|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:237805..239916+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000229-T1 ID=KYF_000229-T1|Name=KYF_000229-T1|organism=Aspergillus niger KYF3|type=mRNA|length=2112bp|location=Sequence derived from alignment at ch1:237805..239916+ (Aspergillus niger KYF3)
ATGGCCGATGTTACGCAGGGGACCTCGCGTGGCGTTCGGAAACCTCGCAA
ATCCCGCGGCCGTGGATTGCGGGCCACCACTGGCTGGTCAGTGACCAATC
CTCCGGATTTCTTTTAGTGCTAGTATTCCTTCTGCTGGACGGACCTGCTG
ACTGCCACAGCCTGATTTGCAAGCGTCGCCATGTCAAGTGTGATGAGGTA
CGGCAACTTAGCGAAACGTTCTTTCGCAAAAAATATTTCCTGCTGACTCG
GACGCAGGCTCGCCCACAATGCGGCCCTTGCGCCAAAGGCCAACGCGACT
GTGTTTATGGGAGCAGCTATGAATCTGGAACTCCTAGTATAGGGGCTAAA
CAAACAACCATCCCAGTGCACTCCTCTCCTTCATCACAATTGACTCCACA
GGTGCAGCTACACGAGCCCCTGCAAGTCTTGGTAGATGTCTGCCAACATG
AAGACGCTTCCACTCACCGAGCGTCGGCTACGGCATCTCCAAGGGGCCAA
CACAGCAGTGTGCCGCCTCAGATTAGTCTACATCAACACAGCCATGTCTC
TCCTTCGGCCTCAATCCACGACTTCGCACCATCTCCGGCTACAGATTCCT
CGGTATCGACGAGAATTGCTCCTTTGAGTTGGTTCGAGCTTCTGGCCAAC
GATGCTGTCAATGCGGACCGGAATTTTTTCCTATCATCACCGCATCGAGA
CGTGAATCCTGCTTGCCAGGGATCAACAACCCATCTATCGGTCGCAAACC
TGCGACCTCACAATGTTAGGGAATGTCAAAGCTTTCAAGCCGCTTCTTTT
GAACGTGATCCGGATATCGAGAAGAGAATATCGCCTGCAGCTGATGGCCA
TCCAAAGCTTCCCGATGCTCCGTCCTCTTGGTGTACTGCCGCGCCCATTC
AGTTATCGGAACAAGAACACCTCATGTTCAAACACTTTGTACGGAACATG
TCTAGTTGGTATGATTTCTTTGACCCAACGCAACAGATTTCGAGTAAGGT
TCCACAATTGGCAATGAGAAACATAGGTGTAATGAAGGCCCTTCTGGCCC
TCTCGGCACGCCATCTTTCCATCTGGCATACCTACAAAGGCTCAGGGCTT
GTTCCATCCCGGGAAGATGGAAGAAGAATGATGGATTTCCCAGATGTCGA
TCGCAACATTGCAGTCCAGTATTACTACGAGACCCTGCAGTACCTCAACA
AGGCTATGCAGTATCCCAGCTACGCATACAGCCACGAGATCATTACCACG
TCACTCCTGATCAGCACATACGAAATGGTGGATGGATCCAATCGCGACTG
GGAGCGGCATCTGAAAGGGGTATTCTGGATTCAAAGGTACCAAAACAACG
ATGGAGAATGTGGGGGGTTGCGTCAAGCCATCTGGTGGGCATGGCTGCGG
CAGGATGTCTGGGTAGCAATGCGGGAGCGACGTCGAGTCTTCAGCTTCTG
GAAGCCCAAGCGACACATCTCCTCGCTGTCCCCGACGGAGCTGGCCGGCT
TCGTTTCATACATCCTTGGACAATGCGTCAACTATGCCTCGCGTGAAGAG
GCAGCATCTAAAGACATACAGAGTCGATTGGAGAGGGGCAATGAGCTCCT
CTACATGCTGCAGGAATGGCAGGATTATTTGCCACCGGAGTTCAACCCAC
TCCCTTGTGAGCAGGACGCGACCGTCTTTCCACCGATCTGGGTCCATCCG
CCCCCATATGCAGCGGCATTGCAAATACAAAGCTTAGCTAGAATTCTGGT
ATTATCACACCGTCCGACTGTGAACGGGTTCCAAGATTACCGTGCTGCTC
AAAAGCTGCTTACTACGTCAGTGAACACAATATGTGGCATTGCTCGAACT
ATAAGCGAGGACAACGTCGCTGCCAGCCTCATGTCACTGTATTGTATATA
TGGGGGTAAGAAGGGTCTTTTGTTGTCGTGGTATGATTCTTTGCTGACCC
TTTTCTGCAGCTGGGATGAGCGTTCATACCCCTCACGAGCGGGCAGCATT
GCTCGAATTAATCGATATTTTCGAGAGCAGAGTCTGTTGGCCTAGATATT
CATTACGCAACGACCTCGAATCAGAATACCGTAAGGATGGCCTTTCTGGT
TTCACGACCTAG back to topCoding sequence (CDS) from alignment at ch1:237805..239916+ >KYF_000229-T1 ID=KYF_000229-T1|Name=KYF_000229-T1|organism=Aspergillus niger KYF3|type=CDS|length=7692bp|location=Sequence derived from alignment at ch1:237805..239916+ (Aspergillus niger KYF3)
ATGGCCGATGTTACGCAGGGGACCTCGCGTGGCGTTCGGAAACCTCGCAA
ATCCCGCGGCCGTGGATTGCGGGCCACCACTGGCTGCCTGATTTGCAAGC
GTCGCCATGTCAAGTGTGATGAGGCTCGCCCACAATGCGGCCCTTGCGCC
AAAGGCCAACGCGACTGTGTTTATGGGAGCAGCTATGAATCTGGAACTCC
TAGTATAGGGGCTAAACAAACAACCATCCCAGTGCACTCCTCTCCTTCAT
CACAATTGACTCCACAGGTGCAGCTACACGAGCCCCTGCAAGTCTTGGTA
GATGTCTGCCAACATGAAGACGCTTCCACTCACCGAGCGTCGGCTACGGC
ATCTCCAAGGGGCCAACACAGCAGTGTGCCGCCTCAGATTAGTCTACATC
AACACAGCCATGTCTCTCCTTCGGCCTCAATCCACGACTTCGCACCATCT
CCGGCTACAGATTCCTCGGTATCGACGAGAATTGCTCCTTTGAGTTGGTT
CGAGCTTCTGGCCAACGATGCTGTCAATGCGGACCGGAATTTTTTCCTAT
CATCACCGCATCGAGACGTGAATCCTGCTTGCCAGGGATCAACAACCCAT
CTATCGGTCGCAAACCTGCGACCTCACAATGTTAGGGAATGTCAAAGCTT
TCAAGCCGCTTCTTTTGAACGTGATCCGGATATCGAGAAGAGAATATCGC
CTGCAGCTGATGGCCATCCAAAGCTTCCCGATGCTCCGTCCTCTTGGTGT
ACTGCCGCGCCCATTCAGTTATCGGAACAAGAACACCTCATGTTCAAACA
CTTTGTACGGAACATGTCTAGTTGGTATGATTTCTTTGACCCAACGCAAC
AGATTTCGAGTAAGGTTCCACAATTGGCAATGAGAAACATAGGTGTAATG
AAGGCCCTTCTGGCCCTCTCGGCACGCCATCTTTCCATCTGGCATACCTA
CAAAGGCTCAGGGCTTGTTCCATCCCGGGAAGATGGAAGAAGAATGATGG
ATTTCCCAGATGTCGATCGCAACATTGCAGTCCAGTATTACTACGAGACC
CTGCAGTACCTCAACAAGGCTATGCAGTATCCCAGCTACGCATACAGCCA
CGAGATCATTACCACGTCACTCCTGATCAGCACATACGAAATGGTGGATG
GATCCAATCGCGACTGGGAGCGGCATCTGAAAGGGGTATTCTGGATTCAA
AGGTACCAAAACAACGATGGAGAATGTGGGGGGTTGCGTCAAGCCATCTG
GTGGGCATGGCTGCGGCAGGATGTCTGGGTAGCAATGCGGGAGCGACGTC
GAGTCTTCAGCTTCTGGAAGCCCAAGCGACACATCTCCTCGCTGTCCCCG
ACGGAGCTGGCCGGCTTCGTTTCATACATCCTTGGACAATGCGTCAACTA
TGCCTCGCGTGAAGAGGCAGCATCTAAAGACATACAGAGTCGATTGGAGA
GGGGCAATGAGCTCCTCTACATGCTGCAGGAATGGCAGGATTATTTGCCA
CCGGAGTTCAACCCACTCCCTTGTGAGCAGGACGCGACCGTCTTTCCACC
GATCTGGGTCCATCCGCCCCCATATGCAGCGGCATTGCAAATACAAAGCT
TAGCTAGAATTCTGGTATTATCACACCGTCCGACTGTGAACGGGTTCCAA
GATTACCGTGCTGCTCAAAAGCTGCTTACTACGTCAGTGAACACAATATG
TGGCATTGCTCGAACTATAAGCGAGGACAACGTCGCTGCCAGCCTCATGT
CACTGTATTGTATATATGGGGCTGGGATGAGCGTTCATACCCCTCACGAG
CGGGCAGCATTGCTCGAATTAATCGATATTTTCGAGAGCAGAGTCTGTTG
GCCTAGATATTCATTACGCAACGACCTCGAATCAGAATACCGTAAGGATG
GCCTTTCTGGTTTCACGACCTAGATGGCCGATGTTACGCAGGGGACCTCG
CGTGGCGTTCGGAAACCTCGCAAATCCCGCGGCCGTGGATTGCGGGCCAC
CACTGGCTGCCTGATTTGCAAGCGTCGCCATGTCAAGTGTGATGAGGCTC
GCCCACAATGCGGCCCTTGCGCCAAAGGCCAACGCGACTGTGTTTATGGG
AGCAGCTATGAATCTGGAACTCCTAGTATAGGGGCTAAACAAACAACCAT
CCCAGTGCACTCCTCTCCTTCATCACAATTGACTCCACAGGTGCAGCTAC
ACGAGCCCCTGCAAGTCTTGGTAGATGTCTGCCAACATGAAGACGCTTCC
ACTCACCGAGCGTCGGCTACGGCATCTCCAAGGGGCCAACACAGCAGTGT
GCCGCCTCAGATTAGTCTACATCAACACAGCCATGTCTCTCCTTCGGCCT
CAATCCACGACTTCGCACCATCTCCGGCTACAGATTCCTCGGTATCGACG
AGAATTGCTCCTTTGAGTTGGTTCGAGCTTCTGGCCAACGATGCTGTCAA
TGCGGACCGGAATTTTTTCCTATCATCACCGCATCGAGACGTGAATCCTG
CTTGCCAGGGATCAACAACCCATCTATCGGTCGCAAACCTGCGACCTCAC
AATGTTAGGGAATGTCAAAGCTTTCAAGCCGCTTCTTTTGAACGTGATCC
GGATATCGAGAAGAGAATATCGCCTGCAGCTGATGGCCATCCAAAGCTTC
CCGATGCTCCGTCCTCTTGGTGTACTGCCGCGCCCATTCAGTTATCGGAA
CAAGAACACCTCATGTTCAAACACTTTGTACGGAACATGTCTAGTTGGTA
TGATTTCTTTGACCCAACGCAACAGATTTCGAGTAAGGTTCCACAATTGG
CAATGAGAAACATAGGTGTAATGAAGGCCCTTCTGGCCCTCTCGGCACGC
CATCTTTCCATCTGGCATACCTACAAAGGCTCAGGGCTTGTTCCATCCCG
GGAAGATGGAAGAAGAATGATGGATTTCCCAGATGTCGATCGCAACATTG
CAGTCCAGTATTACTACGAGACCCTGCAGTACCTCAACAAGGCTATGCAG
TATCCCAGCTACGCATACAGCCACGAGATCATTACCACGTCACTCCTGAT
CAGCACATACGAAATGGTGGATGGATCCAATCGCGACTGGGAGCGGCATC
TGAAAGGGGTATTCTGGATTCAAAGGTACCAAAACAACGATGGAGAATGT
GGGGGGTTGCGTCAAGCCATCTGGTGGGCATGGCTGCGGCAGGATGTCTG
GGTAGCAATGCGGGAGCGACGTCGAGTCTTCAGCTTCTGGAAGCCCAAGC
GACACATCTCCTCGCTGTCCCCGACGGAGCTGGCCGGCTTCGTTTCATAC
ATCCTTGGACAATGCGTCAACTATGCCTCGCGTGAAGAGGCAGCATCTAA
AGACATACAGAGTCGATTGGAGAGGGGCAATGAGCTCCTCTACATGCTGC
AGGAATGGCAGGATTATTTGCCACCGGAGTTCAACCCACTCCCTTGTGAG
CAGGACGCGACCGTCTTTCCACCGATCTGGGTCCATCCGCCCCCATATGC
AGCGGCATTGCAAATACAAAGCTTAGCTAGAATTCTGGTATTATCACACC
GTCCGACTGTGAACGGGTTCCAAGATTACCGTGCTGCTCAAAAGCTGCTT
ACTACGTCAGTGAACACAATATGTGGCATTGCTCGAACTATAAGCGAGGA
CAACGTCGCTGCCAGCCTCATGTCACTGTATTGTATATATGGGGCTGGGA
TGAGCGTTCATACCCCTCACGAGCGGGCAGCATTGCTCGAATTAATCGAT
ATTTTCGAGAGCAGAGTCTGTTGGCCTAGATATTCATTACGCAACGACCT
CGAATCAGAATACCGTAAGGATGGCCTTTCTGGTTTCACGACCTAGATGG
CCGATGTTACGCAGGGGACCTCGCGTGGCGTTCGGAAACCTCGCAAATCC
CGCGGCCGTGGATTGCGGGCCACCACTGGCTGCCTGATTTGCAAGCGTCG
CCATGTCAAGTGTGATGAGGCTCGCCCACAATGCGGCCCTTGCGCCAAAG
GCCAACGCGACTGTGTTTATGGGAGCAGCTATGAATCTGGAACTCCTAGT
ATAGGGGCTAAACAAACAACCATCCCAGTGCACTCCTCTCCTTCATCACA
ATTGACTCCACAGGTGCAGCTACACGAGCCCCTGCAAGTCTTGGTAGATG
TCTGCCAACATGAAGACGCTTCCACTCACCGAGCGTCGGCTACGGCATCT
CCAAGGGGCCAACACAGCAGTGTGCCGCCTCAGATTAGTCTACATCAACA
CAGCCATGTCTCTCCTTCGGCCTCAATCCACGACTTCGCACCATCTCCGG
CTACAGATTCCTCGGTATCGACGAGAATTGCTCCTTTGAGTTGGTTCGAG
CTTCTGGCCAACGATGCTGTCAATGCGGACCGGAATTTTTTCCTATCATC
ACCGCATCGAGACGTGAATCCTGCTTGCCAGGGATCAACAACCCATCTAT
CGGTCGCAAACCTGCGACCTCACAATGTTAGGGAATGTCAAAGCTTTCAA
GCCGCTTCTTTTGAACGTGATCCGGATATCGAGAAGAGAATATCGCCTGC
AGCTGATGGCCATCCAAAGCTTCCCGATGCTCCGTCCTCTTGGTGTACTG
CCGCGCCCATTCAGTTATCGGAACAAGAACACCTCATGTTCAAACACTTT
GTACGGAACATGTCTAGTTGGTATGATTTCTTTGACCCAACGCAACAGAT
TTCGAGTAAGGTTCCACAATTGGCAATGAGAAACATAGGTGTAATGAAGG
CCCTTCTGGCCCTCTCGGCACGCCATCTTTCCATCTGGCATACCTACAAA
GGCTCAGGGCTTGTTCCATCCCGGGAAGATGGAAGAAGAATGATGGATTT
CCCAGATGTCGATCGCAACATTGCAGTCCAGTATTACTACGAGACCCTGC
AGTACCTCAACAAGGCTATGCAGTATCCCAGCTACGCATACAGCCACGAG
ATCATTACCACGTCACTCCTGATCAGCACATACGAAATGGTGGATGGATC
CAATCGCGACTGGGAGCGGCATCTGAAAGGGGTATTCTGGATTCAAAGGT
ACCAAAACAACGATGGAGAATGTGGGGGGTTGCGTCAAGCCATCTGGTGG
GCATGGCTGCGGCAGGATGTCTGGGTAGCAATGCGGGAGCGACGTCGAGT
CTTCAGCTTCTGGAAGCCCAAGCGACACATCTCCTCGCTGTCCCCGACGG
AGCTGGCCGGCTTCGTTTCATACATCCTTGGACAATGCGTCAACTATGCC
TCGCGTGAAGAGGCAGCATCTAAAGACATACAGAGTCGATTGGAGAGGGG
CAATGAGCTCCTCTACATGCTGCAGGAATGGCAGGATTATTTGCCACCGG
AGTTCAACCCACTCCCTTGTGAGCAGGACGCGACCGTCTTTCCACCGATC
TGGGTCCATCCGCCCCCATATGCAGCGGCATTGCAAATACAAAGCTTAGC
TAGAATTCTGGTATTATCACACCGTCCGACTGTGAACGGGTTCCAAGATT
ACCGTGCTGCTCAAAAGCTGCTTACTACGTCAGTGAACACAATATGTGGC
ATTGCTCGAACTATAAGCGAGGACAACGTCGCTGCCAGCCTCATGTCACT
GTATTGTATATATGGGGCTGGGATGAGCGTTCATACCCCTCACGAGCGGG
CAGCATTGCTCGAATTAATCGATATTTTCGAGAGCAGAGTCTGTTGGCCT
AGATATTCATTACGCAACGACCTCGAATCAGAATACCGTAAGGATGGCCT
TTCTGGTTTCACGACCTAGATGGCCGATGTTACGCAGGGGACCTCGCGTG
GCGTTCGGAAACCTCGCAAATCCCGCGGCCGTGGATTGCGGGCCACCACT
GGCTGCCTGATTTGCAAGCGTCGCCATGTCAAGTGTGATGAGGCTCGCCC
ACAATGCGGCCCTTGCGCCAAAGGCCAACGCGACTGTGTTTATGGGAGCA
GCTATGAATCTGGAACTCCTAGTATAGGGGCTAAACAAACAACCATCCCA
GTGCACTCCTCTCCTTCATCACAATTGACTCCACAGGTGCAGCTACACGA
GCCCCTGCAAGTCTTGGTAGATGTCTGCCAACATGAAGACGCTTCCACTC
ACCGAGCGTCGGCTACGGCATCTCCAAGGGGCCAACACAGCAGTGTGCCG
CCTCAGATTAGTCTACATCAACACAGCCATGTCTCTCCTTCGGCCTCAAT
CCACGACTTCGCACCATCTCCGGCTACAGATTCCTCGGTATCGACGAGAA
TTGCTCCTTTGAGTTGGTTCGAGCTTCTGGCCAACGATGCTGTCAATGCG
GACCGGAATTTTTTCCTATCATCACCGCATCGAGACGTGAATCCTGCTTG
CCAGGGATCAACAACCCATCTATCGGTCGCAAACCTGCGACCTCACAATG
TTAGGGAATGTCAAAGCTTTCAAGCCGCTTCTTTTGAACGTGATCCGGAT
ATCGAGAAGAGAATATCGCCTGCAGCTGATGGCCATCCAAAGCTTCCCGA
TGCTCCGTCCTCTTGGTGTACTGCCGCGCCCATTCAGTTATCGGAACAAG
AACACCTCATGTTCAAACACTTTGTACGGAACATGTCTAGTTGGTATGAT
TTCTTTGACCCAACGCAACAGATTTCGAGTAAGGTTCCACAATTGGCAAT
GAGAAACATAGGTGTAATGAAGGCCCTTCTGGCCCTCTCGGCACGCCATC
TTTCCATCTGGCATACCTACAAAGGCTCAGGGCTTGTTCCATCCCGGGAA
GATGGAAGAAGAATGATGGATTTCCCAGATGTCGATCGCAACATTGCAGT
CCAGTATTACTACGAGACCCTGCAGTACCTCAACAAGGCTATGCAGTATC
CCAGCTACGCATACAGCCACGAGATCATTACCACGTCACTCCTGATCAGC
ACATACGAAATGGTGGATGGATCCAATCGCGACTGGGAGCGGCATCTGAA
AGGGGTATTCTGGATTCAAAGGTACCAAAACAACGATGGAGAATGTGGGG
GGTTGCGTCAAGCCATCTGGTGGGCATGGCTGCGGCAGGATGTCTGGGTA
GCAATGCGGGAGCGACGTCGAGTCTTCAGCTTCTGGAAGCCCAAGCGACA
CATCTCCTCGCTGTCCCCGACGGAGCTGGCCGGCTTCGTTTCATACATCC
TTGGACAATGCGTCAACTATGCCTCGCGTGAAGAGGCAGCATCTAAAGAC
ATACAGAGTCGATTGGAGAGGGGCAATGAGCTCCTCTACATGCTGCAGGA
ATGGCAGGATTATTTGCCACCGGAGTTCAACCCACTCCCTTGTGAGCAGG
ACGCGACCGTCTTTCCACCGATCTGGGTCCATCCGCCCCCATATGCAGCG
GCATTGCAAATACAAAGCTTAGCTAGAATTCTGGTATTATCACACCGTCC
GACTGTGAACGGGTTCCAAGATTACCGTGCTGCTCAAAAGCTGCTTACTA
CGTCAGTGAACACAATATGTGGCATTGCTCGAACTATAAGCGAGGACAAC
GTCGCTGCCAGCCTCATGTCACTGTATTGTATATATGGGGCTGGGATGAG
CGTTCATACCCCTCACGAGCGGGCAGCATTGCTCGAATTAATCGATATTT
TCGAGAGCAGAGTCTGTTGGCCTAGATATTCATTACGCAACGACCTCGAA
TCAGAATACCGTAAGGATGGCCTTTCTGGTTTCACGACCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:237805..239916 + |
|
