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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:92126..93842+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000175-T1 ID=KYF_000175-T1|Name=KYF_000175-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1717bp|location=Sequence derived from alignment at ch1:92126..93842+ (Aspergillus niger KYF3) ATGGATAGTATGAACAAGTTCTCCACGCCGGCACCATCCCGCCTGGGGTC
GATGAACCGTCGATTCGGCGGCAAACGATCGAGAACGGGATGCCGCACTT
GTCGGTAGGTGCAAGAAAGACCCAAGTGCACACCTGTCGCTACTGACTTG
GAACAGAGCTCGCCGCGTGAAATGTGATGAAACCCCCGGCGCATGCCGGA
GATGTACCTCCGCGGGTCGTGTTTGCGATGGCTACGAGGTGCAAAGACTG
CCCTTGATGAGGGATCCATGGACCAAGATCAGCCCTGAGTTGAGGAGTGG
CTTTCAATGGGTCATTACCTCCGACGAGAGCCGCTGTTTCTCCTACTTTC
AGCACCACACGGTGCCCACCTTCCGCGAAATGTTCGACTCCTCGCTCTGG
CAGCATCTCGTCCTGCAGATAGGTCAGTCGGAGCCAGCGGTGTACCATGC
GACCGTGGCCCTCAGCGCGATCCACCAAGACGCGGAGAGCAGAGGAATGC
CCTTGGCTGCCAACTTCCCCGGAAGGAGTCAGGGCCCCTGGCTGCGCTTT
GCGCAAGAGCAGCTGGGCCGCGCTTTTCAGAGCCTCACCCGGCGCCGTGC
CTCTTCGGATCCCTGGTTGCGCAATGTGACCCTCCTCTGCTGTTTGTTGT
TCGTTCTCTCCGACCTGCTGCAGGGCGACTACGACGATGCCTTTACCCAT
CTCCAGAGTGGCCTGCGCATCCTCTGCGAGCTCCAGGCAGCGCGAGAATT
GGTGGCGCCTACGCCCCGCCAAGAACTGGTGGAACATTGTCTGGTGGCTG
CTTTTGCCCAGCTGGACATGAGTACCGCCCACTATGGCCTCGGGGGGCCT
CTGCTGTGCATCGACTCTTTGCCCACCCAGTGGCAGTCGCAGCCGACATC
AGCGGTCGCCTTTGCCAATCTGGAGGAAGCTCGCACGGCCTTCAACCTGG
TCACCAGTGCTGGGTATCGCTTTATGATCTCGGGTGAGGAAATATTGCTG
GGAGACATCAAGCGCAACTACGCCACCATCCAGTCGACGCAGCTGCGGGT
CCGCTCCCTGGCCTCCCGATTTTGGCGATCCTTCGAGCCCTTCTACCACA
ACTCTTACCATCTTCTCAATCACAAAGAGCAGCGGAGTGTCGAACTGATT
CATCTACAATACCTCGGCCTGATGGTGTCGCTGGAAACAATCCCCCTGGC
GGACAATCCAGCTGCCCTGGCTGCTGTCACGCCTGCCATCGAGAAAGTTG
TTTCCTTGGCCGAGTCAATCATGACCCGGTTCCCTGAGCGTCCCACCATC
AGTATTGATGTGGGTGTCCTTCCGCCATTGTACAATGGGGCCTTGGTGTG
TCAGGACTATCGCGTTCGGTGGCGGGCCATTAAGCTGCTGCGTGCTTGGC
CGCATCGAGAGGGGCCATTTGACTCCAATTGGATCCTCGCCCTGGCGGAG
GAGGCACTGCGTCTGGACTTGCTGGCCGATCCCGCCGTCAGCCTGGATCG
AGATACCGCGCCTAGTCCATCCGATGACGATGAATTTGCACCTGGTCGCA
TGCTGCAAGACCTCAACGATCGACGGTCGCGGATTAAGCAATCATTGGCA
AAGACGAGAGAGGGGTTGGATGATGGAGGTTCTCCGGCAGATTATCTGGG
CGCAGTCAAATGTGTGTCTGGGTGGTCATGTATGCGCGCTTTTAGGGCGA
GGTTTCCAGACTGCTGA back to topCoding sequence (CDS) from alignment at ch1:92126..93842+ >KYF_000175-T1 ID=KYF_000175-T1|Name=KYF_000175-T1|organism=Aspergillus niger KYF3|type=CDS|length=3330bp|location=Sequence derived from alignment at ch1:92126..93842+ (Aspergillus niger KYF3) ATGGATAGTATGAACAAGTTCTCCACGCCGGCACCATCCCGCCTGGGGTC GATGAACCGTCGATTCGGCGGCAAACGATCGAGAACGGGATGCCGCACTT GTCGAGCTCGCCGCGTGAAATGTGATGAAACCCCCGGCGCATGCCGGAGA TGTACCTCCGCGGGTCGTGTTTGCGATGGCTACGAGGTGCAAAGACTGCC CTTGATGAGGGATCCATGGACCAAGATCAGCCCTGAGTTGAGGAGTGGCT TTCAATGGGTCATTACCTCCGACGAGAGCCGCTGTTTCTCCTACTTTCAG CACCACACGGTGCCCACCTTCCGCGAAATGTTCGACTCCTCGCTCTGGCA GCATCTCGTCCTGCAGATAGGTCAGTCGGAGCCAGCGGTGTACCATGCGA CCGTGGCCCTCAGCGCGATCCACCAAGACGCGGAGAGCAGAGGAATGCCC TTGGCTGCCAACTTCCCCGGAAGGAGTCAGGGCCCCTGGCTGCGCTTTGC GCAAGAGCAGCTGGGCCGCGCTTTTCAGAGCCTCACCCGGCGCCGTGCCT CTTCGGATCCCTGGTTGCGCAATGTGACCCTCCTCTGCTGTTTGTTGTTC GTTCTCTCCGACCTGCTGCAGGGCGACTACGACGATGCCTTTACCCATCT CCAGAGTGGCCTGCGCATCCTCTGCGAGCTCCAGGCAGCGCGAGAATTGG TGGCGCCTACGCCCCGCCAAGAACTGGTGGAACATTGTCTGGTGGCTGCT TTTGCCCAGCTGGACATGAGTACCGCCCACTATGGCCTCGGGGGGCCTCT GCTGTGCATCGACTCTTTGCCCACCCAGTGGCAGTCGCAGCCGACATCAG CGGTCGCCTTTGCCAATCTGGAGGAAGCTCGCACGGCCTTCAACCTGGTC ACCAGTGCTGGGTATCGCTTTATGATCTCGGGTGAGGAAATATTGCTGGG AGACATCAAGCGCAACTACGCCACCATCCAGTCGACGCAGCTGCGGGTCC GCTCCCTGGCCTCCCGATTTTGGCGATCCTTCGAGCCCTTCTACCACAAC TCTTACCATCTTCTCAATCACAAAGAGCAGCGGAGTGTCGAACTGATTCA TCTACAATACCTCGGCCTGATGGTGTCGCTGGAAACAATCCCCCTGGCGG ACAATCCAGCTGCCCTGGCTGCTGTCACGCCTGCCATCGAGAAAGTTGTT TCCTTGGCCGAGTCAATCATGACCCGGTTCCCTGAGCGTCCCACCATCAG TATTGATGTGGGTGTCCTTCCGCCATTGTACAATGGGGCCTTGGTGTGTC AGGACTATCGCGTTCGGTGGCGGGCCATTAAGCTGCTGCGTGCTTGGCCG CATCGAGAGGGGCCATTTGACTCCAATTGGATCCTCGCCCTGGCGGAGGA GGCACTGCGTCTGGACTTGCTGGCCGATCCCGCCGTCAGCCTGGATCGAG ATACCGCGCCTAGTCCATCCGATGACGATGAATTTGCACCTGGTCGCATG CTGCAAGACCTCAACGATCGACGGTCGCGGATTAAGCAATCATTGGCAAA GACGAGAGAGGGGTTGGATGATGGAGGTTCTCCGGCAGATTATCTGGGCG CAGTCAAATGTGTGTCTGGGTGGTCATGTATGCGCGCTTTTAGGGCGAGG TTTCCAGACTGCTGAATGGATAGTATGAACAAGTTCTCCACGCCGGCACC ATCCCGCCTGGGGTCGATGAACCGTCGATTCGGCGGCAAACGATCGAGAA CGGGATGCCGCACTTGTCGAGCTCGCCGCGTGAAATGTGATGAAACCCCC GGCGCATGCCGGAGATGTACCTCCGCGGGTCGTGTTTGCGATGGCTACGA GGTGCAAAGACTGCCCTTGATGAGGGATCCATGGACCAAGATCAGCCCTG AGTTGAGGAGTGGCTTTCAATGGGTCATTACCTCCGACGAGAGCCGCTGT TTCTCCTACTTTCAGCACCACACGGTGCCCACCTTCCGCGAAATGTTCGA CTCCTCGCTCTGGCAGCATCTCGTCCTGCAGATAGGTCAGTCGGAGCCAG CGGTGTACCATGCGACCGTGGCCCTCAGCGCGATCCACCAAGACGCGGAG AGCAGAGGAATGCCCTTGGCTGCCAACTTCCCCGGAAGGAGTCAGGGCCC CTGGCTGCGCTTTGCGCAAGAGCAGCTGGGCCGCGCTTTTCAGAGCCTCA CCCGGCGCCGTGCCTCTTCGGATCCCTGGTTGCGCAATGTGACCCTCCTC TGCTGTTTGTTGTTCGTTCTCTCCGACCTGCTGCAGGGCGACTACGACGA TGCCTTTACCCATCTCCAGAGTGGCCTGCGCATCCTCTGCGAGCTCCAGG CAGCGCGAGAATTGGTGGCGCCTACGCCCCGCCAAGAACTGGTGGAACAT TGTCTGGTGGCTGCTTTTGCCCAGCTGGACATGAGTACCGCCCACTATGG CCTCGGGGGGCCTCTGCTGTGCATCGACTCTTTGCCCACCCAGTGGCAGT CGCAGCCGACATCAGCGGTCGCCTTTGCCAATCTGGAGGAAGCTCGCACG GCCTTCAACCTGGTCACCAGTGCTGGGTATCGCTTTATGATCTCGGGTGA GGAAATATTGCTGGGAGACATCAAGCGCAACTACGCCACCATCCAGTCGA CGCAGCTGCGGGTCCGCTCCCTGGCCTCCCGATTTTGGCGATCCTTCGAG CCCTTCTACCACAACTCTTACCATCTTCTCAATCACAAAGAGCAGCGGAG TGTCGAACTGATTCATCTACAATACCTCGGCCTGATGGTGTCGCTGGAAA CAATCCCCCTGGCGGACAATCCAGCTGCCCTGGCTGCTGTCACGCCTGCC ATCGAGAAAGTTGTTTCCTTGGCCGAGTCAATCATGACCCGGTTCCCTGA GCGTCCCACCATCAGTATTGATGTGGGTGTCCTTCCGCCATTGTACAATG GGGCCTTGGTGTGTCAGGACTATCGCGTTCGGTGGCGGGCCATTAAGCTG CTGCGTGCTTGGCCGCATCGAGAGGGGCCATTTGACTCCAATTGGATCCT CGCCCTGGCGGAGGAGGCACTGCGTCTGGACTTGCTGGCCGATCCCGCCG TCAGCCTGGATCGAGATACCGCGCCTAGTCCATCCGATGACGATGAATTT GCACCTGGTCGCATGCTGCAAGACCTCAACGATCGACGGTCGCGGATTAA GCAATCATTGGCAAAGACGAGAGAGGGGTTGGATGATGGAGGTTCTCCGG CAGATTATCTGGGCGCAGTCAAATGTGTGTCTGGGTGGTCATGTATGCGC GCTTTTAGGGCGAGGTTTCCAGACTGCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0005634 | nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0008270 | zinc ion binding |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_1.1 |
Note | EggNog:ENOG41 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR021858 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch1 | supercontig | ch1:92126..93842 + |
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