAAAAAACGGAGGGTGACTTGAAAGAGGGTTATTACTTTGGCA
CCGATCTTCCTCTCGATCACCCTTACGTTGTTGGACGTAAAATCAATCTA
GGACCCAACAAATATCCAGAAGATGTATCCGACCCAACGGCATTCAAGGT
GATTGTCGATAGCTATTTCGAAAGTGTGGAGAAGCTGGCACATGATATAT
TGAGAATTTTGGCTTCTACATTGAACTTGGATGAGGATTTCTTCCAAGAC
TATGTCGACACACCCATCGCTATATTGCGTCTACTGCATTATCCTCCCCA
GCCGGCTAATGCATCTTCTGATGAGAGAGGAATTGGGGCTCACACTGACT
TTGGTGGCATCACCATTCTTCTACAAGACATGATCGGTGGCCTCCAAGTG
TGGAATAAAGACCACTCGACTTGGGTTGATGTGAAGCCTCTGGAGGGCGC
CTTCGTCGTCAACCTTGGCAACATGATGATGCGCTGGACGAATGATCGTT
ACTTGTCCAATCTACACCGTGTGATCAACAAGACGGGGAAAGAACGTTAC
TCTGTCCCCTTTTTTTTCTCTGGTAACCCAGAATATGTTGTGAAATGTCT
GCCAAGCTGCGAGGAAGCCAGCGGCGGCGCAAAGTACCCCCCTATCTCGG
TCGAGGAGTGGATTACAGGACGATACGCGGATACTTACGGTACGAAGGAT
AATGCCACGGCAATGAAGGATCTGTCAGTCGAAGCAGAGAAGGCCTATGC
ATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013110KJC3_013110Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013110-T1KJC3_013110-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013110-T1.utr5p1KJC3_013110-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013110-T1.exon1KJC3_013110-T1.exon1Aspergillus niger KJC3exon
KJC3_013110-T1.exon2KJC3_013110-T1.exon2Aspergillus niger KJC3exon
KJC3_013110-T1.exon3KJC3_013110-T1.exon3Aspergillus niger KJC3exon
KJC3_013110-T1.exon4KJC3_013110-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013110-T1.cdsKJC3_013110-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013110-T1.utr3p1KJC3_013110-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027443
DBxrefInterPro:IPR026992
DBxrefInterPro:IPR005123
DBxrefPFAM:PF14226
DBxrefPFAM:PF03171
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3537167..3538492 +
Powered by Drupal