You are here

Home

KYF_000087-T1, KYF_000087-T1 (mRNA) Aspergillus niger KYF3

Overview
NameKYF_000087-T1
Unique NameKYF_000087-T1
TypemRNA
OrganismAspergillus niger KYF3
Sequences
The following sequences are available for this feature:

mRNA from alignment at YF10F:760695..761520-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KYF_000087-T1 ID=KYF_000087-T1|Name=KYF_000087-T1|organism=Aspergillus niger KYF3|type=mRNA|length=826bp|location=Sequence derived from alignment at YF10F:760695..761520- (Aspergillus niger KYF3)
ATGGAGGCGCCCTCAACATCTACGACAGACCTTCAGGATGCTAAGACCGG
ACCATGTACCATTGATGGCACAACTACTTCAACGTCCCGCACTTTGCTTG
TTGGAGAGGTACAGTGCAAAGGGACACATGCAAATGCTGGTAAGGTATAT
ACCCTCGGCATCTATAAGACCATATCCACTGATGGAGCACAAAGGAAACT
CGACATACGTTGAAATAGAAGCCCGCTTGATAACCATGGTTAAAGATATG
CTGCAATGTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGCCAAAACCCC
CGAAAGATATGCCAGGGCGATTTTATTCTTTACCAAGGGCTACACTGAGA
ATCCCAAGGATGTTGTTGGCAATGCTATCTTCACAGTCGATAGCCGGGAG
CTTGTGCTGGTCAAAGATATAGAGATATCTAGCCTCTGCGAGCATCATCT
GATGCCATTTGTCGGAAAGGTATGACATAGTTTGTGTGGCTGGGAGCTTC
GATTTACTCATTGTTTTTTAAAGATCCACATAGGTTATATTCCCGATGGC
CGTGTGCTTGGTCTCTCTAAGCTCGCTCGCTTGGCAGAAATTTTTGCTCG
GCGCTTACAACTCCAAGAGAGGCTCACGCAACAGATTGCCAATGCCATTC
AGCAGATTCTTGAACCTCAGGGGGTTGGTGTGATCATGGAAGCAAGCCAC
ATGTGCATGGTCACACGAGGCACTCAAAAATACGCCGCCATGACGACAAC
CTGCTGTATGACCGGCGTATTGCAACGTGACGGCAGGGCCAGGGATAACT
TCTACTTCCTTCTCAATCGGCGATAA
back to top

Coding sequence (CDS) from alignment at YF10F:760695..761520-

>KYF_000087-T1 ID=KYF_000087-T1|Name=KYF_000087-T1|organism=Aspergillus niger KYF3|type=CDS|length=2151bp|location=Sequence derived from alignment at YF10F:760695..761520- (Aspergillus niger KYF3)
ATCCACATAGGTTATATTCCCGATGGCCGTGTGCTTGGTCTCTCTAAGCT
CGCTCGCTTGGCAGAAATTTTTGCTCGGCGCTTACAACTCCAAGAGAGGC
TCACGCAACAGATTGCCAATGCCATTCAGCAGATTCTTGAACCTCAGGGG
GTTGGTGTGATCATGGAAGCAAGCCACATGTGCATGGTCACACGAGGCAC
TCAAAAATACGCCGCCATGACGACAACCTGCTGTATGACCGGCGTATTGC
AACGTGACGGCAGGGCCAGGGATAACTTCTACTTCCTTCTCAATCGGCGA
TAAGAAACTCGACATACGTTGAAATAGAAGCCCGCTTGATAACCATGGTT
AAAGATATGCTGCAATGTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGC
CAAAACCCCCGAAAGATATGCCAGGGCGATTTTATTCTTTACCAAGGGCT
ACACTGAGAATCCCAAGGATGTTGTTGGCAATGCTATCTTCACAGTCGAT
AGCCGGGAGCTTGTGCTGGTCAAAGATATAGAGATATCTAGCCTCTGCGA
GCATCATCTGATGCCATTTGTCGGAAAGATGGAGGCGCCCTCAACATCTA
CGACAGACCTTCAGGATGCTAAGACCGGACCATGTACCATTGATGGCACA
ACTACTTCAACGTCCCGCACTTTGCTTGTTGGAGAGGTACAGTGCAAAGG
GACACATGCAAATGCTGATCCACATAGGTTATATTCCCGATGGCCGTGTG
CTTGGTCTCTCTAAGCTCGCTCGCTTGGCAGAAATTTTTGCTCGGCGCTT
ACAACTCCAAGAGAGGCTCACGCAACAGATTGCCAATGCCATTCAGCAGA
TTCTTGAACCTCAGGGGGTTGGTGTGATCATGGAAGCAAGCCACATGTGC
ATGGTCACACGAGGCACTCAAAAATACGCCGCCATGACGACAACCTGCTG
TATGACCGGCGTATTGCAACGTGACGGCAGGGCCAGGGATAACTTCTACT
TCCTTCTCAATCGGCGATAAGAAACTCGACATACGTTGAAATAGAAGCCC
GCTTGATAACCATGGTTAAAGATATGCTGCAATGTCTCGGAGAAGACCCA
ACCCGTGAAGGCCTCGCCAAAACCCCCGAAAGATATGCCAGGGCGATTTT
ATTCTTTACCAAGGGCTACACTGAGAATCCCAAGGATGTTGTTGGCAATG
CTATCTTCACAGTCGATAGCCGGGAGCTTGTGCTGGTCAAAGATATAGAG
ATATCTAGCCTCTGCGAGCATCATCTGATGCCATTTGTCGGAAAGATGGA
GGCGCCCTCAACATCTACGACAGACCTTCAGGATGCTAAGACCGGACCAT
GTACCATTGATGGCACAACTACTTCAACGTCCCGCACTTTGCTTGTTGGA
GAGGTACAGTGCAAAGGGACACATGCAAATGCTGATCCACATAGGTTATA
TTCCCGATGGCCGTGTGCTTGGTCTCTCTAAGCTCGCTCGCTTGGCAGAA
ATTTTTGCTCGGCGCTTACAACTCCAAGAGAGGCTCACGCAACAGATTGC
CAATGCCATTCAGCAGATTCTTGAACCTCAGGGGGTTGGTGTGATCATGG
AAGCAAGCCACATGTGCATGGTCACACGAGGCACTCAAAAATACGCCGCC
ATGACGACAACCTGCTGTATGACCGGCGTATTGCAACGTGACGGCAGGGC
CAGGGATAACTTCTACTTCCTTCTCAATCGGCGATAAGAAACTCGACATA
CGTTGAAATAGAAGCCCGCTTGATAACCATGGTTAAAGATATGCTGCAAT
GTCTCGGAGAAGACCCAACCCGTGAAGGCCTCGCCAAAACCCCCGAAAGA
TATGCCAGGGCGATTTTATTCTTTACCAAGGGCTACACTGAGAATCCCAA
GGATGTTGTTGGCAATGCTATCTTCACAGTCGATAGCCGGGAGCTTGTGC
TGGTCAAAGATATAGAGATATCTAGCCTCTGCGAGCATCATCTGATGCCA
TTTGTCGGAAAGATGGAGGCGCCCTCAACATCTACGACAGACCTTCAGGA
TGCTAAGACCGGACCATGTACCATTGATGGCACAACTACTTCAACGTCCC
GCACTTTGCTTGTTGGAGAGGTACAGTGCAAAGGGACACATGCAAATGCT
G
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003934GTP cyclohydrolase I activity
Vocabulary: Biological Process
TermDefinition
GO:0046654tetrahydrofolate biosynthetic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KYF_000087KYF_000087Aspergillus niger KYF3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KYF_000087-T1KYF_000087-T1-proteinAspergillus niger KYF3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000087-T1.cdsKYF_000087-T1.cdsAspergillus niger KYF3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KYF_000087-T1.exon3KYF_000087-T1.exon3Aspergillus niger KYF3exon
KYF_000087-T1.exon2KYF_000087-T1.exon2Aspergillus niger KYF3exon
KYF_000087-T1.exon1KYF_000087-T1.exon1Aspergillus niger KYF3exon


Properties
Property NameValue
DBxrefInterPro:IPR018234
DBxrefInterPro:IPR001474
DBxrefInterPro:IPR020602
DBxrefPFAM:PF01227
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KYF32020-10-09
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
YF10FsupercontigYF10F:760695..761520 -
Powered by Drupal