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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:3586028..3588564- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_013114-T1 ID=KJC3_013114-T1|Name=KJC3_013114-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2537bp|location=Sequence derived from alignment at ch7:3586028..3588564- (Aspergillus niger KJC3)
GTCCAATGCACTCCTGCGAAGATGCCGTCGGGGCACACCCGCCACCAGGT
CTCTCTGGAGGCTGTTTTGGATTTCTCACAGCCATTCACTCTACCACCAG
ATCAAAGTCGGACAGCAACCATTGTTTTTTATCAACTCATCAATCACTAC
AATACCGAGCAGGTTGCACGCAAAGGGTACAGACCTGCTGCGCTTGCCCA
GGCTGTCTTTGATCACGTTTCATCTAAAGACGCATTTCTAGTTCTCTTCC
TTTCATTTGTACATGATACATTATGCTCGCAATCAAACAATGCGCAAAGC
TCTGACTTCACTCCTTGCCTGCTCTATTTCGATGGTTTCGCCTCATGGAA
TTTAGAGAAGTTGAAGAGCACCAGGGACGCAATTGAAAACTTTGCTGAGT
ATATTATTGAAAATCTGCTCCTTCCACGTACCATGCCCGCCATCTGGAAT
CTGAGATTACTATAAAACAGTCTACTAACTGAGTTTATATTGTTAGTCAG
AGCTTCATCAGTCAAAACTCCACAGCCCACGCCTGCATCCCTGTCTTCCT
TACAAGCGGCCGCGACAGCCAATTCAGCACAACGTTTATCTACTTTAAGA
CAGAGTTGCCTTATACGAGATCATCATCGGTGCGTGATTTCTCGGAAGTT
CGATCGACGCGAAGCCGAAAGGCGTCTCCAGCAAAACGGGGAAGACTGCA
AAGATGATGATGGAAACCTTCTTCGGAATGAGTCTAGTGACCGGTTTCAA
TTCCTAGAAGTTGCTCACATCCTACCTCACTCTCTAACGTCCGTCGCTTC
GGATAACGCTGAACTGGTAGGAAAGCCCCGGGTTTTCGTTATAACTTCAT
TAACGAGGTATCACAGAGTGATTCGAAGAAAAATGCTCTCCAGATTCTGA
ATATGTTCGACCACGGAATAACCCATCTCATCGAATACCCCAAGATTGAT
AGCCCCCTGAATGCTTTGACACTAACACATGACTACCATCAACTATTCGG
CGCATTCAAAATATATTTCGAGCACACAGGCGCCCCATATCAATATGAGA
TCAAGTCGACAGAGCAAAGTTCATTTTTAAGCGATCCCTTATTACCAGTC
GTTCGCACGCTGACCCTTAGCCCCAACCGTACCATCGACCCGCCATCTCA
TCGGCTTCTCGCTGTTCACCGTGCCATCGCGTGCATTATAAAAATCAGCG
GTGCGGGAGATTACATGGAGAGTATTCTTCGTGATATAGAGGAAGTAACT
GTAAAAGCAGACGGCTCAACAAACTTGGGACTCATCATGAATCTTCGGCT
CAGTGGCTGGTTAGATACATTGGCTGCCTGCTAGGTCTTGTGTTACATTC
TTGTTTATTGCATTCCTGTTGAGCTCCCCCGAGTCGGGTGGACTCCGGTC
ATCAGCTATGACACTGAAGTTTATATGATACTGAGGTTGACTATATCGTA
ATTTGTGTTAGAAGGCCGCCGAAGAATCAATGTTCAATTTATCACGCGGT
ACCTACCGTATGCGGTCTACACTTCGTCAAGTGTCAGGCCGGCATTTCGA
AAATGCCCTTCTGCACTTGATTTCCTCGTGCCCACGGTATTAACGCACCA
GTCAAGAAAGGAGGCGAATCCCTGCTCAGGATTGTCTTCATAAGTCTGCC
AATGCCGTCTTATGAACGCCTTTAGCTCCGAGAAGAACTCTTCGATTGGA
TTCAAATCCGGGGAATATGGGGGTAGATATACAATCTTGACACCTGCTTG
CGAGCACAATTCTTCGATTTTCTCTGAGTGATGAAAGGATGCATTATCCA
TTACAATCACTGATTTCGGTTCTGGCCATCTTCCGCAGTGTTGAAGTAGT
TCCTCAATAAAATCCTCAAACACAGAGGCGTCTGTAGACCCTTGAAAAAT
GCGGGAAAAAAAAATTCCATCTTGAGAATATGCCGGAAGGATTTGATACC
GCTGATCGCGGTGGAATTTGGCTACTTGTATAGGTGCTAAGCCAAGAGGA
GACCAGCCTGTCCTTCTGAAGCCTATTCTCCTATCACATCCGGATTCGTC
GACAAACAAAAGATGGCGAGAGGAGAAATCCGATATATAGTGAACATAGG
TGTCGCGCAAATCCGCATTACGCTCTATAGCCTTTTGCTTAGCAGTCTTC
TTAGACCAGCCTTCGCGTTTGAGAGAACGACTGATGCTGCACGTTGTTAC
TTGTACCTGAAACTCGTCCCACAGAAATATGGCCATTTCATCAAGGTATA
AGTAAGGCTTTTCCAAGAGATGATCACACAGAGCTTTAACCATCTCTGGT
GTGAGACGGCGTGGACGCCCACGCCTGATGGGAGGGGCCTTCACACTCCC
AAATATGTTCAGATTGTTGATATGTCTAGTGACAGCACTTGGGTTACAGC
CCGCCGCATCTGCGATTTGTGAAGGAGTGAGTTCATTGCTCAAGATCATG
TCACGGATGAACTCTATAGTCGATGGAGCTAGATTGGGAGCCATTTGTGA
CGCGGAGGATGATCGACGTGATCTCCTGGATGGTTCC back to topCoding sequence (CDS) from alignment at ch7:3586028..3588564- >KJC3_013114-T1 ID=KJC3_013114-T1|Name=KJC3_013114-T1|organism=Aspergillus niger KJC3|type=CDS|length=3582bp|location=Sequence derived from alignment at ch7:3586028..3588564- (Aspergillus niger KJC3)
AGTGATTCGAAGAAAAATGCTCTCCAGATTCTGAATATGTTCGACCACGG
AATAACCCATCTCATCGAATACCCCAAGATTGATAGCCCCCTGAATGCTT
TGACACTAACACATGACTACCATCAACTATTCGGCGCATTCAAAATATAT
TTCGAGCACACAGGCGCCCCATATCAATATGAGATCAAGTCGACAGAGCA
AAGTTCATTTTTAAGCGATCCCTTATTACCAGTCGTTCGCACGCTGACCC
TTAGCCCCAACCGTACCATCGACCCGCCATCTCATCGGCTTCTCGCTGTT
CACCGTGCCATCGCGTGCATTATAAAAATCAGCGGTGCGGGAGATTACAT
GGAGAGTATTCTTCGTGATATAGAGGAAGTAACTGTAAAAGCAGACGGCT
CAACAAACTTGGGACTCATCATGAATCTTCGGCTCAGTGGCTGGTTAGAT
ACATTGGCTGCCTGCTAGTCAGAGCTTCATCAGTCAAAACTCCACAGCCC
ACGCCTGCATCCCTGTCTTCCTTACAAGCGGCCGCGACAGCCAATTCAGC
ACAACGTTTATCTACTTTAAGACAGAGTTGCCTTATACGAGATCATCATC
GGTGCGTGATTTCTCGGAAGTTCGATCGACGCGAAGCCGAAAGGCGTCTC
CAGCAAAACGGGGAAGACTGCAAAGATGATGATGGAAACCTTCTTCGGAA
TGAGTCTAGTGACCGGTTTCAATTCCTAGAAGTTGCTCACATCCTACCTC
ACTCTCTAACGTCCGTCGCTTCGGATAACGCTGAACTGATGCCGTCGGGG
CACACCCGCCACCAGGTCTCTCTGGAGGCTGTTTTGGATTTCTCACAGCC
ATTCACTCTACCACCAGATCAAAGTCGGACAGCAACCATTGTTTTTTATC
AACTCATCAATCACTACAATACCGAGCAGGTTGCACGCAAAGGGTACAGA
CCTGCTGCGCTTGCCCAGGCTGTCTTTGATCACGTTTCATCTAAAGACGC
ATTTCTAGTTCTCTTCCTTTCATTTGTACATGATACATTATGCTCGCAAT
CAAACAATGCGCAAAGCTCTGACTTCACTCCTTGCCTGCTCTATTTCGAT
GGTTTCGCCTCATGGAATTTAGAGAAGTTGAAGAGCACCAGGGACGCAAT
TGAAAACTTTGCTGAGTATATTATTGAAAATCTGCTCCTTCCACAGTGAT
TCGAAGAAAAATGCTCTCCAGATTCTGAATATGTTCGACCACGGAATAAC
CCATCTCATCGAATACCCCAAGATTGATAGCCCCCTGAATGCTTTGACAC
TAACACATGACTACCATCAACTATTCGGCGCATTCAAAATATATTTCGAG
CACACAGGCGCCCCATATCAATATGAGATCAAGTCGACAGAGCAAAGTTC
ATTTTTAAGCGATCCCTTATTACCAGTCGTTCGCACGCTGACCCTTAGCC
CCAACCGTACCATCGACCCGCCATCTCATCGGCTTCTCGCTGTTCACCGT
GCCATCGCGTGCATTATAAAAATCAGCGGTGCGGGAGATTACATGGAGAG
TATTCTTCGTGATATAGAGGAAGTAACTGTAAAAGCAGACGGCTCAACAA
ACTTGGGACTCATCATGAATCTTCGGCTCAGTGGCTGGTTAGATACATTG
GCTGCCTGCTAGTCAGAGCTTCATCAGTCAAAACTCCACAGCCCACGCCT
GCATCCCTGTCTTCCTTACAAGCGGCCGCGACAGCCAATTCAGCACAACG
TTTATCTACTTTAAGACAGAGTTGCCTTATACGAGATCATCATCGGTGCG
TGATTTCTCGGAAGTTCGATCGACGCGAAGCCGAAAGGCGTCTCCAGCAA
AACGGGGAAGACTGCAAAGATGATGATGGAAACCTTCTTCGGAATGAGTC
TAGTGACCGGTTTCAATTCCTAGAAGTTGCTCACATCCTACCTCACTCTC
TAACGTCCGTCGCTTCGGATAACGCTGAACTGATGCCGTCGGGGCACACC
CGCCACCAGGTCTCTCTGGAGGCTGTTTTGGATTTCTCACAGCCATTCAC
TCTACCACCAGATCAAAGTCGGACAGCAACCATTGTTTTTTATCAACTCA
TCAATCACTACAATACCGAGCAGGTTGCACGCAAAGGGTACAGACCTGCT
GCGCTTGCCCAGGCTGTCTTTGATCACGTTTCATCTAAAGACGCATTTCT
AGTTCTCTTCCTTTCATTTGTACATGATACATTATGCTCGCAATCAAACA
ATGCGCAAAGCTCTGACTTCACTCCTTGCCTGCTCTATTTCGATGGTTTC
GCCTCATGGAATTTAGAGAAGTTGAAGAGCACCAGGGACGCAATTGAAAA
CTTTGCTGAGTATATTATTGAAAATCTGCTCCTTCCACAGTGATTCGAAG
AAAAATGCTCTCCAGATTCTGAATATGTTCGACCACGGAATAACCCATCT
CATCGAATACCCCAAGATTGATAGCCCCCTGAATGCTTTGACACTAACAC
ATGACTACCATCAACTATTCGGCGCATTCAAAATATATTTCGAGCACACA
GGCGCCCCATATCAATATGAGATCAAGTCGACAGAGCAAAGTTCATTTTT
AAGCGATCCCTTATTACCAGTCGTTCGCACGCTGACCCTTAGCCCCAACC
GTACCATCGACCCGCCATCTCATCGGCTTCTCGCTGTTCACCGTGCCATC
GCGTGCATTATAAAAATCAGCGGTGCGGGAGATTACATGGAGAGTATTCT
TCGTGATATAGAGGAAGTAACTGTAAAAGCAGACGGCTCAACAAACTTGG
GACTCATCATGAATCTTCGGCTCAGTGGCTGGTTAGATACATTGGCTGCC
TGCTAGTCAGAGCTTCATCAGTCAAAACTCCACAGCCCACGCCTGCATCC
CTGTCTTCCTTACAAGCGGCCGCGACAGCCAATTCAGCACAACGTTTATC
TACTTTAAGACAGAGTTGCCTTATACGAGATCATCATCGGTGCGTGATTT
CTCGGAAGTTCGATCGACGCGAAGCCGAAAGGCGTCTCCAGCAAAACGGG
GAAGACTGCAAAGATGATGATGGAAACCTTCTTCGGAATGAGTCTAGTGA
CCGGTTTCAATTCCTAGAAGTTGCTCACATCCTACCTCACTCTCTAACGT
CCGTCGCTTCGGATAACGCTGAACTGATGCCGTCGGGGCACACCCGCCAC
CAGGTCTCTCTGGAGGCTGTTTTGGATTTCTCACAGCCATTCACTCTACC
ACCAGATCAAAGTCGGACAGCAACCATTGTTTTTTATCAACTCATCAATC
ACTACAATACCGAGCAGGTTGCACGCAAAGGGTACAGACCTGCTGCGCTT
GCCCAGGCTGTCTTTGATCACGTTTCATCTAAAGACGCATTTCTAGTTCT
CTTCCTTTCATTTGTACATGATACATTATGCTCGCAATCAAACAATGCGC
AAAGCTCTGACTTCACTCCTTGCCTGCTCTATTTCGATGGTTTCGCCTCA
TGGAATTTAGAGAAGTTGAAGAGCACCAGGGACGCAATTGAAAACTTTGC
TGAGTATATTATTGAAAATCTGCTCCTTCCAC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013114-T1.utr3p1 | KJC3_013114-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_013114-T1.utr5p1 | KJC3_013114-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR003615 |
| DBxref | PFAM:PF13391 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:3586028..3588564 - |
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