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KJC3_013113-T1, KJC3_013113-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013113-T1
Unique NameKJC3_013113-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3586027..3587397+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013113-T1 ID=KJC3_013113-T1|Name=KJC3_013113-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1371bp|location=Sequence derived from alignment at ch7:3586027..3587397+ (Aspergillus niger KJC3)
AGGAACCATCCAGGAGATCACGTCGATCATCCTCCGCGTCACAAATGGCT
CCCAATCTAGCTCCATCGACTATAGAGTTCATCCGTGACATGATCTTGAG
CAATGAACTCACTCCTTCACAAATCGCAGATGCGGCGGGCTGTAACCCAA
GTGCTGTCACTAGACATATCAACAATCTGAACATATTTGGGAGTGTGAAG
GCCCCTCCCATCAGGCGTGGGCGTCCACGCCGTCTCACACCAGAGATGGT
TAAAGCTCTGTGTGATCATCTCTTGGAAAAGCCTTACTTATACCTTGATG
AAATGGCCATATTTCTGTGGGACGAGTTTCAGGTACAAGTAACAACGTGC
AGCATCAGTCGTTCTCTCAAACGCGAAGGCTGGTCTAAGAAGACTGCTAA
GCAAAAGGCTATAGAGCGTAATGCGGATTTGCGCGACACCTATGTTCACT
ATATATCGGATTTCTCCTCTCGCCATCTTTTGTTTGTCGACGAATCCGGA
TGTGATAGGAGAATAGGCTTCAGAAGGACAGGCTGGTCTCCTCTTGGCTT
AGCACCTATACAAGTAGCCAAATTCCACCGCGATCAGCGGTATCAAATCC
TTCCGGCATATTCTCAAGATGGAATTTTTTTTTCCCGCATTTTTCAAGGG
TCTACAGACGCCTCTGTGTTTGAGGATTTTATTGAGGAACTACTTCAACA
CTGCGGAAGATGGCCAGAACCGAAATCAGTGATTGTAATGGATAATGCAT
CCTTTCATCACTCAGAGAAAATCGAAGAATTGTGCTCGCAAGCAGGTGTC
AAGATTGTATATCTACCCCCATATTCCCCGGATTTGAATCCAATCGAAGA
GTTCTTCTCGGAGCTAAAGGCGTTCATAAGACGGCATTGGCAGACTTATG
AAGACAATCCTGAGCAGGGATTCGCCTCCTTTCTTGACTGGTGCGTTAAT
ACCGTGGGCACGAGGAAATCAAGTGCAGAAGGGCATTTTCGAAATGCCGG
CCTGACACTTGACGAAGTGTAGACCGCATACGGTAGGTACCGCGTGATAA
ATTGAACATTGATTCTTCGGCGGCCTTCTAACACAAATTACGATATAGTC
AACCTCAGTATCATATAAACTTCAGTGTCATAGCTGATGACCGGAGTCCA
CCCGACTCGGGGGAGCTCAACAGGAATGCAATAAACAAGAATGTAACACA
AGACCTAGCAGGCAGCCAATGTATCTAACCAGCCACTGAGCCGAAGATTC
ATGATGAGTCCCAAGTTTGTTGAGCCGTCTGCTTTTACAGTTACTTCCTC
TATATCACGAAGAATACTCTCCATGTAATCTCCCGCACCGCTGATTTTTA
TAATGCACGCGATGGCACGGT
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Coding sequence (CDS) from alignment at ch7:3586027..3587397+

>KJC3_013113-T1 ID=KJC3_013113-T1|Name=KJC3_013113-T1|organism=Aspergillus niger KJC3|type=CDS|length=978bp|location=Sequence derived from alignment at ch7:3586027..3587397+ (Aspergillus niger KJC3)
ATGGCTCCCAATCTAGCTCCATCGACTATAGAGTTCATCCGTGACATGAT
CTTGAGCAATGAACTCACTCCTTCACAAATCGCAGATGCGGCGGGCTGTA
ACCCAAGTGCTGTCACTAGACATATCAACAATCTGAACATATTTGGGAGT
GTGAAGGCCCCTCCCATCAGGCGTGGGCGTCCACGCCGTCTCACACCAGA
GATGGTTAAAGCTCTGTGTGATCATCTCTTGGAAAAGCCTTACTTATACC
TTGATGAAATGGCCATATTTCTGTGGGACGAGTTTCAGGTACAAGTAACA
ACGTGCAGCATCAGTCGTTCTCTCAAACGCGAAGGCTGGTCTAAGAAGAC
TGCTAAGCAAAAGGCTATAGAGCGTAATGCGGATTTGCGCGACACCTATG
TTCACTATATATCGGATTTCTCCTCTCGCCATCTTTTGTTTGTCGACGAA
TCCGGATGTGATAGGAGAATAGGCTTCAGAAGGACAGGCTGGTCTCCTCT
TGGCTTAGCACCTATACAAGTAGCCAAATTCCACCGCGATCAGCGGTATC
AAATCCTTCCGGCATATTCTCAAGATGGAATTTTTTTTTCCCGCATTTTT
CAAGGGTCTACAGACGCCTCTGTGTTTGAGGATTTTATTGAGGAACTACT
TCAACACTGCGGAAGATGGCCAGAACCGAAATCAGTGATTGTAATGGATA
ATGCATCCTTTCATCACTCAGAGAAAATCGAAGAATTGTGCTCGCAAGCA
GGTGTCAAGATTGTATATCTACCCCCATATTCCCCGGATTTGAATCCAAT
CGAAGAGTTCTTCTCGGAGCTAAAGGCGTTCATAAGACGGCATTGGCAGA
CTTATGAAGACAATCCTGAGCAGGGATTCGCCTCCTTTCTTGACTGGTGC
GTTAATACCGTGGGCACGAGGAAATCAAGTGCAGAAGGGCATTTTCGAAA
TGCCGGCCTGACACTTGACGAAGTGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013113KJC3_013113Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013113-T1KJC3_013113-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013113-T1.utr5p1KJC3_013113-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013113-T1.exon1KJC3_013113-T1.exon1Aspergillus niger KJC3exon
KJC3_013113-T1.exon2KJC3_013113-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013113-T1.cdsKJC3_013113-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013113-T1.utr3p1KJC3_013113-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_013113-T1.utr3p2KJC3_013113-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR009057
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR038717
DBxrefInterPro:IPR025959
DBxrefPFAM:PF13592
DBxrefPFAM:PF13358
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3586027..3587397 +
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