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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:393847..395538- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KYF_000284-T1 ID=KYF_000284-T1|Name=KYF_000284-T1|organism=Aspergillus niger KYF3|type=mRNA|length=1692bp|location=Sequence derived from alignment at ch1:393847..395538- (Aspergillus niger KYF3)
ATGTCAGACTCCCGAACCACAACCACCAAAAACAACACTACAAACCACAA
GACCTCGCGCCAGGGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGA
AGCTACGGTGCGACCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGT
GTTTATTGTGTCACCAACCTTGCACGCCCGGCGCGTGGTCCAAAGAAGGG
TCATCTAAAGGCCTTGAAGGGCCGCATCGGTAGGGCCTTGAATTTCCTTC
CTGAGGATTGAGCTTGTTGCTGATTATGTGTCCTGGGAACAGCCACCCTC
GAGCGGTGTCTTCTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTC
GGACGATGAGCTGCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCC
AGTCCCCGGACCCCTCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTG
TATGCTTTATCTTCCCTTCCATTACGAGATTGAAGTCATCAGACTCACCG
GCTCAGGGACCAGGTGTTTTTCGAGCGCGTCCAGCCGATGGTCCCCATAT
TGCAACGCCATCGATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGCA
AACCGACGGGGGCTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGAG
TAGCCAGTTGCCCGAGGTACGCGTAGCACTGTATCGGACCACGCGCCACA
CACTGGAGTCCCTCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTTC
GAGCAGGTGCAAGCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGGT
CTCATACTCTCGCGGCTGGATGAGCGCCGGTCGTGTATTCCGACTAGTGC
AGCTGCTGCGCCTGCCGGAGATAGACGCTTCGCCTCTTTCGCTGCTCGAC
CTGGACCTAGACCCAGATTCTAAATGGGTGGTGGCCGAGGAGAAACGACG
CACCGTGTGGATGGCCTACATAATGGACTGTTCCCTAAATTTACGCCATA
AGGGCTCTCTCACCCTGACCGAGCAAGCGCTGACCCGACTCCCCATGCCC
GAGAGTGAATTCCAATGTGGTCACCCTATTTCAATGGGCTTTTTGGCCGA
AGCACTCGCGGGTACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAAT
GTATCCTGCTAGCCACTATCAGTGGCCGCACTCTGTCACACCGCCATCTA
TCCATGGCTGAGCTCCTCCGAGGAAATCCGCTTCAGGATGTCTGGACTCG
CCATCAGTGGATCGACACGACGCTCACAGCCCACCTGCAGCTAAGCTTTT
CGCTTCCCACGGCCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAAG
ATGATCGGGCAAGCGGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCAC
GCCCTGGGAGCCCGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGCG
CGCTCCAGGCGGCCCGCGAGACTGTCGTTCTAGCACGTAATCTACGCCAT
TTCAGCTGCTTCAAGGTGCATCCCTTCACTCCTATTCTACTAGGCCTATG
TGCAGAGGTATTGCAGCACCCTGTTGCCCATAATGATACCCCAAAGCTGT
TAGGGGAGGTGCAGGACGCCTTGAAATATTTGATGACTGTGAATCGATTG
GCTCGACAGGAAGCAGCAGCTCAGGACATCCGCCGGTCATGA back to topCoding sequence (CDS) from alignment at ch1:393847..395538- >KYF_000284-T1 ID=KYF_000284-T1|Name=KYF_000284-T1|organism=Aspergillus niger KYF3|type=CDS|length=4716bp|location=Sequence derived from alignment at ch1:393847..395538- (Aspergillus niger KYF3)
GGACCAGGTGTTTTTCGAGCGCGTCCAGCCGATGGTCCCCATATTGCAAC
GCCATCGATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGCAAACCGA
CGGGGGCTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGAGTAGCCA
GTTGCCCGAGGTACGCGTAGCACTGTATCGGACCACGCGCCACACACTGG
AGTCCCTCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTTCGAGCAG
GTGCAAGCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGGTCTCATA
CTCTCGCGGCTGGATGAGCGCCGGTCGTGTATTCCGACTAGTGCAGCTGC
TGCGCCTGCCGGAGATAGACGCTTCGCCTCTTTCGCTGCTCGACCTGGAC
CTAGACCCAGATTCTAAATGGGTGGTGGCCGAGGAGAAACGACGCACCGT
GTGGATGGCCTACATAATGGACTGTTCCCTAAATTTACGCCATAAGGGCT
CTCTCACCCTGACCGAGCAAGCGCTGACCCGACTCCCCATGCCCGAGAGT
GAATTCCAATGTGGTCACCCTATTTCAATGGGCTTTTTGGCCGAAGCACT
CGCGGGTACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAATGTATCC
TGCTAGCCACTATCAGTGGCCGCACTCTGTCACACCGCCATCTATCCATG
GCTGAGCTCCTCCGAGGAAATCCGCTTCAGGATGTCTGGACTCGCCATCA
GTGGATCGACACGACGCTCACAGCCCACCTGCAGCTAAGCTTTTCGCTTC
CCACGGCCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAAGATGATC
GGGCAAGCGGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCACGCCCTG
GGAGCCCGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGCGCGCTCC
AGGCGGCCCGCGAGACTGTCGTTCTAGCACGTAATCTACGCCATTTCAGC
TGCTTCAAGGTGCATCCCTTCACTCCTATTCTACTAGGCCTATGTGCAGA
GGTATTGCAGCACCCTGTTGCCCATAATGATACCCCAAAGCTGTTAGGGG
AGGTGCAGGACGCCTTGAAATATTTGATGACTGTGAATCGATTGGCTCGA
CAGGAAGCAGCAGCTCAGGACATCCGCCGGTCATGACCACCCTCGAGCGG
TGTCTTCTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTCGGACGA
TGAGCTGCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCCAGTCCC
CGGACCCCTCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTATGTCAG
ACTCCCGAACCACAACCACCAAAAACAACACTACAAACCACAAGACCTCG
CGCCAGGGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGAAGCTACG
GTGCGACCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGTGTTTATT
GTGTCACCAACCTTGCACGCCCGGCGCGTGGTCCAAAGAAGGGTCATCTA
AAGGCCTTGAAGGGCCGCATCGGGACCAGGTGTTTTTCGAGCGCGTCCAG
CCGATGGTCCCCATATTGCAACGCCATCGATACTTTTCCTGGGCACGGGA
ACCTCAGCAATCGGCAAACCGACGGGGGCTGCAGCAGGCTATTCGCACGC
TGGCCGCTGGCGTGAGTAGCCAGTTGCCCGAGGTACGCGTAGCACTGTAT
CGGACCACGCGCCACACACTGGAGTCCCTCGAGTCGGACGACACTTTGTT
GACAGCCCCGGATTTCGAGCAGGTGCAAGCGTGGATCCTCATCGCCATTT
ACGAGTTTATGCAGGTCTCATACTCTCGCGGCTGGATGAGCGCCGGTCGT
GTATTCCGACTAGTGCAGCTGCTGCGCCTGCCGGAGATAGACGCTTCGCC
TCTTTCGCTGCTCGACCTGGACCTAGACCCAGATTCTAAATGGGTGGTGG
CCGAGGAGAAACGACGCACCGTGTGGATGGCCTACATAATGGACTGTTCC
CTAAATTTACGCCATAAGGGCTCTCTCACCCTGACCGAGCAAGCGCTGAC
CCGACTCCCCATGCCCGAGAGTGAATTCCAATGTGGTCACCCTATTTCAA
TGGGCTTTTTGGCCGAAGCACTCGCGGGTACGGATATTACCAGTCCCCTA
TCCTCCTTTGCTAAATGTATCCTGCTAGCCACTATCAGTGGCCGCACTCT
GTCACACCGCCATCTATCCATGGCTGAGCTCCTCCGAGGAAATCCGCTTC
AGGATGTCTGGACTCGCCATCAGTGGATCGACACGACGCTCACAGCCCAC
CTGCAGCTAAGCTTTTCGCTTCCCACGGCCGCGGAATCCAGCGACCCTAT
GCTCCTGTTTGCCAAGATGATCGGGCAAGCGGGTGTCCTCTCCCTGTATG
ACATCCTCCAGTCCACGCCCTGGGAGCCCGAAACAGTCAGCCTCCTACCC
GACTACGAGGCATGCGCGCTCCAGGCGGCCCGCGAGACTGTCGTTCTAGC
ACGTAATCTACGCCATTTCAGCTGCTTCAAGGTGCATCCCTTCACTCCTA
TTCTACTAGGCCTATGTGCAGAGGTATTGCAGCACCCTGTTGCCCATAAT
GATACCCCAAAGCTGTTAGGGGAGGTGCAGGACGCCTTGAAATATTTGAT
GACTGTGAATCGATTGGCTCGACAGGAAGCAGCAGCTCAGGACATCCGCC
GGTCATGACCACCCTCGAGCGGTGTCTTCTGGAGCAGCGCGATGGCATGC
TCGTTGATCCCATCTCGGACGATGAGCTGCTGGATAAAGCGCTGTCCGCC
TCTTCGCCAGCTTCCCAGTCCCCGGACCCCTCTGAGGAAGTATCCGAAAA
CATTCTGGAAGACCTATGTCAGACTCCCGAACCACAACCACCAAAAACAA
CACTACAAACCACAAGACCTCGCGCCAGGGCCCTGGTTCGGCCTGTGAGG
AATGCCGTCGCCGGAAGCTACGGTGCGACCGCCAGCCGCAGTGTCAGAAC
TGCGTTGATGCTGGTGTTTATTGTGTCACCAACCTTGCACGCCCGGCGCG
TGGTCCAAAGAAGGGTCATCTAAAGGCCTTGAAGGGCCGCATCGGGACCA
GGTGTTTTTCGAGCGCGTCCAGCCGATGGTCCCCATATTGCAACGCCATC
GATACTTTTCCTGGGCACGGGAACCTCAGCAATCGGCAAACCGACGGGGG
CTGCAGCAGGCTATTCGCACGCTGGCCGCTGGCGTGAGTAGCCAGTTGCC
CGAGGTACGCGTAGCACTGTATCGGACCACGCGCCACACACTGGAGTCCC
TCGAGTCGGACGACACTTTGTTGACAGCCCCGGATTTCGAGCAGGTGCAA
GCGTGGATCCTCATCGCCATTTACGAGTTTATGCAGGTCTCATACTCTCG
CGGCTGGATGAGCGCCGGTCGTGTATTCCGACTAGTGCAGCTGCTGCGCC
TGCCGGAGATAGACGCTTCGCCTCTTTCGCTGCTCGACCTGGACCTAGAC
CCAGATTCTAAATGGGTGGTGGCCGAGGAGAAACGACGCACCGTGTGGAT
GGCCTACATAATGGACTGTTCCCTAAATTTACGCCATAAGGGCTCTCTCA
CCCTGACCGAGCAAGCGCTGACCCGACTCCCCATGCCCGAGAGTGAATTC
CAATGTGGTCACCCTATTTCAATGGGCTTTTTGGCCGAAGCACTCGCGGG
TACGGATATTACCAGTCCCCTATCCTCCTTTGCTAAATGTATCCTGCTAG
CCACTATCAGTGGCCGCACTCTGTCACACCGCCATCTATCCATGGCTGAG
CTCCTCCGAGGAAATCCGCTTCAGGATGTCTGGACTCGCCATCAGTGGAT
CGACACGACGCTCACAGCCCACCTGCAGCTAAGCTTTTCGCTTCCCACGG
CCGCGGAATCCAGCGACCCTATGCTCCTGTTTGCCAAGATGATCGGGCAA
GCGGGTGTCCTCTCCCTGTATGACATCCTCCAGTCCACGCCCTGGGAGCC
CGAAACAGTCAGCCTCCTACCCGACTACGAGGCATGCGCGCTCCAGGCGG
CCCGCGAGACTGTCGTTCTAGCACGTAATCTACGCCATTTCAGCTGCTTC
AAGGTGCATCCCTTCACTCCTATTCTACTAGGCCTATGTGCAGAGGTATT
GCAGCACCCTGTTGCCCATAATGATACCCCAAAGCTGTTAGGGGAGGTGC
AGGACGCCTTGAAATATTTGATGACTGTGAATCGATTGGCTCGACAGGAA
GCAGCAGCTCAGGACATCCGCCGGTCATGACCACCCTCGAGCGGTGTCTT
CTGGAGCAGCGCGATGGCATGCTCGTTGATCCCATCTCGGACGATGAGCT
GCTGGATAAAGCGCTGTCCGCCTCTTCGCCAGCTTCCCAGTCCCCGGACC
CCTCTGAGGAAGTATCCGAAAACATTCTGGAAGACCTATGTCAGACTCCC
GAACCACAACCACCAAAAACAACACTACAAACCACAAGACCTCGCGCCAG
GGCCCTGGTTCGGCCTGTGAGGAATGCCGTCGCCGGAAGCTACGGTGCGA
CCGCCAGCCGCAGTGTCAGAACTGCGTTGATGCTGGTGTTTATTGTGTCA
CCAACCTTGCACGCCCGGCGCGTGGTCCAAAGAAGGGTCATCTAAAGGCC
TTGAAGGGCCGCATCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.3 |
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:393847..395538 - |
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